RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 VCPP55072 806 aaKnown RBP9.3□□□□□ -0.92
PHGDH-217ENST00000641455 HTRA4P83105 476 aaPredicted RBP9.3□□□□□ -0.92
PHGDH-217ENST00000641455 DLX2Q07687 328 aaPredicted RBP9.3□□□□□ -0.92
PHGDH-217ENST00000641455 MKRN4PQ13434 485 aaPredicted RBP9.3□□□□□ -0.92
PHGDH-217ENST00000641455 CCDC96Q2M329 555 aa9.3□□□□□ -0.92
PHGDH-217ENST00000641455 ZNF618Q5T7W0 954 aa9.3□□□□□ -0.92
PHGDH-217ENST00000641455 CEP85Q6P2H3 762 aa9.3□□□□□ -0.92
PHGDH-217ENST00000641455 SLC30A10Q6XR72 485 aa9.3□□□□□ -0.92
PHGDH-217ENST00000641455 CHST3Q7LGC8 479 aa9.3□□□□□ -0.92
PHGDH-217ENST00000641455 SP7Q8TDD2 431 aaPredicted RBP9.3□□□□□ -0.92
PHGDH-217ENST00000641455 AFG1LQ8WV93 481 aa9.3□□□□□ -0.92
PHGDH-217ENST00000641455 GMCL1Q96IK5 515 aa9.3□□□□□ -0.92
PHGDH-217ENST00000641455 CTAGE1Q96RT6 745 aa9.3□□□□□ -0.92
PHGDH-217ENST00000641455 HDAC6Q9UBN7 1215 aa9.3□□□□□ -0.92
PHGDH-217ENST00000641455 SPTBN4Q9H254 2564 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 CACNA1HO95180 2353 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 LOC102724159A0A0B4J2E5 919 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 H0Y858 1186 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 NFIBO00712 420 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 TBX10O75333 385 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 APPP05067 770 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 ICAM1P05362 532 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 MMP3P08254 477 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 CASTP20810 708 aaKnown RBP9.29□□□□□ -0.92
PHGDH-217ENST00000641455 NDUFV1P49821 464 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 ZXDAP98168 799 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 RBL2Q08999 1139 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 HYAL1Q12794 435 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 PTK7Q13308 1070 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 COL19A1Q14993 1142 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 PWP2Q15269 919 aaKnown RBP9.29□□□□□ -0.92
PHGDH-217ENST00000641455 RCSD1Q6JBY9 416 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 RNF207Q6ZRF8 634 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 RASGRP2Q7LDG7 609 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 ERMP1Q7Z2K6 904 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 SESTD1Q86VW0 696 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 DHX37Q8IY37 1157 aaKnown RBP9.29□□□□□ -0.92
PHGDH-217ENST00000641455 DBF4BQ8NFT6 615 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 KIF1BPQ96EK5 621 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 TLR9Q9NR96 1032 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 GTF2IRD1Q9UHL9 959 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 STX8Q9UNK0 236 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 EMSYQ7Z589 1322 aa9.29□□□□□ -0.92
PHGDH-217ENST00000641455 CFAP54Q96N23 3096 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 RALGAPA2Q2PPJ7 1873 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 GSG1L2A8MUP6 293 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 B4DLN1 442 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 ARIH2O95376 493 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 GH1P01241 217 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 ID4P47928 161 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 PSEN2P49810 448 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 MRPL12P52815 198 aaKnown RBP9.28□□□□□ -0.92
PHGDH-217ENST00000641455 TFAP4Q01664 338 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 MBTPS1Q14703 1052 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 ASCL5Q7RTU5 278 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 NEDD1Q8NHV4 660 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 STRBPQ96SI9 672 aaKnown RBP9.28□□□□□ -0.92
PHGDH-217ENST00000641455 HAUS7Q99871 368 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 KATNAL1Q9BW62 490 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 IFIH1Q9BYX4 1025 aaKnown RBP9.28□□□□□ -0.92
PHGDH-217ENST00000641455 PLXNA3P51805 1871 aa9.28□□□□□ -0.92
PHGDH-217ENST00000641455 ATG2AQ2TAZ0 1938 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 PLIN4Q96Q06 1357 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 RSPH10B2B2RC85 870 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 GRM6O15303 877 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 LINC01565O15544 149 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 PLA2G6O60733 806 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 SLC3A2P08195 630 aaKnown RBP9.27□□□□□ -0.93
PHGDH-217ENST00000641455 RSPH10BP0C881 870 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 ZNF286BP0CG31 522 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 ATP5JP18859 108 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 AVPR2P30518 371 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 GTF2F1P35269 517 aaKnown RBP eCLIP9.27□□□□□ -0.93
PHGDH-217ENST00000641455 SLC16A2P36021 539 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 THPOP40225 353 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 ZNF200P98182 395 aaPredicted RBP9.27□□□□□ -0.93
PHGDH-217ENST00000641455 SIGLEC14Q08ET2 396 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 MFSD10Q14728 455 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 DGKDQ16760 1214 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 CTC1Q2NKJ3 1217 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 PPP4R3BQ5MIZ7 849 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 GIMAP6Q6P9H5 292 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 TRAF7Q6Q0C0 670 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 SEPT14Q6ZU15 432 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 ZBTB33Q86T24 672 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 FIBCD1Q8N539 461 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 SEPT8Q92599 483 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 KAT2BQ92831 832 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 WNT8BQ93098 351 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 FSD1Q9BTV5 496 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 C11orf84Q9BUA3 381 aaPredicted RBP9.27□□□□□ -0.93
PHGDH-217ENST00000641455 LMAN2LQ9H0V9 348 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 RANBP17Q9H2T7 1088 aaKnown RBP9.27□□□□□ -0.93
PHGDH-217ENST00000641455 EPB41L4AQ9HCS5 686 aaPredicted RBP9.27□□□□□ -0.93
PHGDH-217ENST00000641455 INCENPQ9NQS7 918 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 TRPC6Q9Y210 931 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 FAM186AA6NE01 2351 aa9.27□□□□□ -0.93
PHGDH-217ENST00000641455 COL4A6Q14031 1691 aa9.26□□□□□ -0.93
PHGDH-217ENST00000641455 USP34Q70CQ2 3546 aa9.26□□□□□ -0.93
PHGDH-217ENST00000641455 PRR23AA6NEV1 266 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms