RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	MCAT	Q8IVS2	390 aa	Known RBP	7.93	□□□□□ -1.14
CASC19-238	ENST00000641523	SMG8	Q8ND04	991 aa	Known RBP	7.93	□□□□□ -1.14
CASC19-238	ENST00000641523	ZNF507	Q8TCN5	953 aa		7.93	□□□□□ -1.14
CASC19-238	ENST00000641523	SH3TC2	Q8TF17	1288 aa		7.93	□□□□□ -1.14
CASC19-238	ENST00000641523	RUNDC1	Q96C34	613 aa		7.93	□□□□□ -1.14
CASC19-238	ENST00000641523	THUMPD2	Q9BTF0	503 aa	Known RBP	7.93	□□□□□ -1.14
CASC19-238	ENST00000641523	CYP4F12	Q9HCS2	524 aa		7.93	□□□□□ -1.14
CASC19-238	ENST00000641523	RRP7A	Q9Y3A4	280 aa	Known RBP	7.93	□□□□□ -1.14
CASC19-238	ENST00000641523	RNF123	Q5XPI4	1314 aa		7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	ARHGEF15	O94989	841 aa		7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	HOXB7	P09629	217 aa		7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	HCLS1	P14317	486 aa	Predicted RBP	7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	HSD3B2	P26439	372 aa		7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	SOX4	Q06945	474 aa	Predicted RBP	7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	HSP90AB3P	Q58FF7	597 aa		7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	VHLL	Q6RSH7	139 aa		7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	RTKN2	Q8IZC4	609 aa		7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	AGGF1	Q8N302	714 aa	eCLIP	7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	C12orf50	Q8NA57	414 aa	Predicted RBP	7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	SMC1B	Q8NDV3	1235 aa		7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	ZNF775	Q96BV0	537 aa	Predicted RBP	7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	DPH2	Q9BQC3	489 aa	Predicted RBP	7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	ATXN3L	Q9H3M9	355 aa		7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	KLHL42	Q9P2K6	505 aa		7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	PFDN2	Q9UHV9	154 aa		7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	SLC12A7	Q9Y666	1083 aa		7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	RIC1	Q4ADV7	1423 aa		7.92	□□□□□ -1.14
CASC19-238	ENST00000641523	DLG5	Q8TDM6	1919 aa		7.91	□□□□□ -1.14
CASC19-238	ENST00000641523	TNRC6C	Q9HCJ0	1690 aa	Known RBP	7.91	□□□□□ -1.14
CASC19-238	ENST00000641523	MYL6B	P14649	208 aa		7.91	□□□□□ -1.14
CASC19-238	ENST00000641523	MTERF2	Q49AM1	385 aa		7.91	□□□□□ -1.14
CASC19-238	ENST00000641523	SLC6A19	Q695T7	634 aa		7.91	□□□□□ -1.14
CASC19-238	ENST00000641523	IGF2-AS	Q6U949	168 aa		7.91	□□□□□ -1.14
CASC19-238	ENST00000641523	SPATC1	Q76KD6	591 aa		7.91	□□□□□ -1.14
CASC19-238	ENST00000641523	PPP1R42	Q7Z4L9	355 aa		7.91	□□□□□ -1.14
CASC19-238	ENST00000641523	NGEF	Q8N5V2	710 aa		7.91	□□□□□ -1.14
CASC19-238	ENST00000641523	KIF2C	Q99661	725 aa		7.91	□□□□□ -1.14
CASC19-238	ENST00000641523	TMX4	Q9H1E5	349 aa	Predicted RBP	7.91	□□□□□ -1.14
CASC19-238	ENST00000641523	PRKRIP1	Q9H875	184 aa	Predicted RBP	7.91	□□□□□ -1.14
CASC19-238	ENST00000641523	SUGCT	Q9HAC7	445 aa		7.91	□□□□□ -1.14
CASC19-238	ENST00000641523	ANKRD31	Q8N7Z5	1873 aa		7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	CHL1	O00533	1208 aa		7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	RNGTT	O60942	597 aa	Known RBP	7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	YARS	P54577	528 aa	Known RBP	7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	HLF	Q16534	295 aa		7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	CRY2	Q49AN0	593 aa		7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	LCE2A	Q5TA79	106 aa	Predicted RBP	7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	KIAA1211L	Q6NV74	962 aa		7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	SHISA2	Q6UWI4	295 aa		7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	CDC37L1	Q7L3B6	337 aa		7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	MRPL41	Q8IXM3	137 aa	Known RBP	7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	EXOC8	Q8IYI6	725 aa		7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	PHACTR4	Q8IZ21	702 aa		7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	RPGR	Q92834	1020 aa	Known RBP	7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	MRPL18	Q9H0U6	180 aa	Known RBP	7.9	□□□□□ -1.14
CASC19-238	ENST00000641523	COL11A2	P13942	1736 aa	Predicted RBP	7.9	□□□□□ -1.15
CASC19-238	ENST00000641523	SBF1	O95248	1867 aa		7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	IQCA1L	A6NCM1	817 aa		7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	ENPP3	O14638	875 aa		7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	GNB5	O14775	395 aa		7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	ALX3	O95076	343 aa		7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	ELN	P15502	786 aa		7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	EIF2S2	P20042	333 aa	Known RBP	7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	ASPA	P45381	313 aa		7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	SLBP	Q14493	270 aa	Known RBP eCLIP	7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	TTLL7	Q6ZT98	887 aa		7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	SLFN12	Q8IYM2	578 aa		7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	ISL2	Q96A47	359 aa		7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	PHAX	Q9H814	394 aa	Known RBP	7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	DDX21	Q9NR30	783 aa	Known RBP eCLIP	7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	FANCL	Q9NW38	375 aa		7.89	□□□□□ -1.15
CASC19-238	ENST00000641523	ESYT3	A0FGR9	886 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	SPDYE3	A6NKU9	549 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	TIAF1	O95411	115 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	HOXA10	P31260	410 aa	Predicted RBP	7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	NCAPH	Q15003	741 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	GRIK4	Q16099	956 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	GNPTAB	Q3T906	1256 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	FDX2	Q6P4F2	183 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	TREML4	Q6UXN2	200 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	TMEM192	Q8IY95	271 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	CCDC146	Q8IYE0	955 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	ZNF34	Q8IZ26	560 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	KLHL6	Q8WZ60	621 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	RBM17	Q96I25	401 aa	Known RBP	7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	UTP14A	Q9BVJ6	771 aa	Known RBP	7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	PIDD1	Q9HB75	910 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	SSU72	Q9NP77	194 aa	Known RBP	7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	FAM105A	Q9NUU6	356 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	FAM86C1	Q9NVL1	165 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	ZMYM5	Q9UJ78	669 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	MKL2	Q9ULH7	1088 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	ADAMTS8	Q9UP79	889 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	LEMD3	Q9Y2U8	911 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	ACTL7B	Q9Y614	415 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	ARFGEF2	Q9Y6D5	1785 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	FER1L6	Q2WGJ9	1857 aa		7.88	□□□□□ -1.15
CASC19-238	ENST00000641523	RGS13	O14921	159 aa		7.88	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms