RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 KPNA6O60684 536 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 CDC45O75419 566 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 POLR2MP0CAP2 368 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 ACRP10323 421 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 RXRAP19793 462 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 SMAD3P84022 425 aaKnown RBP16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 ARHGAP1Q07960 439 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 NBPF20Q3BBV1 942 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 FAM47CQ5HY64 1035 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 RNF20Q5VTR2 975 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 FAM109BQ6ICB4 259 aaPredicted RBP16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 FCHSD1Q86WN1 690 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 RAB11FIP4Q86YS3 637 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 SAMD3Q8N6K7 520 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 IL31RAQ8NI17 732 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 CCDC136Q96JN2 1154 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 PDCD2LQ9BRP1 358 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 NOC4LQ9BVI4 516 aaKnown RBP16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 SPZ1Q9BXG8 430 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 MRVI1Q9Y6F6 885 aa16.67■□□□□ 0.26
HNRNPU-229ENST00000640440 PLEKHA8P1O95397 391 aa16.66■□□□□ 0.26
HNRNPU-229ENST00000640440 MMP3P08254 477 aa16.66■□□□□ 0.26
HNRNPU-229ENST00000640440 CCL23P55773 120 aa16.66■□□□□ 0.26
HNRNPU-229ENST00000640440 CHMP4BP1P59074 171 aa16.66■□□□□ 0.26
HNRNPU-229ENST00000640440 PGM5Q15124 567 aa16.66■□□□□ 0.26
HNRNPU-229ENST00000640440 TMEM240Q5SV17 173 aa16.66■□□□□ 0.26
HNRNPU-229ENST00000640440 C16orf59Q7L2K0 433 aa16.66■□□□□ 0.26
HNRNPU-229ENST00000640440 TMTC2Q8N394 836 aa16.66■□□□□ 0.26
HNRNPU-229ENST00000640440 RRP36Q96EU6 259 aaKnown RBP16.66■□□□□ 0.26
HNRNPU-229ENST00000640440 DDX41Q9UJV9 622 aaKnown RBP16.66■□□□□ 0.26
HNRNPU-229ENST00000640440 CYP2C9P11712 490 aa16.65■□□□□ 0.26
HNRNPU-229ENST00000640440 LIFRP42702 1097 aa16.65■□□□□ 0.26
HNRNPU-229ENST00000640440 NFRKBQ6P4R8 1299 aa16.65■□□□□ 0.26
HNRNPU-229ENST00000640440 PSRC1Q6PGN9 363 aaPredicted RBP16.65■□□□□ 0.26
HNRNPU-229ENST00000640440 ZNF365Q70YC5 407 aa16.65■□□□□ 0.26
HNRNPU-229ENST00000640440 CMTR1Q8N1G2 835 aaKnown RBP16.65■□□□□ 0.26
HNRNPU-229ENST00000640440 ZFP91Q96JP5 570 aaPredicted RBP16.65■□□□□ 0.26
HNRNPU-229ENST00000640440 GUCD1Q96NT3 240 aa16.65■□□□□ 0.26
HNRNPU-229ENST00000640440 LZTS2Q9BRK4 669 aa16.65■□□□□ 0.26
HNRNPU-229ENST00000640440 WNT8AQ9H1J5 351 aa16.65■□□□□ 0.26
HNRNPU-229ENST00000640440 IL23AQ9NPF7 189 aa16.65■□□□□ 0.26
HNRNPU-229ENST00000640440 SEC63Q9UGP8 760 aaKnown RBP16.65■□□□□ 0.26
HNRNPU-229ENST00000640440 STXBP5LQ9Y2K9 1186 aa16.65■□□□□ 0.26
HNRNPU-229ENST00000640440 SLC12A7Q9Y666 1083 aa16.65■□□□□ 0.26
HNRNPU-229ENST00000640440 RGS20O76081 388 aa16.64■□□□□ 0.25
HNRNPU-229ENST00000640440 SUPT20HL2P0C7V6 817 aa16.64■□□□□ 0.25
HNRNPU-229ENST00000640440 CALM1P0DP23 149 aa16.64■□□□□ 0.25
HNRNPU-229ENST00000640440 CALM2P0DP24 149 aa16.64■□□□□ 0.25
HNRNPU-229ENST00000640440 CALM3P0DP25 149 aa16.64■□□□□ 0.25
HNRNPU-229ENST00000640440 SMARCA1P28370 1054 aa16.64■□□□□ 0.25
HNRNPU-229ENST00000640440 CCND2P30279 289 aa16.64■□□□□ 0.25
HNRNPU-229ENST00000640440 GNAQP50148 359 aa16.64■□□□□ 0.25
HNRNPU-229ENST00000640440 VSIG10LQ86VR7 867 aa16.64■□□□□ 0.25
HNRNPU-229ENST00000640440 MICU3Q86XE3 530 aa16.64■□□□□ 0.25
HNRNPU-229ENST00000640440 SRBD1Q8N5C6 995 aaKnown RBP16.64■□□□□ 0.25
HNRNPU-229ENST00000640440 EMID1Q96A84 441 aaPredicted RBP16.64■□□□□ 0.25
HNRNPU-229ENST00000640440 SORBS3O60504 671 aa16.63■□□□□ 0.25
HNRNPU-229ENST00000640440 CENPBP07199 599 aaPredicted RBP16.63■□□□□ 0.25
HNRNPU-229ENST00000640440 DGKDQ16760 1214 aa16.63■□□□□ 0.25
HNRNPU-229ENST00000640440 RASEFQ8IZ41 740 aa16.63■□□□□ 0.25
HNRNPU-229ENST00000640440 SCLYQ96I15 445 aa16.63■□□□□ 0.25
HNRNPU-229ENST00000640440 TCEANC2Q96MN5 208 aa16.63■□□□□ 0.25
HNRNPU-229ENST00000640440 NEK1Q96PY6 1258 aa16.63■□□□□ 0.25
HNRNPU-229ENST00000640440 A0A0C4DFX4 3053 aa16.63■□□□□ 0.25
HNRNPU-229ENST00000640440 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 ZNF286BP0CG31 522 aa16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 CASTP20810 708 aaKnown RBP16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 UBA1P22314 1058 aaKnown RBP16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 PTPN11Q06124 597 aaPredicted RBP16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 LAMC2Q13753 1193 aa16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 ADCK5Q3MIX3 580 aa16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 RASIP1Q5U651 963 aa16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 TMTC3Q6ZXV5 915 aa16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 SGMS1Q86VZ5 419 aa16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 DHX37Q8IY37 1157 aaKnown RBP16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 CCDC82Q8N4S0 544 aa16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 PPTC7Q8NI37 304 aa16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 SMARCC2Q8TAQ2 1214 aa16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 KAT2BQ92831 832 aa16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 GPKOWQ92917 476 aaPredicted RBP eCLIP16.62■□□□□ 0.254e-6■□□□□ 8.7
HNRNPU-229ENST00000640440 TTYH1Q9H313 450 aaPredicted RBP16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 SEMA6BQ9H3T3 888 aa16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 NOD1Q9Y239 953 aa16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 FRMPD4Q14CM0 1322 aa16.62■□□□□ 0.25
HNRNPU-229ENST00000640440 hCG_1642624A0A1W2PR95 340 aa16.61■□□□□ 0.25
HNRNPU-229ENST00000640440 GGPS1O95749 300 aa16.61■□□□□ 0.25
HNRNPU-229ENST00000640440 KCNV1Q6PIU1 500 aa16.61■□□□□ 0.25
HNRNPU-229ENST00000640440 USP17L6PQ6QN14 398 aa16.61■□□□□ 0.25
HNRNPU-229ENST00000640440 FANCBQ8NB91 859 aa16.61■□□□□ 0.25
HNRNPU-229ENST00000640440 HERVK_113Q902F9 699 aa16.61■□□□□ 0.25
HNRNPU-229ENST00000640440 CUL5Q93034 780 aa16.61■□□□□ 0.25
HNRNPU-229ENST00000640440 CXXC1Q9P0U4 656 aaPredicted RBP16.61■□□□□ 0.25
HNRNPU-229ENST00000640440 EYSQ5T1H1 3165 aa16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 GRXCR1A8MXD5 290 aa16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 FGBP02675 491 aa16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 DNAJB2P25686 324 aa16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 SP2Q02086 613 aa16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 TSGA10IPQ3SY00 556 aa16.6■□□□□ 0.25
HNRNPU-229ENST00000640440 CELF3Q5SZQ8 465 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms