RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 TSC22D3Q99576 134 aa9.99□□□□□ -0.81
PAX6-259ENST00000639916 POLD4Q9HCU8 107 aa9.99□□□□□ -0.81
PAX6-259ENST00000639916 ARPP21Q9UBL0 812 aaPredicted RBP9.99□□□□□ -0.81
PAX6-259ENST00000639916 GGA1Q9UJY5 639 aa9.99□□□□□ -0.81
PAX6-259ENST00000639916 KCNJ14Q9UNX9 436 aa9.99□□□□□ -0.81
PAX6-259ENST00000639916 TARSL2A2RTX5 802 aaKnown RBP9.98□□□□□ -0.81
PAX6-259ENST00000639916 A6NHS1 94 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 B4DLN1 442 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 LIN7AO14910 233 aaPredicted RBP9.98□□□□□ -0.81
PAX6-259ENST00000639916 ANP32DO95626 131 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 ATP2B4P23634 1241 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 MARCKSP29966 332 aaPredicted RBP9.98□□□□□ -0.81
PAX6-259ENST00000639916 SEC24CP53992 1094 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 PPP2R5BQ15173 497 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 SAFBQ15424 915 aaKnown RBP eCLIP9.98□□□□□ -0.81
PAX6-259ENST00000639916 ANKRD20A8PQ5CZ79 823 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 FAM47AQ5JRC9 791 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 RAD9BQ6WBX8 426 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 TSHZ1Q6ZSZ6 1077 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 YIPF2Q9BWQ6 316 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 CD209Q9NNX6 404 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.98□□□□□ -0.81
PAX6-259ENST00000639916 CCDC88AQ3V6T2 1871 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 BRWD3Q6RI45 1802 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 DUOX1Q9NRD9 1551 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 BTBD18B2RXH4 712 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 ORC4O43929 436 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 NMT2O60551 498 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 MMP1P03956 469 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 USP17L8P0C7I0 530 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 EPB41P11171 864 aaKnown RBP9.98□□□□□ -0.81
PAX6-259ENST00000639916 ALDH1B1P30837 517 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 HOXA10P31260 410 aaPredicted RBP9.98□□□□□ -0.81
PAX6-259ENST00000639916 GSTO1P78417 241 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 GUCY1A3Q02108 690 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 PDE4BQ07343 736 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 BLMHQ13867 455 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 PTGISQ16647 500 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 SBK1Q52WX2 424 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 CCDC178Q5BJE1 867 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 SPECC1Q5M775 1068 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 SPECC1LQ69YQ0 1117 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 CC2D2BQ6DHV5 1058 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 CCNI2Q6ZMN8 369 aaPredicted RBP9.98□□□□□ -0.81
PAX6-259ENST00000639916 NLRP14Q86W24 1093 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 SH3RF3Q8TEJ3 882 aaPredicted RBP9.98□□□□□ -0.81
PAX6-259ENST00000639916 GORASP1Q9BQQ3 440 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 MYO1AQ9UBC5 1043 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 BAIAP2L1Q9UHR4 511 aa9.98□□□□□ -0.81
PAX6-259ENST00000639916 OPA1O60313 960 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 BAG3O95817 575 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 SCTRP47872 440 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 SCNN1BP51168 640 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 ELF3P78545 371 aaPredicted RBP9.97□□□□□ -0.81
PAX6-259ENST00000639916 TROAPQ12815 778 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 SLMAPQ14BN4 828 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 NOSTRINQ8IVI9 506 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 TRIM42Q8IWZ5 723 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 DIS3L2Q8IYB7 885 aaKnown RBP9.97□□□□□ -0.81
PAX6-259ENST00000639916 GALNT15Q8N3T1 639 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 SH2D3CQ8N5H7 860 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 RNPC3Q96LT9 517 aaKnown RBP9.97□□□□□ -0.81
PAX6-259ENST00000639916 MMADHCQ9H3L0 296 aaPredicted RBP9.97□□□□□ -0.81
PAX6-259ENST00000639916 POLLQ9UGP5 575 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 PPP1R37O75864 691 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 FAM107AO95990 144 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 ABL1P00519 1130 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 ATP4AP20648 1035 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 MAGEA10P43363 369 aaPredicted RBP9.97□□□□□ -0.81
PAX6-259ENST00000639916 POTEHQ6S545 545 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 CRELD2Q6UXH1 353 aaPredicted RBP9.97□□□□□ -0.81
PAX6-259ENST00000639916 RINLQ6ZS11 566 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 AENQ8WTP8 325 aaKnown RBP9.97□□□□□ -0.81
PAX6-259ENST00000639916 RRP36Q96EU6 259 aaKnown RBP9.97□□□□□ -0.81
PAX6-259ENST00000639916 CRAMP1Q96RY5 1269 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 MAP3K14Q99558 947 aa9.97□□□□□ -0.81
PAX6-259ENST00000639916 RNF26Q9BY78 433 aaPredicted RBP9.97□□□□□ -0.81
PAX6-259ENST00000639916 TSPY2A6NKD2 308 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 C6orf229H3BNL8 230 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 UPP2O95045 317 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 LDHCP07864 332 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 CALM1P0DP23 149 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 CALM2P0DP24 149 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 CALM3P0DP25 149 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 MYBL1P10243 752 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 IL1R1P14778 569 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 CMA1P23946 247 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 PTPAQ15257 358 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 LRRC23Q53EV4 343 aaPredicted RBP9.96□□□□□ -0.81
PAX6-259ENST00000639916 TBC1D16Q8TBP0 767 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 TGFBRAP1Q8WUH2 860 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 ZFAND2BQ8WV99 257 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 TSPAN18Q96SJ8 248 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 L3MBTL1Q9Y468 752 aa9.96□□□□□ -0.81
PAX6-259ENST00000639916 ECM29Q5VYK3 1845 aa9.96□□□□□ -0.82
PAX6-259ENST00000639916 hCG_1642624A0A1W2PR95 340 aa9.96□□□□□ -0.82
PAX6-259ENST00000639916 KLRG2A4D1S0 409 aaPredicted RBP9.96□□□□□ -0.82
PAX6-259ENST00000639916 PPP6R2O75170 966 aa9.96□□□□□ -0.82
PAX6-259ENST00000639916 SMIM24O75264 130 aa9.96□□□□□ -0.82
PAX6-259ENST00000639916 PLEKHA8P1O95397 391 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms