RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W YTA12P40341 825 aa2.09□□□□□ -2.07
SNC1YAL030W CSM2P40465 213 aa2.09□□□□□ -2.07
SNC1YAL030W SYG1P40528 902 aa2.09□□□□□ -2.07
SNC1YAL030W YIL024CP40543 189 aa2.09□□□□□ -2.07
SNC1YAL030W RPS0BP46654 252 aaKnown RBP2.09□□□□□ -2.07
SNC1YAL030W YJR011CP47086 261 aaPredicted RBP2.09□□□□□ -2.07
SNC1YAL030W YPT11P48559 417 aa2.09□□□□□ -2.07
SNC1YAL030W GPI1P53306 609 aa2.09□□□□□ -2.07
SNC1YAL030W BUD32P53323 261 aa2.09□□□□□ -2.07
SNC1YAL030W YNL234WP53857 426 aa2.09□□□□□ -2.07
SNC1YAL030W EKI1Q03764 534 aa2.09□□□□□ -2.07
SNC1YAL030W PPM1Q04081 328 aa2.09□□□□□ -2.07
SNC1YAL030W SEG1Q04279 960 aa2.09□□□□□ -2.07
SNC1YAL030W HSP31Q04432 237 aa2.09□□□□□ -2.07
SNC1YAL030W YDR341CQ05506 607 aaKnown RBP2.09□□□□□ -2.07
SNC1YAL030W YFH1Q07540 174 aa2.09□□□□□ -2.07
SNC1YAL030W DIS3Q08162 1001 aaKnown RBP2.09□□□□□ -2.07
SNC1YAL030W THI20Q08224 551 aa2.09□□□□□ -2.07
SNC1YAL030W LSP1Q12230 341 aaKnown RBP2.09□□□□□ -2.07
SNC1YAL030W NDJ1Q12366 352 aa2.09□□□□□ -2.07
SNC1YAL030W TFB5Q3E7C1 72 aaPredicted RBP2.09□□□□□ -2.07
SNC1YAL030W NBL1Q3E7Y6 73 aa2.09□□□□□ -2.07
SNC1YAL030W MES1P00958 751 aaKnown RBP2.08□□□□□ -2.08
SNC1YAL030W ADE4P04046 510 aaKnown RBP2.08□□□□□ -2.08
SNC1YAL030W LEU4P06208 619 aaKnown RBP2.08□□□□□ -2.08
SNC1YAL030W YER190C-BP0CX94 160 aa2.08□□□□□ -2.08
SNC1YAL030W YEL077W-AP0CX95 160 aa2.08□□□□□ -2.08
SNC1YAL030W YGR296C-BP0CX96 160 aa2.08□□□□□ -2.08
SNC1YAL030W YPL283W-BP0CX97 160 aa2.08□□□□□ -2.08
SNC1YAL030W YPR204C-AP0CX98 160 aa2.08□□□□□ -2.08
SNC1YAL030W PMR1P13586 950 aa2.08□□□□□ -2.08
SNC1YAL030W GLK1P17709 500 aaKnown RBP2.08□□□□□ -2.08
SNC1YAL030W EXO70P19658 623 aa2.08□□□□□ -2.08
SNC1YAL030W YAP1P19880 650 aaKnown RBP2.08□□□□□ -2.08
SNC1YAL030W RHB1P25378 209 aa2.08□□□□□ -2.08
SNC1YAL030W RPS2P25443 254 aaKnown RBP2.08□□□□□ -2.08
SNC1YAL030W RAD24P32641 659 aa2.08□□□□□ -2.08
SNC1YAL030W MIC60P36112 540 aa2.08□□□□□ -2.08
SNC1YAL030W MRPL4P36517 319 aa2.08□□□□□ -2.08
SNC1YAL030W ASC1P38011 319 aaKnown RBP2.08□□□□□ -2.08
SNC1YAL030W YSW1P38280 609 aa2.08□□□□□ -2.08
SNC1YAL030W ERG7P38604 731 aa2.08□□□□□ -2.08
SNC1YAL030W WSS1P38838 269 aa2.08□□□□□ -2.08
SNC1YAL030W FAD1P38913 306 aa2.08□□□□□ -2.08
SNC1YAL030W ATF1P40353 525 aa2.08□□□□□ -2.08
SNC1YAL030W CHS6P40955 746 aa2.08□□□□□ -2.08
SNC1YAL030W PSA1P41940 361 aaKnown RBP2.08□□□□□ -2.08
SNC1YAL030W FET5P43561 622 aa2.08□□□□□ -2.08
SNC1YAL030W YGL082WP53155 381 aa2.08□□□□□ -2.08
SNC1YAL030W RHO5P53879 331 aaKnown RBP2.08□□□□□ -2.08
SNC1YAL030W OCA2P53949 197 aa2.08□□□□□ -2.08
SNC1YAL030W YDR541CQ03049 344 aa2.08□□□□□ -2.08
SNC1YAL030W SLD5Q03406 294 aa2.08□□□□□ -2.08
SNC1YAL030W RIM13Q03792 727 aa2.08□□□□□ -2.08
SNC1YAL030W MSS11Q03825 758 aa2.08□□□□□ -2.08
SNC1YAL030W IVY1Q04934 453 aa2.08□□□□□ -2.08
SNC1YAL030W GLO2Q05584 274 aa2.08□□□□□ -2.08
SNC1YAL030W BNA5Q05979 453 aa2.08□□□□□ -2.08
SNC1YAL030W DIC1Q06143 298 aa2.08□□□□□ -2.08
SNC1YAL030W DBP9Q06218 594 aaKnown RBP2.08□□□□□ -2.08
SNC1YAL030W GSH2Q08220 491 aa2.08□□□□□ -2.08
SNC1YAL030W ATX2Q12067 313 aa2.08□□□□□ -2.08
SNC1YAL030W BUG1Q12191 341 aa2.08□□□□□ -2.08
SNC1YAL030W YNL162W-AQ3E7A8 72 aa2.08□□□□□ -2.08
SNC1YAL030W SRN2Q99176 213 aa2.08□□□□□ -2.08
SNC1YAL030W TY1B-AO13527 1196 aaKnown RBP2.07□□□□□ -2.08
SNC1YAL030W COX3P00420 269 aa2.07□□□□□ -2.08
SNC1YAL030W HIS4P00815 799 aaKnown RBP2.07□□□□□ -2.08
SNC1YAL030W YPT1P01123 206 aaKnown RBP2.07□□□□□ -2.08
SNC1YAL030W AMD1P15274 810 aaKnown RBP2.07□□□□□ -2.08
SNC1YAL030W MDM10P18409 493 aa2.07□□□□□ -2.08
SNC1YAL030W DAP2P18962 818 aa2.07□□□□□ -2.08
SNC1YAL030W HNM1P19807 563 aa2.07□□□□□ -2.08
SNC1YAL030W TRX1P22217 103 aaKnown RBP2.07□□□□□ -2.08
SNC1YAL030W AIM17P23180 465 aaKnown RBP2.07□□□□□ -2.08
SNC1YAL030W FUN19P28003 413 aaPredicted RBP2.07□□□□□ -2.08
SNC1YAL030W HSP104P31539 908 aaKnown RBP2.07□□□□□ -2.08
SNC1YAL030W SMI1P32566 505 aa2.07□□□□□ -2.08
SNC1YAL030W VPS17P32913 551 aa2.07□□□□□ -2.08
SNC1YAL030W RRP1P35178 278 aaPredicted RBP2.07□□□□□ -2.08
SNC1YAL030W ECM15P35195 104 aa2.07□□□□□ -2.08
SNC1YAL030W SOR1P35497 357 aaKnown RBP2.07□□□□□ -2.08
SNC1YAL030W RRN10P38204 145 aa2.07□□□□□ -2.08
SNC1YAL030W GND1P38720 489 aaKnown RBP2.07□□□□□ -2.08
SNC1YAL030W RRF1P38771 230 aa2.07□□□□□ -2.08
SNC1YAL030W STN1P38960 494 aa2.07□□□□□ -2.08
SNC1YAL030W POP2P39008 433 aa2.07□□□□□ -2.08
SNC1YAL030W YMR124WP39523 943 aaKnown RBP2.07□□□□□ -2.08
SNC1YAL030W NAS2P40555 220 aa2.07□□□□□ -2.08
SNC1YAL030W YPS6P40583 537 aa2.07□□□□□ -2.08
SNC1YAL030W SAS2P40963 338 aa2.07□□□□□ -2.08
SNC1YAL030W POP1P41812 875 aa2.07□□□□□ -2.08
SNC1YAL030W EPL1P43572 832 aa2.07□□□□□ -2.08
SNC1YAL030W SCD6P45978 349 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08 RIP-Chip
SNC1YAL030W GUF1P46943 645 aa2.07□□□□□ -2.08
SNC1YAL030W DSL1P53847 754 aa2.07□□□□□ -2.08
SNC1YAL030W PDR16P53860 351 aaKnown RBP2.07□□□□□ -2.08
SNC1YAL030W KTR5P53966 522 aaPredicted RBP2.07□□□□□ -2.08
SNC1YAL030W SAM50P53969 484 aa2.07□□□□□ -2.08
SNC1YAL030W RPL15BP54780 204 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 85.2 ms