RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 SMCPP49901 116 aaPredicted RBP6.66□□□□□ -1.34
CASC19-260ENST00000641828 CHMP4BP1P59074 171 aa6.66□□□□□ -1.34
CASC19-260ENST00000641828 NEDD9Q14511 834 aa6.66□□□□□ -1.34
CASC19-260ENST00000641828 NECTIN1Q15223 517 aa6.66□□□□□ -1.34
CASC19-260ENST00000641828 ADCK5Q3MIX3 580 aa6.66□□□□□ -1.34
CASC19-260ENST00000641828 TNNI3KQ59H18 835 aa6.66□□□□□ -1.34
CASC19-260ENST00000641828 CWC27Q6UX04 472 aaKnown RBP6.66□□□□□ -1.34
CASC19-260ENST00000641828 ENGASEQ8NFI3 743 aa6.66□□□□□ -1.34
CASC19-260ENST00000641828 FBXO27Q8NI29 283 aa6.66□□□□□ -1.34
CASC19-260ENST00000641828 MIEF2Q96C03 454 aa6.66□□□□□ -1.34
CASC19-260ENST00000641828 ABHD17AQ96GS6 310 aa6.66□□□□□ -1.34
CASC19-260ENST00000641828 GPATCH3Q96I76 525 aa6.66□□□□□ -1.34
CASC19-260ENST00000641828 RNPC3Q96LT9 517 aaKnown RBP6.66□□□□□ -1.34
CASC19-260ENST00000641828 BICC1Q9H694 974 aaKnown RBP6.66□□□□□ -1.34
CASC19-260ENST00000641828 FAM204AQ9H8W3 233 aa6.66□□□□□ -1.34
CASC19-260ENST00000641828 TMEM39AQ9NV64 488 aa6.66□□□□□ -1.34
CASC19-260ENST00000641828 CRYBG1Q9Y4K1 1723 aa6.65□□□□□ -1.34
CASC19-260ENST00000641828 RPGRIP1LQ68CZ1 1315 aa6.65□□□□□ -1.34
CASC19-260ENST00000641828 LOC102724428A0A0B4J2F2 783 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 ANKRD65E5RJM6 399 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 IKBKBO14920 756 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 MYO1BO43795 1136 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 N4BP1O75113 896 aaKnown RBP6.65□□□□□ -1.35
CASC19-260ENST00000641828 HMOX1P09601 288 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 SIK1P57059 783 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 GPLD1P80108 840 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 ATP11AP98196 1134 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 RESTQ13127 1097 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 CASP8Q14790 479 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 DBN1Q16643 649 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 LRP10Q7Z4F1 713 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 WAPLQ7Z5K2 1190 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 CCDC84Q86UT8 332 aaPredicted RBP6.65□□□□□ -1.35
CASC19-260ENST00000641828 PRPF38AQ8NAV1 312 aaKnown RBP6.65□□□□□ -1.35
CASC19-260ENST00000641828 PI4K2BQ8TCG2 481 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 TRPM4Q8TD43 1214 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 AFAP1L1Q8TED9 768 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 SLC16A10Q8TF71 515 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 GATAD2BQ8WXI9 593 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 KAT2BQ92831 832 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 KIFC2Q96AC6 838 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 CABS1Q96KC9 395 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 PBX4Q9BYU1 374 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 MUC3BQ9H195 1237 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 MIR1-1HGQ9H1L0 117 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 ANKZF1Q9H8Y5 726 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 PCDHB5Q9Y5E4 795 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 CD163L1Q9NR16 1453 aa6.65□□□□□ -1.35
CASC19-260ENST00000641828 FAM221BA6H8Z2 402 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 CCDC85CA6NKD9 419 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 H3BQV1 296 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 J3QW42 95 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 CHL1O00533 1208 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 STX10O60499 249 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 CUTAO60888 179 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 IFIT2P09913 472 aaKnown RBP6.64□□□□□ -1.35
CASC19-260ENST00000641828 RDXP35241 583 aaKnown RBP6.64□□□□□ -1.35
CASC19-260ENST00000641828 AARSP49588 968 aaKnown RBP eCLIP6.64□□□□□ -1.35
CASC19-260ENST00000641828 ZNF157P51786 506 aaPredicted RBP6.64□□□□□ -1.35
CASC19-260ENST00000641828 PTSQ03393 145 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 TMEM132EQ6IEE7 984 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 FMNL3Q8IVF7 1028 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 SGSM3Q96HU1 749 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 WDR24Q96S15 920 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 SDF4Q9BRK5 362 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 VEZTQ9HBM0 779 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 STK26Q9P289 416 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 FAM169AQ9Y6X4 670 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 ITSN1Q15811 1721 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 ATXN2Q99700 1313 aaKnown RBP6.64□□□□□ -1.35
CASC19-260ENST00000641828 AKAP12Q02952 1782 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 ALS2Q96Q42 1657 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 PNMA6EA0A0J9YXQ4 647 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 SLC35F4A4IF30 521 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 ZBTB42B2RXF5 422 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 CHUKO15111 745 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 SHOX2O60902 331 aaPredicted RBP6.64□□□□□ -1.35
CASC19-260ENST00000641828 GPTP24298 496 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 ELF1P32519 619 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 EIF6P56537 245 aaKnown RBP6.64□□□□□ -1.35
CASC19-260ENST00000641828 IRX1P78414 480 aaPredicted RBP6.64□□□□□ -1.35
CASC19-260ENST00000641828 MPP2Q14168 576 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 PPP2R5AQ15172 486 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 PTPROQ16827 1216 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 COL24A1Q17RW2 1714 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 MAP9Q49MG5 647 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 PLEKHO1Q53GL0 409 aaPredicted RBP6.64□□□□□ -1.35
CASC19-260ENST00000641828 KCNV1Q6PIU1 500 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 SLC4A10Q6U841 1118 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 HFE2Q6ZVN8 426 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 HDGFL2Q7Z4V5 671 aaPredicted RBP6.64□□□□□ -1.35
CASC19-260ENST00000641828 FAM169BQ8N8A8 192 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 DHX58Q96C10 678 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 ZNF396Q96N95 335 aaPredicted RBP6.64□□□□□ -1.35
CASC19-260ENST00000641828 FERD3LQ96RJ6 166 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 JPH2Q9BR39 696 aaPredicted RBP6.64□□□□□ -1.35
CASC19-260ENST00000641828 CDC23Q9UJX2 597 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 THRAP3Q9Y2W1 955 aaKnown RBP6.64□□□□□ -1.35
CASC19-260ENST00000641828 SAMM50Q9Y512 469 aa6.64□□□□□ -1.35
CASC19-260ENST00000641828 N4BP2Q86UW6 1770 aaPredicted RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms