RNA–Protein interactions for RNA: ENST00000638133.1

PPFIA1-225, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-225ENST00000638133 SNX14Q9Y5W7 946 aa17.18■□□□□ 0.34
PPFIA1-225ENST00000638133 ARIH2O95376 493 aa17.17■□□□□ 0.34
PPFIA1-225ENST00000638133 CHMP4BP1P59074 171 aa17.17■□□□□ 0.34
PPFIA1-225ENST00000638133 PURAQ00577 322 aaKnown RBP17.17■□□□□ 0.34
PPFIA1-225ENST00000638133 FPGSQ05932 587 aa17.17■□□□□ 0.34
PPFIA1-225ENST00000638133 FAM47CQ5HY64 1035 aa17.17■□□□□ 0.34
PPFIA1-225ENST00000638133 Q6ZUG5 572 aa17.17■□□□□ 0.34
PPFIA1-225ENST00000638133 HEATR3Q7Z4Q2 680 aa17.17■□□□□ 0.34
PPFIA1-225ENST00000638133 PSTPIP2Q9H939 334 aa17.17■□□□□ 0.34
PPFIA1-225ENST00000638133 CCDC196A0A1B0GTZ2 297 aa17.16■□□□□ 0.34
PPFIA1-225ENST00000638133 hCG_1642624A0A1W2PR95 340 aa17.16■□□□□ 0.34
PPFIA1-225ENST00000638133 A6NJR5 290 aa17.16■□□□□ 0.34
PPFIA1-225ENST00000638133 EPB41L2O43491 1005 aaKnown RBP17.16■□□□□ 0.34
PPFIA1-225ENST00000638133 TIMP1P01033 207 aa17.16■□□□□ 0.34
PPFIA1-225ENST00000638133 CASTP20810 708 aaKnown RBP17.16■□□□□ 0.34
PPFIA1-225ENST00000638133 GNPTABQ3T906 1256 aa17.16■□□□□ 0.34
PPFIA1-225ENST00000638133 CCDC62Q6P9F0 684 aa17.16■□□□□ 0.34
PPFIA1-225ENST00000638133 VSIG10LQ86VR7 867 aa17.16■□□□□ 0.34
PPFIA1-225ENST00000638133 FAM126BQ8IXS8 530 aa17.16■□□□□ 0.34
PPFIA1-225ENST00000638133 DHX37Q8IY37 1157 aaKnown RBP17.16■□□□□ 0.34
PPFIA1-225ENST00000638133 KCNB2Q92953 911 aa17.16■□□□□ 0.34
PPFIA1-225ENST00000638133 DDX41Q9UJV9 622 aaKnown RBP17.16■□□□□ 0.34
PPFIA1-225ENST00000638133 BRPF3Q9ULD4 1205 aa17.16■□□□□ 0.34
PPFIA1-225ENST00000638133 STAM2O75886 525 aa17.15■□□□□ 0.34
PPFIA1-225ENST00000638133 CPA1P15085 419 aa17.15■□□□□ 0.34
PPFIA1-225ENST00000638133 METAP2P50579 478 aaKnown RBP eCLIP17.15■□□□□ 0.34
PPFIA1-225ENST00000638133 RCAN1P53805 252 aa17.15■□□□□ 0.34
PPFIA1-225ENST00000638133 LAMC2Q13753 1193 aa17.15■□□□□ 0.34
PPFIA1-225ENST00000638133 LRIT3Q3SXY7 679 aa17.15■□□□□ 0.34
PPFIA1-225ENST00000638133 USP17L6PQ6QN14 398 aa17.15■□□□□ 0.34
PPFIA1-225ENST00000638133 TMEM199Q8N511 208 aa17.15■□□□□ 0.34
PPFIA1-225ENST00000638133 SLC43A3Q8NBI5 491 aa17.15■□□□□ 0.34
PPFIA1-225ENST00000638133 AFG1LQ8WV93 481 aa17.15■□□□□ 0.34
PPFIA1-225ENST00000638133 BRF1Q92994 677 aa17.15■□□□□ 0.34
PPFIA1-225ENST00000638133 PPP1R12CQ9BZL4 782 aa17.15■□□□□ 0.34
PPFIA1-225ENST00000638133 TBX21Q9UL17 535 aa17.15■□□□□ 0.34
PPFIA1-225ENST00000638133 SPDYE3A6NKU9 549 aa17.14■□□□□ 0.33
PPFIA1-225ENST00000638133 PIK3CDO00329 1044 aa17.14■□□□□ 0.33
PPFIA1-225ENST00000638133 MMP3P08254 477 aa17.14■□□□□ 0.33
PPFIA1-225ENST00000638133 SUPT20HL2P0C7V6 817 aa17.14■□□□□ 0.33
PPFIA1-225ENST00000638133 RPS6KB1P23443 525 aa17.14■□□□□ 0.33
PPFIA1-225ENST00000638133 ITGB8P26012 769 aa17.14■□□□□ 0.33
PPFIA1-225ENST00000638133 ARHGAP1Q07960 439 aa17.14■□□□□ 0.33
PPFIA1-225ENST00000638133 APOBRQ0VD83 1088 aa17.14■□□□□ 0.33
PPFIA1-225ENST00000638133 DGKDQ16760 1214 aa17.14■□□□□ 0.33
PPFIA1-225ENST00000638133 IL31RAQ8NI17 732 aa17.14■□□□□ 0.33
PPFIA1-225ENST00000638133 EHMT1Q9H9B1 1298 aa17.14■□□□□ 0.33
PPFIA1-225ENST00000638133 SOX1O00570 391 aaPredicted RBP17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 CD4P01730 458 aa17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 TGFB3P10600 412 aa17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 NAPAP54920 295 aa17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 PPIGQ13427 754 aaKnown RBP eCLIP17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 MFSD5Q6N075 450 aa17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 GPKOWQ92917 476 aaPredicted RBP eCLIP17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 LRCH3Q96II8 777 aa17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 ZFP91Q96JP5 570 aaPredicted RBP17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 TRPV6Q9H1D0 765 aa17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 ALDH8A1Q9H2A2 487 aaPredicted RBP17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 HIPK3Q9H422 1215 aa17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 MLXIPQ9HAP2 919 aa17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 NOD1Q9Y239 953 aa17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 V9GY48 417 aaPredicted RBP17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 GRIN2DO15399 1336 aa17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 CNTNAP5Q8WYK1 1306 aa17.13■□□□□ 0.33
PPFIA1-225ENST00000638133 MYH7BA7E2Y1 1941 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 hCG_1984214I3L0E3 225 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 MEIS2O14770 477 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 SORBS3O60504 671 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 B4GALT4O60513 344 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 GGPS1O95749 300 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 AKAP17AQ02040 695 aaKnown RBP17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 SHHQ15465 462 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 NBPF20Q3BBV1 942 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 XRRA1Q6P2D8 792 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 NFRKBQ6P4R8 1299 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 NLRX1Q86UT6 975 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 ZNF713Q8N859 430 aaPredicted RBP17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 EMID1Q96A84 441 aaPredicted RBP17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 SPATA33Q96N06 139 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 KATNAL1Q9BW62 490 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 RTEL1Q9NZ71 1219 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 CYP46A1Q9Y6A2 500 aa17.12■□□□□ 0.33
PPFIA1-225ENST00000638133 RANBP2P49792 3224 aaKnown RBP17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 NOP56O00567 594 aaKnown RBP17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 EIF5BO60841 1220 aaKnown RBP17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 RGS20O76081 388 aa17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 PTPN11Q06124 597 aaPredicted RBP17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 CELF3Q5SZQ8 465 aaKnown RBP17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 PCNX4Q63HM2 1172 aa17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 WWC2Q6AWC2 1192 aa17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 PPP1R18Q6NYC8 613 aa17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 RUFY3Q7L099 469 aa17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 PPTC7Q8NI37 304 aa17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 RNPC3Q96LT9 517 aaKnown RBP17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 USP26Q9BXU7 913 aa17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 TRMT13Q9NUP7 481 aaKnown RBP17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 FRMPD4Q14CM0 1322 aa17.11■□□□□ 0.33
PPFIA1-225ENST00000638133 FIBPO43427 364 aa17.1■□□□□ 0.33
PPFIA1-225ENST00000638133 UBA1P22314 1058 aaKnown RBP17.1■□□□□ 0.33
PPFIA1-225ENST00000638133 CDC27P30260 824 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms