RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	PFA5	Q03289	374 aa		3.35	□□□□□ -1.87
CMD1	YBR109C	SEG1	Q04279	960 aa		3.35	□□□□□ -1.87
CMD1	YBR109C	YMR027W	Q04371	470 aa		3.35	□□□□□ -1.87
CMD1	YBR109C	PIG1	Q06216	648 aa		3.35	□□□□□ -1.87
CMD1	YBR109C	YPL272C	Q08984	517 aa		3.35	□□□□□ -1.87
CMD1	YBR109C	YLR049C	Q12110	428 aa		3.35	□□□□□ -1.87
CMD1	YBR109C	NMD4	Q12129	218 aa		3.35	□□□□□ -1.87
CMD1	YBR109C	SPE4	Q12455	300 aa		3.35	□□□□□ -1.87
CMD1	YBR109C	RTP1	Q12751	981 aa		3.35	□□□□□ -1.87
CMD1	YBR109C	FLO1	P32768	1537 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	GAL4	P04386	881 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	RPS3	P05750	240 aa	Known RBP	3.34	□□□□□ -1.87
CMD1	YBR109C	NAT1	P12945	854 aa	Known RBP	3.34	□□□□□ -1.87
CMD1	YBR109C	TAL1	P15019	335 aa	Known RBP	3.34	□□□□□ -1.87
CMD1	YBR109C	KRS1	P15180	591 aa	Known RBP	3.34	□□□□□ -1.87
CMD1	YBR109C	CLB3	P24870	427 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	STE50	P25344	346 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	POL4	P25615	582 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	CMK1	P27466	446 aa	Known RBP	3.34	□□□□□ -1.87
CMD1	YBR109C	SIN4	P32259	974 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	MNN2	P38069	597 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	YBR225W	P38321	900 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	VHC1	P38329	1120 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	RRT2	P38332	387 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	HSM3	P38348	480 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	END3	P39013	349 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	UIP3	P39547	235 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	YNL320W	P42840	284 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	DPB11	P47027	764 aa	Predicted RBP	3.34	□□□□□ -1.87
CMD1	YBR109C	MRX6	P48564	524 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	FMS1	P50264	508 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	YML6	P51998	286 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	STR3	P53101	465 aa	Known RBP	3.34	□□□□□ -1.87
CMD1	YBR109C	LIF1	P53150	421 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	HOP2	P53187	214 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	NNF2	P53253	936 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	ARE2	P53629	642 aa	Known RBP	3.34	□□□□□ -1.87
CMD1	YBR109C	KTR5	P53966	522 aa	Predicted RBP	3.34	□□□□□ -1.87
CMD1	YBR109C	TIM8	P57744	87 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	RPA49	Q01080	415 aa	Predicted RBP	3.34	□□□□□ -1.87
CMD1	YBR109C	YML037C	Q03703	340 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	TSR2	Q06672	205 aa	Known RBP	3.34	□□□□□ -1.87
CMD1	YBR109C	SMC5	Q08204	1093 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	ABP140	Q08641	628 aa	Known RBP	3.34	□□□□□ -1.87
CMD1	YBR109C	INP53	Q12271	1107 aa		3.34	□□□□□ -1.87
CMD1	YBR109C	RRP36	Q12481	300 aa	Predicted RBP	3.34	□□□□□ -1.87
CMD1	YBR109C	CDC31	P06704	161 aa	Known RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	TKL1	P23254	680 aa	Known RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	VMA16	P23968	213 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	RPL5	P26321	297 aa	Known RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	RPC19	P28000	142 aa	Known RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	YSC83	P32792	385 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	AGP2	P38090	596 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	YBL028C	P38202	106 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	PCA1	P38360	1216 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	HMF1	P40037	129 aa	Known RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	YMR134W	P40207	237 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	GVP36	P40531	326 aa	Known RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	ULP2	P40537	1034 aa	Predicted RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	SEC27	P41811	889 aa	Known RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	TMA22	P47089	198 aa	Predicted RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	VMA10	P48836	114 aa	Known RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	LCL3	P53153	274 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	RBG2	P53295	368 aa	Known RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	YTP1	P53584	459 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	LSC1	P53598	329 aa	Known RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	COP1	P53622	1201 aa	Known RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	DSL1	P53847	754 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	ASI1	P54074	624 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	ERG13	P54839	491 aa	Known RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	SXM1	Q04175	944 aa	Known RBP	3.33	□□□□□ -1.88
CMD1	YBR109C	TDA9	Q04545	1251 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	PRM6	Q04705	352 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	MFB1	Q04922	465 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	IVY1	Q04934	453 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	SIL1	Q08199	421 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	FRE3	Q08905	711 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	RUP1	Q12242	671 aa		3.33	□□□□□ -1.88
CMD1	YBR109C	INH1	P01097	85 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	GCN4	P03069	281 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	YML002W	P0CF17	737 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	RAP1	P11938	827 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	YAP1	P19880	650 aa	Known RBP	3.32	□□□□□ -1.88
CMD1	YBR109C	CNA1	P23287	553 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	CLB2	P24869	491 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	ADH7	P25377	361 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	YIH1	P25637	258 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	VPH2	P32341	215 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	SAC1	P32368	623 aa	Known RBP	3.32	□□□□□ -1.88
CMD1	YBR109C	MUD1	P32605	298 aa	Known RBP	3.32	□□□□□ -1.88
CMD1	YBR109C	YME2	P32843	850 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	COY1	P34237	679 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	MSG5	P38590	489 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	SPC97	P38863	823 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	CCT6	P39079	546 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	FRT2	P39734	528 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	ALG5	P40350	334 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	JEM1	P40358	645 aa		3.32	□□□□□ -1.88
CMD1	YBR109C	LIA1	P47120	325 aa	Known RBP	3.32	□□□□□ -1.88
CMD1	YBR109C	DIA3	P52290	468 aa		3.32	□□□□□ -1.88

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms