RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W PCF11P39081 626 aaPredicted RBP1.33□□□□□ -2.2
MSN5YDR335W YFR020WP43600 232 aa1.33□□□□□ -2.2
MSN5YDR335W AAD10P47182 288 aa1.33□□□□□ -2.2
MSN5YDR335W YKE2P52553 114 aa1.33□□□□□ -2.2
MSN5YDR335W ACL4Q03771 387 aa1.33□□□□□ -2.2
MSN5YDR335W EMI2Q04409 500 aaKnown RBP1.33□□□□□ -2.2
MSN5YDR335W VTA1Q06263 330 aa1.33□□□□□ -2.2
MSN5YDR335W CUR1Q06469 252 aa1.33□□□□□ -2.2
MSN5YDR335W YLL058WQ12198 575 aa1.33□□□□□ -2.2
MSN5YDR335W ADF1Q2V2Q1 113 aa1.33□□□□□ -2.2
MSN5YDR335W IKI3Q06706 1349 aaKnown RBP1.33□□□□□ -2.2
MSN5YDR335W BNR1P40450 1375 aa1.33□□□□□ -2.2
MSN5YDR335W CBP2P03874 630 aaPredicted RBP1.33□□□□□ -2.2
MSN5YDR335W ARG81P05085 880 aa1.33□□□□□ -2.2
MSN5YDR335W SPE1P08432 466 aa1.33□□□□□ -2.2
MSN5YDR335W RSR1P13856 272 aa1.33□□□□□ -2.2
MSN5YDR335W SEC63P14906 663 aa1.33□□□□□ -2.2
MSN5YDR335W IME1P21190 360 aa1.33□□□□□ -2.2
MSN5YDR335W UBA1P22515 1024 aaKnown RBP1.33□□□□□ -2.2
MSN5YDR335W FEN2P25621 512 aaKnown RBP1.33□□□□□ -2.2
MSN5YDR335W PRS1P32895 427 aaKnown RBP1.33□□□□□ -2.2
MSN5YDR335W YKL070WP36087 169 aa1.33□□□□□ -2.2
MSN5YDR335W GDT1P38301 280 aaPredicted RBP1.33□□□□□ -2.2
MSN5YDR335W ANS1P38832 159 aa1.33□□□□□ -2.2
MSN5YDR335W ARO9P38840 513 aaPredicted RBP1.33□□□□□ -2.2
MSN5YDR335W NUP60P39705 539 aa1.33□□□□□ -2.2
MSN5YDR335W BNA3P47039 444 aaKnown RBP1.33□□□□□ -2.2
MSN5YDR335W MRK1P50873 501 aa1.33□□□□□ -2.2
MSN5YDR335W IMA1P53051 589 aa1.33□□□□□ -2.2
MSN5YDR335W YIF1P53845 314 aaKnown RBP1.33□□□□□ -2.2
MSN5YDR335W RLI1Q03195 608 aaKnown RBP1.33□□□□□ -2.2
MSN5YDR335W EKI1Q03764 534 aa1.33□□□□□ -2.2
MSN5YDR335W MSS11Q03825 758 aa1.33□□□□□ -2.2
MSN5YDR335W CAB5Q03941 241 aa1.33□□□□□ -2.2
MSN5YDR335W BNA7Q04066 261 aa1.33□□□□□ -2.2
MSN5YDR335W SMP3Q04174 516 aa1.33□□□□□ -2.2
MSN5YDR335W YLH47Q06493 454 aa1.33□□□□□ -2.2
MSN5YDR335W GPN3Q06543 272 aa1.33□□□□□ -2.2
MSN5YDR335W ATG23Q06671 453 aa1.33□□□□□ -2.2
MSN5YDR335W NUP157P40064 1391 aaKnown RBP1.33□□□□□ -2.2
MSN5YDR335W PDR11P40550 1411 aa1.33□□□□□ -2.2
MSN5YDR335W RSF2P46974 1380 aa1.33□□□□□ -2.2
MSN5YDR335W RAV1P47104 1357 aa1.33□□□□□ -2.2
MSN5YDR335W RPS16AP0CX51 143 aaKnown RBP1.33□□□□□ -2.2
MSN5YDR335W RPS16BP0CX52 143 aaKnown RBP1.33□□□□□ -2.2
MSN5YDR335W RAP1P11938 827 aa1.33□□□□□ -2.2
MSN5YDR335W ABF1P14164 731 aa1.33□□□□□ -2.2
MSN5YDR335W RPB8P20436 146 aa1.33□□□□□ -2.2
MSN5YDR335W PDE1P22434 369 aa1.33□□□□□ -2.2
MSN5YDR335W CDC20P26309 610 aa1.33□□□□□ -2.2
MSN5YDR335W MSS51P32335 436 aa1.33□□□□□ -2.2
MSN5YDR335W SSE2P32590 693 aaKnown RBP1.33□□□□□ -2.2
MSN5YDR335W RML2P32611 393 aa1.33□□□□□ -2.2
MSN5YDR335W RTC2P38279 296 aa1.33□□□□□ -2.2
MSN5YDR335W VHC1P38329 1120 aa1.33□□□□□ -2.2
MSN5YDR335W MSR1P38714 643 aa1.33□□□□□ -2.2
MSN5YDR335W RPP1P38786 293 aa1.33□□□□□ -2.2
MSN5YDR335W YHR182WP38870 785 aa1.33□□□□□ -2.2
MSN5YDR335W YHR210CP38893 341 aa1.33□□□□□ -2.2
MSN5YDR335W PLB1P39105 664 aa1.33□□□□□ -2.2
MSN5YDR335W NMA2P53204 395 aa1.33□□□□□ -2.2
MSN5YDR335W DRN1P53255 507 aaKnown RBP1.33□□□□□ -2.2
MSN5YDR335W CSL4P53859 292 aaPredicted RBP1.33□□□□□ -2.2
MSN5YDR335W YAT1P80235 687 aa1.33□□□□□ -2.2
MSN5YDR335W MUK1Q02866 612 aa1.33□□□□□ -2.2
MSN5YDR335W PRM15Q03262 622 aa1.33□□□□□ -2.2
MSN5YDR335W USA1Q03714 838 aa1.33□□□□□ -2.2
MSN5YDR335W YFT2Q06676 274 aa1.33□□□□□ -2.2
MSN5YDR335W TPO1Q07824 586 aa1.33□□□□□ -2.2
MSN5YDR335W RRI1Q12468 440 aa1.33□□□□□ -2.2
MSN5YDR335W SKS1Q12505 502 aa1.33□□□□□ -2.2
MSN5YDR335W YLR415CO13578 112 aa1.32□□□□□ -2.2
MSN5YDR335W MSF1P08425 469 aa1.32□□□□□ -2.2
MSN5YDR335W MATALPHA2P0CY08 210 aa1.32□□□□□ -2.2
MSN5YDR335W HMLALPHA2P0CY09 210 aa1.32□□□□□ -2.2
MSN5YDR335W BIK1P11709 440 aa1.32□□□□□ -2.2
MSN5YDR335W UGA1P17649 471 aa1.32□□□□□ -2.2
MSN5YDR335W KGD1P20967 1014 aaKnown RBP1.32□□□□□ -2.2
MSN5YDR335W YCR015CP25616 317 aa1.32□□□□□ -2.2
MSN5YDR335W CIN8P27895 1000 aa1.32□□□□□ -2.2
MSN5YDR335W PPA2P28239 310 aa1.32□□□□□ -2.2
MSN5YDR335W ITR1P30605 584 aa1.32□□□□□ -2.2
MSN5YDR335W RPC37P36121 282 aa1.32□□□□□ -2.2
MSN5YDR335W CBP4P37267 147 aa1.32□□□□□ -2.2
MSN5YDR335W YBR259WP38338 688 aa1.32□□□□□ -2.2
MSN5YDR335W ERG7P38604 731 aa1.32□□□□□ -2.2
MSN5YDR335W CBR1P38626 284 aaKnown RBP1.32□□□□□ -2.2
MSN5YDR335W FET3P38993 636 aa1.32□□□□□ -2.2
MSN5YDR335W SSO2P39926 295 aa1.32□□□□□ -2.2
MSN5YDR335W PIG2P40187 538 aa1.32□□□□□ -2.2
MSN5YDR335W SHQ1P40486 507 aaPredicted RBP1.32□□□□□ -2.2
MSN5YDR335W ULP2P40537 1034 aaPredicted RBP1.32□□□□□ -2.2
MSN5YDR335W BRO1P48582 844 aa1.32□□□□□ -2.2
MSN5YDR335W MPS2P53159 387 aa1.32□□□□□ -2.2
MSN5YDR335W PEF1P53238 335 aa1.32□□□□□ -2.2
MSN5YDR335W RSM23Q01163 450 aa1.32□□□□□ -2.2
MSN5YDR335W AIM6Q07716 390 aa1.32□□□□□ -2.2
MSN5YDR335W TEN1Q07921 160 aa1.32□□□□□ -2.2
MSN5YDR335W AIM39Q08223 395 aa1.32□□□□□ -2.2
MSN5YDR335W FRE7Q12333 620 aa1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms