RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 SLC35F1Q5T1Q4 408 aa4.87□□□□□ -1.63
ATM-230ENST00000640388 ACBD5Q5T8D3 534 aaPredicted RBP4.87□□□□□ -1.63
ATM-230ENST00000640388 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
ATM-230ENST00000640388 YOD1Q5VVQ6 348 aaPredicted RBP4.87□□□□□ -1.63
ATM-230ENST00000640388 ZC3H14Q6PJT7 736 aaKnown RBP4.87□□□□□ -1.63
ATM-230ENST00000640388 NSMFQ6X4W1 530 aa4.87□□□□□ -1.63
ATM-230ENST00000640388 TEX2Q8IWB9 1127 aa4.87□□□□□ -1.63
ATM-230ENST00000640388 RCBTB1Q8NDN9 531 aa4.87□□□□□ -1.63
ATM-230ENST00000640388 ZNF669Q96BR6 464 aaPredicted RBP4.87□□□□□ -1.63
ATM-230ENST00000640388 C1orf159Q96HA4 380 aa4.87□□□□□ -1.63
ATM-230ENST00000640388 CHAMP1Q96JM3 812 aa4.87□□□□□ -1.63
ATM-230ENST00000640388 DEPDC7Q96QD5 511 aa4.87□□□□□ -1.63
ATM-230ENST00000640388 SRPK1Q96SB4 655 aaKnown RBP4.87□□□□□ -1.63
ATM-230ENST00000640388 SNTG2Q9NY99 539 aa4.87□□□□□ -1.63
ATM-230ENST00000640388 PCDHA2Q9Y5H9 948 aa4.87□□□□□ -1.63
ATM-230ENST00000640388 HCFC2Q9Y5Z7 792 aa4.87□□□□□ -1.63
ATM-230ENST00000640388 C22orf46C9J442 243 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 MYO1BO43795 1136 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 DIAPH1O60610 1272 aaKnown RBP4.86□□□□□ -1.63
ATM-230ENST00000640388 NTRK1P04629 796 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 FGFR1P11362 822 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 BCL6P41182 706 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 PRR5P85299 388 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 MAP4K2Q12851 820 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 RASA3Q14644 834 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 PLEKHN1Q494U1 663 aaPredicted RBP4.86□□□□□ -1.63
ATM-230ENST00000640388 TTLL10Q6ZVT0 673 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 USP53Q70EK8 1073 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 CEP68Q76N32 757 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 PLEKHO2Q8TD55 490 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 OSBP2Q969R2 916 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 CNTD2Q9H8S5 307 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 GCM1Q9NP62 436 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 CD320Q9NPF0 282 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 SMG5Q9UPR3 1016 aaKnown RBP4.86□□□□□ -1.63
ATM-230ENST00000640388 KDM2BQ8NHM5 1336 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 LTBP4Q8N2S1 1624 aa4.86□□□□□ -1.63
ATM-230ENST00000640388 BLACEA4D250 179 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 ADCY3O60266 1144 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 ZSCAN22P10073 491 aaPredicted RBP4.85□□□□□ -1.63
ATM-230ENST00000640388 FPR2P25090 351 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 CDR1P51861 262 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 EPHB3P54753 998 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 NCKAP1LP55160 1127 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 ZNF200P98182 395 aaPredicted RBP4.85□□□□□ -1.63
ATM-230ENST00000640388 TESK1Q15569 626 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 WWC2Q6AWC2 1192 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 LRP10Q7Z4F1 713 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 LDHDQ86WU2 507 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 MKL1Q969V6 931 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 TRMT2BQ96GJ1 504 aaKnown RBP4.85□□□□□ -1.63
ATM-230ENST00000640388 TMEM169Q96HH4 297 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 DNAJC7Q99615 494 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 CDC6Q99741 560 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 FBXL7Q9UJT9 491 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 NUDT5Q9UKK9 219 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 SIT1Q9Y3P8 196 aa4.85□□□□□ -1.63
ATM-230ENST00000640388 PPRC1Q5VV67 1664 aaKnown RBP4.85□□□□□ -1.63
ATM-230ENST00000640388 SYNJ1O43426 1573 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 NCANO14594 1321 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 NPIPB6E9PJ23 425 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 N4BP3O15049 544 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 FAM153BP0C7A2 387 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 GTF2A2P52657 109 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 RBM10P98175 930 aaKnown RBP4.84□□□□□ -1.63
ATM-230ENST00000640388 LSAMPQ13449 338 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 KCNA10Q16322 511 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 LILRA6Q6PI73 481 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 ZBTB38Q8NAP3 1195 aaPredicted RBP4.84□□□□□ -1.63
ATM-230ENST00000640388 NETO2Q8NC67 525 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 MZB1Q8WU39 189 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 UBXN4Q92575 508 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 PEX11GQ96HA9 241 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 IPO9Q96P70 1041 aaKnown RBP4.84□□□□□ -1.63
ATM-230ENST00000640388 PHF20Q9BVI0 1012 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 OSBPL2Q9H1P3 480 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 BCAS3Q9H6U6 928 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 PLA2G2DQ9UNK4 145 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 NPFFR2Q9Y5X5 522 aa4.84□□□□□ -1.63
ATM-230ENST00000640388 PTPRMP28827 1452 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 IFT140Q96RY7 1462 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 CADPSQ9ULU8 1353 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 TRBV23-1A0A0A0MS06 115 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 MSCO60682 206 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 BMS1Q14692 1282 aaKnown RBP4.83□□□□□ -1.64
ATM-230ENST00000640388 NTRK3Q16288 839 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 FAM209AQ5JX71 171 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 FOXB2Q5VYV0 432 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 KCNT2Q6UVM3 1135 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 NLRP10Q86W26 655 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 SCUBE1Q8IWY4 988 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 DCAF4Q8WV16 495 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 ALG3Q92685 438 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 SIGLEC10Q96LC7 697 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 GPR27Q9NS67 375 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 CLDND1Q9NY35 253 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 CNOT6Q9ULM6 557 aaKnown RBP4.83□□□□□ -1.64
ATM-230ENST00000640388 PCDHA5Q9Y5H7 936 aa4.83□□□□□ -1.64
ATM-230ENST00000640388 IRAK3Q9Y616 596 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms