RNA–Protein interactions for RNA: ENST00000640736.1

RTTN-221, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,132 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-221ENST00000640736 FAM47CQ5HY64 1035 aa15.98■□□□□ 0.15
RTTN-221ENST00000640736 C16orf59Q7L2K0 433 aa15.98■□□□□ 0.15
RTTN-221ENST00000640736 FCHSD1Q86WN1 690 aa15.98■□□□□ 0.15
RTTN-221ENST00000640736 CTCFLQ8NI51 663 aaPredicted RBP15.98■□□□□ 0.15
RTTN-221ENST00000640736 AFG1LQ8WV93 481 aa15.98■□□□□ 0.15
RTTN-221ENST00000640736 COL6A3P12111 3177 aa15.98■□□□□ 0.15
RTTN-221ENST00000640736 CCDC69A6NI79 296 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 GCOM1H8Y6P7 765 aaPredicted RBP15.97■□□□□ 0.15
RTTN-221ENST00000640736 KPNA6O60684 536 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 EIF3JO75822 258 aaKnown RBP15.97■□□□□ 0.15
RTTN-221ENST00000640736 MMP3P08254 477 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 POLR2MP0CAP2 368 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 RXRAP19793 462 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 KIF5BP33176 963 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 CCL23P55773 120 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 ARHGAP1Q07960 439 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 TMEM240Q5SV17 173 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 TMEM87BQ96K49 555 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 PDCD2LQ9BRP1 358 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 MTA3Q9BTC8 594 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 NOC4LQ9BVI4 516 aaKnown RBP15.97■□□□□ 0.15
RTTN-221ENST00000640736 LRRC2Q9BYS8 371 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 IL23AQ9NPF7 189 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 MAP3K20Q9NYL2 800 aaKnown RBP15.97■□□□□ 0.15
RTTN-221ENST00000640736 STXBP5LQ9Y2K9 1186 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 MRVI1Q9Y6F6 885 aa15.97■□□□□ 0.15
RTTN-221ENST00000640736 SCN5AQ14524 2016 aa15.96■□□□□ 0.15
RTTN-221ENST00000640736 CYP2C9P11712 490 aa15.96■□□□□ 0.15
RTTN-221ENST00000640736 PGM5Q15124 567 aa15.96■□□□□ 0.15
RTTN-221ENST00000640736 PSRC1Q6PGN9 363 aaPredicted RBP15.96■□□□□ 0.15
RTTN-221ENST00000640736 ZNF365Q70YC5 407 aa15.96■□□□□ 0.15
RTTN-221ENST00000640736 RAB11FIP4Q86YS3 637 aa15.96■□□□□ 0.15
RTTN-221ENST00000640736 TMTC2Q8N394 836 aa15.96■□□□□ 0.15
RTTN-221ENST00000640736 SAMD3Q8N6K7 520 aa15.96■□□□□ 0.15
RTTN-221ENST00000640736 IL31RAQ8NI17 732 aa15.96■□□□□ 0.15
RTTN-221ENST00000640736 RRP36Q96EU6 259 aaKnown RBP15.96■□□□□ 0.15
RTTN-221ENST00000640736 ZFP91Q96JP5 570 aaPredicted RBP15.96■□□□□ 0.15
RTTN-221ENST00000640736 GUCD1Q96NT3 240 aa15.96■□□□□ 0.15
RTTN-221ENST00000640736 MAP3K14Q99558 947 aa15.96■□□□□ 0.15
RTTN-221ENST00000640736 SPZ1Q9BXG8 430 aa15.96■□□□□ 0.15
RTTN-221ENST00000640736 WNT8AQ9H1J5 351 aa15.96■□□□□ 0.15
RTTN-221ENST00000640736 DDX41Q9UJV9 622 aaKnown RBP15.96■□□□□ 0.15
RTTN-221ENST00000640736 GBF1Q92538 1859 aa15.95■□□□□ 0.14
RTTN-221ENST00000640736 TRIP12Q14669 1992 aaPredicted RBP15.95■□□□□ 0.14
RTTN-221ENST00000640736 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.95■□□□□ 0.14
RTTN-221ENST00000640736 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.95■□□□□ 0.14
RTTN-221ENST00000640736 SORBS3O60504 671 aa15.95■□□□□ 0.14
RTTN-221ENST00000640736 CDC45O75419 566 aa15.95■□□□□ 0.14
RTTN-221ENST00000640736 PLEKHA8P1O95397 391 aa15.95■□□□□ 0.14
RTTN-221ENST00000640736 SUPT20HL2P0C7V6 817 aa15.95■□□□□ 0.14
RTTN-221ENST00000640736 RNF20Q5VTR2 975 aa15.95■□□□□ 0.14
RTTN-221ENST00000640736 NFRKBQ6P4R8 1299 aa15.95■□□□□ 0.14
RTTN-221ENST00000640736 CMTR1Q8N1G2 835 aaKnown RBP15.95■□□□□ 0.14
RTTN-221ENST00000640736 SCLYQ96I15 445 aa15.95■□□□□ 0.14
RTTN-221ENST00000640736 CCDC136Q96JN2 1154 aa15.95■□□□□ 0.14
RTTN-221ENST00000640736 SEMA6BQ9H3T3 888 aa15.95■□□□□ 0.14
RTTN-221ENST00000640736 SEC63Q9UGP8 760 aaKnown RBP15.95■□□□□ 0.14
RTTN-221ENST00000640736 DOCK5Q9H7D0 1870 aa15.95■□□□□ 0.14
RTTN-221ENST00000640736 GRXCR1A8MXD5 290 aa15.94■□□□□ 0.14
RTTN-221ENST00000640736 RGS20O76081 388 aa15.94■□□□□ 0.14
RTTN-221ENST00000640736 CCND2P30279 289 aa15.94■□□□□ 0.14
RTTN-221ENST00000640736 GNAQP50148 359 aa15.94■□□□□ 0.14
RTTN-221ENST00000640736 VSIG10LQ86VR7 867 aa15.94■□□□□ 0.14
RTTN-221ENST00000640736 DHX37Q8IY37 1157 aaKnown RBP15.94■□□□□ 0.14
RTTN-221ENST00000640736 SRBD1Q8N5C6 995 aaKnown RBP15.94■□□□□ 0.14
RTTN-221ENST00000640736 SLC17A8Q8NDX2 589 aa15.94■□□□□ 0.14
RTTN-221ENST00000640736 LZTS2Q9BRK4 669 aa15.94■□□□□ 0.14
RTTN-221ENST00000640736 TTYH1Q9H313 450 aaPredicted RBP15.94■□□□□ 0.14
RTTN-221ENST00000640736 SLC12A7Q9Y666 1083 aa15.94■□□□□ 0.14
RTTN-221ENST00000640736 TANC1Q9C0D5 1861 aa15.93■□□□□ 0.14
RTTN-221ENST00000640736 FGBP02675 491 aa15.93■□□□□ 0.14
RTTN-221ENST00000640736 CALM1P0DP23 149 aa15.93■□□□□ 0.14
RTTN-221ENST00000640736 CALM2P0DP24 149 aa15.93■□□□□ 0.14
RTTN-221ENST00000640736 CALM3P0DP25 149 aa15.93■□□□□ 0.14
RTTN-221ENST00000640736 CASTP20810 708 aaKnown RBP15.93■□□□□ 0.14
RTTN-221ENST00000640736 LIFRP42702 1097 aa15.93■□□□□ 0.14
RTTN-221ENST00000640736 LAMC2Q13753 1193 aa15.93■□□□□ 0.14
RTTN-221ENST00000640736 DGKDQ16760 1214 aa15.93■□□□□ 0.14
RTTN-221ENST00000640736 TCEANC2Q96MN5 208 aa15.93■□□□□ 0.14
RTTN-221ENST00000640736 CDX2Q99626 313 aaPredicted RBP15.93■□□□□ 0.14
RTTN-221ENST00000640736 NOD1Q9Y239 953 aa15.93■□□□□ 0.14
RTTN-221ENST00000640736 C19orf67A6NJJ6 358 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 ZNF286BP0CG31 522 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 DNAJB2P25686 324 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 SMARCA1P28370 1054 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 PTPN11Q06124 597 aaPredicted RBP15.92■□□□□ 0.14
RTTN-221ENST00000640736 RASIP1Q5U651 963 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 KCNV1Q6PIU1 500 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 USP17L6PQ6QN14 398 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 OTOP2Q7RTS6 562 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 MICU3Q86XE3 530 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 CCDC82Q8N4S0 544 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 SMARCC2Q8TAQ2 1214 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 HERVK_113Q902F9 699 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 KAT2BQ92831 832 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 GPKOWQ92917 476 aaPredicted RBP eCLIP15.92■□□□□ 0.14
RTTN-221ENST00000640736 CUL5Q93034 780 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 EMID1Q96A84 441 aaPredicted RBP15.92■□□□□ 0.14
RTTN-221ENST00000640736 NEK1Q96PY6 1258 aa15.92■□□□□ 0.14
RTTN-221ENST00000640736 ALG1Q9BT22 464 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms