RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 BMP8BP34820 402 aa20.58■□□□□ 0.89
SPIN3-220ENST00000639257 MRPS9P82933 396 aaKnown RBP20.58■□□□□ 0.89
SPIN3-220ENST00000639257 ARHGAP1Q07960 439 aa20.58■□□□□ 0.89
SPIN3-220ENST00000639257 C8orf34Q49A92 452 aa20.58■□□□□ 0.89
SPIN3-220ENST00000639257 FCHSD1Q86WN1 690 aa20.58■□□□□ 0.89
SPIN3-220ENST00000639257 COPS5Q92905 334 aa20.58■□□□□ 0.89
SPIN3-220ENST00000639257 GPKOWQ92917 476 aaPredicted RBP eCLIP20.58■□□□□ 0.89
SPIN3-220ENST00000639257 INPP4AQ96PE3 977 aaPredicted RBP20.58■□□□□ 0.89
SPIN3-220ENST00000639257 PSTPIP2Q9H939 334 aa20.58■□□□□ 0.89
SPIN3-220ENST00000639257 PDLIM7Q9NR12 457 aa20.58■□□□□ 0.89
SPIN3-220ENST00000639257 BARHL2Q9NY43 387 aa20.58■□□□□ 0.89
SPIN3-220ENST00000639257 ZMYND8Q9ULU4 1186 aaPredicted RBP20.58■□□□□ 0.89
SPIN3-220ENST00000639257 COLQQ9Y215 455 aaPredicted RBP20.58■□□□□ 0.89
SPIN3-220ENST00000639257 GRIN2DO15399 1336 aa20.57■□□□□ 0.88
SPIN3-220ENST00000639257 PRPF3O43395 683 aaKnown RBP20.57■□□□□ 0.88
SPIN3-220ENST00000639257 IFNAR1P17181 557 aa20.57■□□□□ 0.88
SPIN3-220ENST00000639257 CCND2P30279 289 aa20.57■□□□□ 0.88
SPIN3-220ENST00000639257 CPT1AP50416 773 aa20.57■□□□□ 0.88
SPIN3-220ENST00000639257 PURAQ00577 322 aaKnown RBP20.57■□□□□ 0.88
SPIN3-220ENST00000639257 TLE2Q04725 743 aa20.57■□□□□ 0.88
SPIN3-220ENST00000639257 PKN1Q16512 942 aa20.57■□□□□ 0.88
SPIN3-220ENST00000639257 PFKFB3Q16875 520 aaPredicted RBP20.57■□□□□ 0.88
SPIN3-220ENST00000639257 XRRA1Q6P2D8 792 aa20.57■□□□□ 0.88
SPIN3-220ENST00000639257 CXCL17Q6UXB2 119 aa20.57■□□□□ 0.88
SPIN3-220ENST00000639257 SEPT14Q6ZU15 432 aa20.57■□□□□ 0.88
SPIN3-220ENST00000639257 HEATR3Q7Z4Q2 680 aa20.57■□□□□ 0.88
SPIN3-220ENST00000639257 SEZ6LQ9BYH1 1024 aa20.57■□□□□ 0.88
SPIN3-220ENST00000639257 RBM27Q9P2N5 1060 aaKnown RBP20.57■□□□□ 0.88
SPIN3-220ENST00000639257 ATP11BQ9Y2G3 1177 aa20.57■□□□□ 0.88
SPIN3-220ENST00000639257 TRIOBPQ9H2D6 2365 aa20.56■□□□□ 0.88
SPIN3-220ENST00000639257 A0A0U1RQG5 324 aaPredicted RBP20.56■□□□□ 0.88
SPIN3-220ENST00000639257 ARVCFO00192 962 aa20.56■□□□□ 0.88
SPIN3-220ENST00000639257 ZEB2O60315 1214 aa20.56■□□□□ 0.88
SPIN3-220ENST00000639257 TGFB3P10600 412 aa20.56■□□□□ 0.88
SPIN3-220ENST00000639257 HOXD8P13378 290 aaPredicted RBP20.56■□□□□ 0.88
SPIN3-220ENST00000639257 SYN1P17600 705 aa20.56■□□□□ 0.88
SPIN3-220ENST00000639257 ICAM3P32942 547 aa20.56■□□□□ 0.88
SPIN3-220ENST00000639257 PCNX4Q63HM2 1172 aa20.56■□□□□ 0.88
SPIN3-220ENST00000639257 KCNV1Q6PIU1 500 aa20.56■□□□□ 0.88
SPIN3-220ENST00000639257 CHRDL2Q6WN34 429 aa20.56■□□□□ 0.88
SPIN3-220ENST00000639257 OR6J1Q8NGC5 347 aa20.56■□□□□ 0.88
SPIN3-220ENST00000639257 SMARCC2Q8TAQ2 1214 aa20.56■□□□□ 0.88
SPIN3-220ENST00000639257 CUL5Q93034 780 aa20.56■□□□□ 0.88
SPIN3-220ENST00000639257 RNF26Q9BY78 433 aaPredicted RBP20.56■□□□□ 0.88
SPIN3-220ENST00000639257 RIC8AQ9NPQ8 531 aa20.56■□□□□ 0.88
SPIN3-220ENST00000639257 A0A1W2PPC1 479 aa20.55■□□□□ 0.88
SPIN3-220ENST00000639257 ESYT2A0FGR8 921 aa20.55■□□□□ 0.88
SPIN3-220ENST00000639257 GH1P01241 217 aa20.55■□□□□ 0.88
SPIN3-220ENST00000639257 CLK2P49760 499 aaKnown RBP20.55■□□□□ 0.88
SPIN3-220ENST00000639257 LY6KQ17RY6 165 aa20.55■□□□□ 0.88
SPIN3-220ENST00000639257 PDRG1Q9NUG6 133 aa20.55■□□□□ 0.88
SPIN3-220ENST00000639257 POLR3EQ9NVU0 708 aa20.55■□□□□ 0.88
SPIN3-220ENST00000639257 MROH7Q68CQ1 1323 aa20.54■□□□□ 0.88
SPIN3-220ENST00000639257 KIAA0355O15063 1070 aa20.54■□□□□ 0.88
SPIN3-220ENST00000639257 MYCLP12524 364 aaPredicted RBP20.54■□□□□ 0.88
SPIN3-220ENST00000639257 SCG2P13521 617 aa20.54■□□□□ 0.88
SPIN3-220ENST00000639257 MAGEA10P43363 369 aaPredicted RBP20.54■□□□□ 0.88
SPIN3-220ENST00000639257 FAAP100Q0VG06 881 aa20.54■□□□□ 0.88
SPIN3-220ENST00000639257 SEMA3FQ13275 785 aa20.54■□□□□ 0.88
SPIN3-220ENST00000639257 HABP4Q5JVS0 413 aaKnown RBP20.54■□□□□ 0.88
SPIN3-220ENST00000639257 FAM126BQ8IXS8 530 aa20.54■□□□□ 0.88
SPIN3-220ENST00000639257 TBX21Q9UL17 535 aa20.54■□□□□ 0.88
SPIN3-220ENST00000639257 MRVI1Q9Y6F6 885 aa20.54■□□□□ 0.88
SPIN3-220ENST00000639257 TRIM43BA6NCK2 446 aa20.53■□□□□ 0.88
SPIN3-220ENST00000639257 SPATA31C2B4DYI2 1134 aa20.53■□□□□ 0.88
SPIN3-220ENST00000639257 KPNA6O60684 536 aa20.53■□□□□ 0.88
SPIN3-220ENST00000639257 CD4P01730 458 aa20.53■□□□□ 0.88
SPIN3-220ENST00000639257 CLTBP09497 229 aa20.53■□□□□ 0.88
SPIN3-220ENST00000639257 NAPAP54920 295 aa20.53■□□□□ 0.88
SPIN3-220ENST00000639257 SP2Q02086 613 aa20.53■□□□□ 0.88
SPIN3-220ENST00000639257 UBE2SQ16763 222 aa20.53■□□□□ 0.88
SPIN3-220ENST00000639257 MYSM1Q5VVJ2 828 aa20.53■□□□□ 0.88
SPIN3-220ENST00000639257 SH3RF1Q7Z6J0 888 aa20.53■□□□□ 0.88
SPIN3-220ENST00000639257 TRIM43Q96BQ3 446 aaPredicted RBP20.53■□□□□ 0.88
SPIN3-220ENST00000639257 ZMYND12Q9H0C1 365 aa20.53■□□□□ 0.88
SPIN3-220ENST00000639257 GLT8D2Q9H1C3 349 aa20.53■□□□□ 0.88
SPIN3-220ENST00000639257 NCOA5Q9HCD5 579 aaKnown RBP20.53■□□□□ 0.88
SPIN3-220ENST00000639257 NAP1L2Q9ULW6 460 aaPredicted RBP20.53■□□□□ 0.88
SPIN3-220ENST00000639257 MMP3P08254 477 aa20.52■□□□□ 0.88
SPIN3-220ENST00000639257 UBA1P22314 1058 aaKnown RBP20.52■□□□□ 0.88
SPIN3-220ENST00000639257 ITGA7Q13683 1181 aa20.52■□□□□ 0.88
SPIN3-220ENST00000639257 LAMC2Q13753 1193 aa20.52■□□□□ 0.88
SPIN3-220ENST00000639257 AFG1LQ8WV93 481 aa20.52■□□□□ 0.88
SPIN3-220ENST00000639257 PHKBQ93100 1093 aa20.52■□□□□ 0.88
SPIN3-220ENST00000639257 PCDHA6Q9UN73 950 aa20.52■□□□□ 0.88
SPIN3-220ENST00000639257 PCDHA8Q9Y5H6 950 aa20.52■□□□□ 0.88
SPIN3-220ENST00000639257 SMCO2A6NFE2 343 aa20.51■□□□□ 0.87
SPIN3-220ENST00000639257 PQBP1O60828 265 aaKnown RBP20.51■□□□□ 0.87
SPIN3-220ENST00000639257 ITGB8P26012 769 aa20.51■□□□□ 0.87
SPIN3-220ENST00000639257 CCT2P78371 535 aaKnown RBP20.51■□□□□ 0.87
SPIN3-220ENST00000639257 GNPTABQ3T906 1256 aa20.51■□□□□ 0.87
SPIN3-220ENST00000639257 BRDTQ58F21 947 aaPredicted RBP20.51■□□□□ 0.87
SPIN3-220ENST00000639257 CELF3Q5SZQ8 465 aaKnown RBP20.51■□□□□ 0.87
SPIN3-220ENST00000639257 PPTC7Q8NI37 304 aa20.51■□□□□ 0.87
SPIN3-220ENST00000639257 CRYGNQ8WXF5 182 aa20.51■□□□□ 0.87
SPIN3-220ENST00000639257 MTG1Q9BT17 334 aaPredicted RBP20.51■□□□□ 0.87
SPIN3-220ENST00000639257 UBIAD1Q9Y5Z9 338 aa20.51■□□□□ 0.87
SPIN3-220ENST00000639257 SPDYE3A6NKU9 549 aa20.5■□□□□ 0.87
SPIN3-220ENST00000639257 DCDC2CA8MYV0 355 aa20.5■□□□□ 0.87
SPIN3-220ENST00000639257 FIBPO43427 364 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms