RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 SYT1P21579 422 aa25.53■■□□□ 1.68
CHRNA7-231ENST00000637786 U2AF2P26368 475 aaKnown RBP eCLIP25.53■■□□□ 1.68
CHRNA7-231ENST00000637786 MRPS9P82933 396 aaKnown RBP25.53■■□□□ 1.68
CHRNA7-231ENST00000637786 ACVR2BQ13705 512 aa25.53■■□□□ 1.68
CHRNA7-231ENST00000637786 RBM19Q9Y4C8 960 aaKnown RBP25.53■■□□□ 1.68
CHRNA7-231ENST00000637786 ZNF865P0CJ78 1059 aaPredicted RBP25.52■■□□□ 1.68
CHRNA7-231ENST00000637786 USP11P51784 963 aa25.52■■□□□ 1.68
CHRNA7-231ENST00000637786 TRIM32Q13049 653 aa25.52■■□□□ 1.68
CHRNA7-231ENST00000637786 TBCKQ8TEA7 893 aa25.52■■□□□ 1.68
CHRNA7-231ENST00000637786 INPP4AQ96PE3 977 aaPredicted RBP25.52■■□□□ 1.68
CHRNA7-231ENST00000637786 DDX49Q9Y6V7 483 aaKnown RBP25.52■■□□□ 1.68
CHRNA7-231ENST00000637786 GNL2Q13823 731 aaKnown RBP25.51■■□□□ 1.67
CHRNA7-231ENST00000637786 PIK3AP1Q6ZUJ8 805 aa25.51■■□□□ 1.67
CHRNA7-231ENST00000637786 NOSTRINQ8IVI9 506 aa25.51■■□□□ 1.67
CHRNA7-231ENST00000637786 SPRYD3Q8NCJ5 442 aa25.51■■□□□ 1.67
CHRNA7-231ENST00000637786 ZNF333Q96JL9 665 aa25.51■■□□□ 1.67
CHRNA7-231ENST00000637786 RBM47A0AV96 593 aaKnown RBP25.5■■□□□ 1.67
CHRNA7-231ENST00000637786 CIITAP33076 1130 aa25.5■■□□□ 1.67
CHRNA7-231ENST00000637786 TAPT1Q6NXT6 567 aa25.5■■□□□ 1.67
CHRNA7-231ENST00000637786 FBXO16Q8IX29 292 aaPredicted RBP25.5■■□□□ 1.67
CHRNA7-231ENST00000637786 TRPV1Q8NER1 839 aa25.5■■□□□ 1.67
CHRNA7-231ENST00000637786 HMX1Q9NP08 348 aaPredicted RBP25.5■■□□□ 1.67
CHRNA7-231ENST00000637786 ZHX1Q9UKY1 873 aaPredicted RBP25.5■■□□□ 1.67
CHRNA7-231ENST00000637786 UBIAD1Q9Y5Z9 338 aa25.5■■□□□ 1.67
CHRNA7-231ENST00000637786 STX6O43752 255 aa25.49■■□□□ 1.67
CHRNA7-231ENST00000637786 INF2Q27J81 1249 aa25.49■■□□□ 1.67
CHRNA7-231ENST00000637786 GNPTABQ3T906 1256 aa25.49■■□□□ 1.67
CHRNA7-231ENST00000637786 CEP55Q53EZ4 464 aa25.49■■□□□ 1.67
CHRNA7-231ENST00000637786 PRAMEF19Q5SWL8 479 aa25.49■■□□□ 1.67
CHRNA7-231ENST00000637786 KCNV1Q6PIU1 500 aa25.49■■□□□ 1.67
CHRNA7-231ENST00000637786 MOXD1Q6UVY6 613 aa25.49■■□□□ 1.67
CHRNA7-231ENST00000637786 EEPD1Q7L9B9 569 aa25.49■■□□□ 1.67
CHRNA7-231ENST00000637786 NIPA1Q7RTP0 329 aa25.49■■□□□ 1.67
CHRNA7-231ENST00000637786 NEK8Q86SG6 692 aa25.49■■□□□ 1.67
CHRNA7-231ENST00000637786 SCFD2Q8WU76 684 aa25.49■■□□□ 1.67
CHRNA7-231ENST00000637786 VPS37CA5D8V6 355 aaPredicted RBP25.48■■□□□ 1.67
CHRNA7-231ENST00000637786 SEPT4O43236 478 aa25.48■■□□□ 1.67
CHRNA7-231ENST00000637786 RGS20O76081 388 aa25.48■■□□□ 1.67
CHRNA7-231ENST00000637786 ICAM3P32942 547 aa25.48■■□□□ 1.67
CHRNA7-231ENST00000637786 EARS2Q5JPH6 523 aaKnown RBP25.48■■□□□ 1.67
CHRNA7-231ENST00000637786 MCTP1Q6DN14 999 aa25.48■■□□□ 1.67
CHRNA7-231ENST00000637786 IQSEC1Q6DN90 963 aa25.48■■□□□ 1.67
CHRNA7-231ENST00000637786 NLRX1Q86UT6 975 aa25.48■■□□□ 1.67
CHRNA7-231ENST00000637786 GPRASP2Q96D09 838 aa25.48■■□□□ 1.67
CHRNA7-231ENST00000637786 NAP1L4Q99733 375 aaKnown RBP25.48■■□□□ 1.67
CHRNA7-231ENST00000637786 MXRA8Q9BRK3 442 aa25.48■■□□□ 1.67
CHRNA7-231ENST00000637786 KIF28PB7ZC32 967 aa25.47■■□□□ 1.67
CHRNA7-231ENST00000637786 MAFGO15525 162 aa25.47■■□□□ 1.67
CHRNA7-231ENST00000637786 TGFB3P10600 412 aa25.47■■□□□ 1.67
CHRNA7-231ENST00000637786 AKR1A1P14550 325 aa25.47■■□□□ 1.67
CHRNA7-231ENST00000637786 ITGB5P18084 799 aa25.47■■□□□ 1.67
CHRNA7-231ENST00000637786 CCDC144BQ3MJ40 725 aa25.47■■□□□ 1.67
CHRNA7-231ENST00000637786 COL13A1Q5TAT6 717 aaPredicted RBP25.47■■□□□ 1.67
CHRNA7-231ENST00000637786 CDHR1Q96JP9 859 aa25.47■■□□□ 1.67
CHRNA7-231ENST00000637786 JADE2Q9NQC1 790 aa25.47■■□□□ 1.67
CHRNA7-231ENST00000637786 RTEL1Q9NZ71 1219 aa25.47■■□□□ 1.67
CHRNA7-231ENST00000637786 DAXXQ9UER7 740 aaPredicted RBP25.47■■□□□ 1.67
CHRNA7-231ENST00000637786 FAM184BQ9ULE4 1060 aa25.47■■□□□ 1.67
CHRNA7-231ENST00000637786 MTMR6Q9Y217 621 aa25.47■■□□□ 1.67
CHRNA7-231ENST00000637786 CYP3A7-CYP3A51PA0A087WV96 503 aa25.46■■□□□ 1.67
CHRNA7-231ENST00000637786 FAM205CA6NFA0 338 aa25.46■■□□□ 1.67
CHRNA7-231ENST00000637786 MEIS1O00470 390 aa25.46■■□□□ 1.67
CHRNA7-231ENST00000637786 FIBPO43427 364 aa25.46■■□□□ 1.67
CHRNA7-231ENST00000637786 EDIL3O43854 480 aa25.46■■□□□ 1.67
CHRNA7-231ENST00000637786 MSCO60682 206 aa25.46■■□□□ 1.67
CHRNA7-231ENST00000637786 GCFC2P16383 781 aaKnown RBP25.46■■□□□ 1.67
CHRNA7-231ENST00000637786 CYP3A7P24462 503 aa25.46■■□□□ 1.67
CHRNA7-231ENST00000637786 CCND3P30281 292 aaPredicted RBP25.46■■□□□ 1.67
CHRNA7-231ENST00000637786 ZNF76P36508 570 aa25.46■■□□□ 1.67
CHRNA7-231ENST00000637786 TRAPPC10P48553 1259 aa25.46■■□□□ 1.67
CHRNA7-231ENST00000637786 SEPT14Q6ZU15 432 aa25.46■■□□□ 1.67
CHRNA7-231ENST00000637786 PDGFCQ9NRA1 345 aa25.46■■□□□ 1.67
CHRNA7-231ENST00000637786 CENPFP49454 3210 aa25.45■■□□□ 1.67
CHRNA7-231ENST00000637786 SPATA31C2B4DYI2 1134 aa25.45■■□□□ 1.66
CHRNA7-231ENST00000637786 SETQ01105 290 aaPredicted RBP25.45■■□□□ 1.66
CHRNA7-231ENST00000637786 TTLL4Q14679 1199 aa25.45■■□□□ 1.66
CHRNA7-231ENST00000637786 PPP4R3AQ6IN85 833 aa25.45■■□□□ 1.66
CHRNA7-231ENST00000637786 CCDC62Q6P9F0 684 aa25.45■■□□□ 1.66
CHRNA7-231ENST00000637786 BRAPQ7Z569 592 aa25.45■■□□□ 1.66
CHRNA7-231ENST00000637786 MBOAT7Q96N66 472 aa25.45■■□□□ 1.66
CHRNA7-231ENST00000637786 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.45■■□□□ 1.66
CHRNA7-231ENST00000637786 UNC93B1Q9H1C4 597 aa25.45■■□□□ 1.66
CHRNA7-231ENST00000637786 PAK6Q9NQU5 681 aaPredicted RBP25.45■■□□□ 1.66
CHRNA7-231ENST00000637786 IGLV3-22A0A075B6J6 115 aa25.44■■□□□ 1.66
CHRNA7-231ENST00000637786 FAM86B1E9PN63 330 aa25.44■■□□□ 1.66
CHRNA7-231ENST00000637786 NKRFO15226 690 aaKnown RBP eCLIP25.44■■□□□ 1.66
CHRNA7-231ENST00000637786 FAM86B2P0C5J1 330 aa25.44■■□□□ 1.66
CHRNA7-231ENST00000637786 CCL5P13501 91 aa25.44■■□□□ 1.66
CHRNA7-231ENST00000637786 CNGA1P29973 690 aa25.44■■□□□ 1.66
CHRNA7-231ENST00000637786 ADCYAP1R1P41586 468 aa25.44■■□□□ 1.66
CHRNA7-231ENST00000637786 MTMR1Q13613 665 aa25.44■■□□□ 1.66
CHRNA7-231ENST00000637786 ZFP91Q96JP5 570 aaPredicted RBP25.44■■□□□ 1.66
CHRNA7-231ENST00000637786 WDR11Q9BZH6 1224 aa25.44■■□□□ 1.66
CHRNA7-231ENST00000637786 NOL7Q9UMY1 257 aaKnown RBP25.44■■□□□ 1.66
CHRNA7-231ENST00000637786 MRVI1Q9Y6F6 885 aa25.44■■□□□ 1.66
CHRNA7-231ENST00000637786 TNFAIP2Q03169 654 aa25.43■■□□□ 1.66
CHRNA7-231ENST00000637786 MTFR1Q15390 333 aa25.43■■□□□ 1.66
CHRNA7-231ENST00000637786 LETM2Q2VYF4 491 aa25.43■■□□□ 1.66
CHRNA7-231ENST00000637786 Q4G0T1 1027 aa25.43■■□□□ 1.66
CHRNA7-231ENST00000637786 DUSP28Q4G0W2 176 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms