RNA–Protein interactions for RNA: YDR510W

SMT3, Transcript of Ubiquitin-like protein of the SUMO family, yeast

Gene SMT3, Length 306 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMT3	YDR510W	GPI16	P38875	610 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	END3	P39013	349 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	NDC80	P40460	691 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	IAH1	P41734	238 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	TFG2	P41896	400 aa	Predicted RBP	3.16	□□□□□ -1.9
SMT3	YDR510W	YFL015C	P43578	164 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	BRO1	P48582	844 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	MNN10	P50108	393 aa	Known RBP	3.16	□□□□□ -1.9
SMT3	YDR510W	PIB2	P53191	635 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	YPR003C	P53394	754 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	MPP6	P53725	186 aa	Predicted RBP	3.16	□□□□□ -1.9
SMT3	YDR510W	HEF3	P53978	1044 aa	Known RBP	3.16	□□□□□ -1.9
SMT3	YDR510W	SMX3	P54999	86 aa	Predicted RBP	3.16	□□□□□ -1.9
SMT3	YDR510W	SEG1	Q04279	960 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	MDM30	Q05930	598 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	RAD34	Q06665	692 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	THI3	Q07471	609 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	THP1	Q08231	455 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	NTO1	Q12311	748 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	YOR012W	Q12351	137 aa		3.16	□□□□□ -1.9
SMT3	YDR510W	ADE4	P04046	510 aa	Known RBP	3.15	□□□□□ -1.91
SMT3	YDR510W	PPR1	P07272	904 aa	Predicted RBP	3.15	□□□□□ -1.91
SMT3	YDR510W	RNR2	P09938	399 aa	Known RBP	3.15	□□□□□ -1.91
SMT3	YDR510W	SEC63	P14906	663 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	CNA1	P23287	553 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	PSO2	P30620	661 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	SAC1	P32368	623 aa	Known RBP	3.15	□□□□□ -1.91
SMT3	YDR510W	ECM25	P32525	599 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	PPS1	P38148	807 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	DUG2	P38149	878 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	BNA4	P38169	460 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	RRN10	P38204	145 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	KAP104	P38217	918 aa	Known RBP	3.15	□□□□□ -1.91
SMT3	YDR510W	ERG7	P38604	731 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	CBR1	P38626	284 aa	Known RBP	3.15	□□□□□ -1.91
SMT3	YDR510W	RFC3	P38629	340 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	DED81	P38707	554 aa	Known RBP	3.15	□□□□□ -1.91
SMT3	YDR510W	BZZ1	P38822	633 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	STN1	P38960	494 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	MIT1	P40002	666 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	SNG1	P46950	547 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	TAX4	P47030	604 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	YHC3	P47040	408 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	RIM8	P53179	542 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	YTP1	P53584	459 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	APM1	Q00776	475 aa	Predicted RBP	3.15	□□□□□ -1.91
SMT3	YDR510W	SPO19	Q03029	223 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	CSI1	Q04368	295 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	YLR455W	Q06188	304 aa		3.15	□□□□□ -1.91
SMT3	YDR510W	NCE102	Q12207	173 aa	RIP-Chip data	3.15	□□□□□ -1.91	not detected
SMT3	YDR510W	PMA1	P05030	918 aa	Known RBP	3.14	□□□□□ -1.91
SMT3	YDR510W	UGA1	P17649	471 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	SEC62	P21825	274 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	TKL1	P23254	680 aa	Known RBP	3.14	□□□□□ -1.91
SMT3	YDR510W	CLB2	P24869	491 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	HSP104	P31539	908 aa	Known RBP	3.14	□□□□□ -1.91
SMT3	YDR510W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
SMT3	YDR510W	YSC83	P32792	385 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	COT1	P32798	439 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	LIP5	P32875	414 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	RPC34	P32910	317 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	TSA1	P34760	196 aa	Known RBP	3.14	□□□□□ -1.91
SMT3	YDR510W	SOR1	P35497	357 aa	Known RBP	3.14	□□□□□ -1.91
SMT3	YDR510W	YKT6	P36015	200 aa	Known RBP	3.14	□□□□□ -1.91
SMT3	YDR510W	MIA40	P36046	403 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	YKL070W	P36087	169 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	YKL023W	P36103	277 aa	Known RBP	3.14	□□□□□ -1.91
SMT3	YDR510W	SPP381	P38282	291 aa	Predicted RBP	3.14	□□□□□ -1.91
SMT3	YDR510W	SWC5	P38326	303 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	ARP1	P38696	384 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	PCL5	P38794	229 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	BDH2	P39713	417 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	CDC1	P40986	491 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	TDA10	P42938	290 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	EMC2	P47133	292 aa	Known RBP	3.14	□□□□□ -1.91
SMT3	YDR510W	ECL1	P48235	211 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	PYK2	P52489	506 aa	Known RBP	3.14	□□□□□ -1.91
SMT3	YDR510W	YGL242C	P53066	181 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	YGL185C	P53100	379 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	MND1	P53102	219 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	YGL117W	P53133	265 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	YGL114W	P53134	725 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	DRN1	P53255	507 aa	Known RBP	3.14	□□□□□ -1.91
SMT3	YDR510W	CPR8	P53728	308 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	DUG3	P53871	357 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	YVH1	Q02256	364 aa	Known RBP	3.14	□□□□□ -1.91
SMT3	YDR510W	ATC1	Q04005	294 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	ERV41	Q04651	352 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	YPR078C	Q06813	372 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	SOR2	Q07786	357 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	YOR365C	Q08844	703 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	YLR049C	Q12110	428 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
SMT3	YDR510W	RUP1	Q12242	671 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	LDB17	Q12342	491 aa		3.14	□□□□□ -1.91
SMT3	YDR510W	RPL7A	P05737	244 aa	Known RBP	3.13	□□□□□ -1.91
SMT3	YDR510W	GPA1	P08539	472 aa		3.13	□□□□□ -1.91
SMT3	YDR510W	SSA3	P09435	649 aa	Known RBP	3.13	□□□□□ -1.91
SMT3	YDR510W	NFT1	P0CE68	1218 aa		3.13	□□□□□ -1.91
SMT3	YDR510W	MAS1	P10507	462 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms