RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT1	YKL145W	BUD22	Q04347	519 aa	Known RBP	5.5	□□□□□ -1.53
RPT1	YKL145W	YET3	Q07451	203 aa		5.5	□□□□□ -1.53
RPT1	YKL145W	SLD7	Q08457	257 aa		5.5	□□□□□ -1.53
RPT1	YKL145W	PDH1	Q12428	516 aa	Known RBP	5.5	□□□□□ -1.53
RPT1	YKL145W	HRP1	Q99383	534 aa	Known RBP	5.5	□□□□□ -1.53
RPT1	YKL145W	SOD2	P00447	233 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	GPA2	P10823	449 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	RRP7	P25368	297 aa	Predicted RBP	5.49	□□□□□ -1.53
RPT1	YKL145W	YCR051W	P25631	222 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	PRE2	P30656	287 aa	Known RBP	5.49	□□□□□ -1.53
RPT1	YKL145W	KAR9	P32526	644 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	STB6	P36085	766 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	GEX2	P36173	615 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	GDT1	P38301	280 aa	Predicted RBP	5.49	□□□□□ -1.53
RPT1	YKL145W	GET2	P40056	285 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	RGI2	P40188	164 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	AMA1	P50082	593 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	BIO4	P53630	237 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	INN1	P53901	409 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	TOF2	Q02208	771 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	RLI1	Q03195	608 aa	Known RBP	5.49	□□□□□ -1.53
RPT1	YKL145W	HOT1	Q03213	719 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	RTN1	Q04947	295 aa	Known RBP	5.49	□□□□□ -1.53
RPT1	YKL145W	FAR8	Q05040	523 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	NCA2	Q12374	616 aa		5.49	□□□□□ -1.53
RPT1	YKL145W	RBK1	P25332	333 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	SMI1	P32566	505 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	GDA1	P32621	518 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	MRPL40	P36534	297 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	GDI1	P39958	451 aa	Known RBP	5.48	□□□□□ -1.53
RPT1	YKL145W	ELO3	P40319	345 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	MET28	P40573	187 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	TRS85	P46944	698 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	GLO1	P50107	326 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	ARI1	P53111	347 aa	Known RBP	5.48	□□□□□ -1.53
RPT1	YKL145W	CDC14	Q00684	551 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	YPL108W	Q02872	168 aa	Predicted RBP	5.48	□□□□□ -1.53
RPT1	YKL145W	FDC1	Q03034	503 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	YMR206W	Q03695	313 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	SEG1	Q04279	960 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	TMN2	Q04562	672 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	YLR012C	Q07927	99 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	NDD1	Q08887	554 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	YLR053C	Q12026	108 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	SWM1	Q12379	170 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	YDR034W-B	Q6Q5X2	51 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	ARF2	P19146	181 aa	Known RBP	5.48	□□□□□ -1.53
RPT1	YKL145W	CLN1	P20437	546 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	SEC14	P24280	304 aa	Known RBP	5.48	□□□□□ -1.53
RPT1	YKL145W	CLB1	P24868	471 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	RPN2	P32565	945 aa	Known RBP	5.48	□□□□□ -1.53
RPT1	YKL145W	COY1	P34237	679 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	POL12	P38121	705 aa	Predicted RBP	5.48	□□□□□ -1.53
RPT1	YKL145W	REV7	P38927	245 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	YJL206C	P39529	758 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	ARB1	P40024	610 aa	Known RBP	5.48	□□□□□ -1.53
RPT1	YKL145W	SLZ1	P40167	298 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	TAO3	P40468	2376 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	TEX1	P53851	422 aa	Known RBP	5.48	□□□□□ -1.53
RPT1	YKL145W	SLT2	Q00772	484 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	MRS2	Q01926	470 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	YVH1	Q02256	364 aa	Known RBP	5.48	□□□□□ -1.53
RPT1	YKL145W	OAZ1	Q02803	292 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	RNY1	Q02933	434 aa	Known RBP	5.48	□□□□□ -1.53
RPT1	YKL145W	SSY1	Q03770	852 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	CDC123	Q05791	360 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	YSH1	Q06224	779 aa	Predicted RBP	5.48	□□□□□ -1.53
RPT1	YKL145W	LDB18	Q07887	179 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	NUS1	Q12063	375 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	NFI1	Q12216	726 aa		5.48	□□□□□ -1.53
RPT1	YKL145W	CET1	O13297	549 aa	Predicted RBP	5.47	□□□□□ -1.53
RPT1	YKL145W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	5.47	□□□□□ -1.53	not detected
RPT1	YKL145W	VPS33	P20795	691 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	MRPL8	P22353	238 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	AAT2	P23542	418 aa	Known RBP	5.47	□□□□□ -1.53
RPT1	YKL145W	DCC1	P25559	380 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	DCG1	P32460	244 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	CYM1	P32898	989 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	YBR032W	P38223	100 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	YBR062C	P38239	180 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	YHI9	P38765	294 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	MED6	P38782	295 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	LIN1	P38852	340 aa	Predicted RBP	5.47	□□□□□ -1.53
RPT1	YKL145W	MEF2	P39677	819 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	PAN6	P40459	309 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	MET12	P46151	657 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	COS12	P53053	380 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	STR3	P53101	465 aa	Known RBP	5.47	□□□□□ -1.53
RPT1	YKL145W	ART5	P53244	586 aa	Known RBP	5.47	□□□□□ -1.53
RPT1	YKL145W	NUP100	Q02629	959 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	CLU1	Q03690	1277 aa	Known RBP	5.47	□□□□□ -1.53
RPT1	YKL145W	STP3	Q05937	343 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	CMS1	Q07897	291 aa	Known RBP	5.47	□□□□□ -1.53
RPT1	YKL145W	SPE4	Q12455	300 aa		5.47	□□□□□ -1.53
RPT1	YKL145W	CYC1	P00044	109 aa	Predicted RBP	5.46	□□□□□ -1.54
RPT1	YKL145W	SEC12	P11655	471 aa		5.46	□□□□□ -1.54
RPT1	YKL145W	SCH9	P11792	824 aa	Known RBP	5.46	□□□□□ -1.54
RPT1	YKL145W	THR1	P17423	357 aa	Known RBP	5.46	□□□□□ -1.54
RPT1	YKL145W	DAL81	P21657	970 aa		5.46	□□□□□ -1.54
RPT1	YKL145W	BEM1	P29366	551 aa		5.46	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 82.1 ms