RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 HDLBPQ00341 1268 aaKnown RBP22.32■■□□□ 1.16
CACNA1A-243ENST00000637616 CENPPQ6IPU0 288 aa22.32■■□□□ 1.16
CACNA1A-243ENST00000637616 PPANQ9NQ55 473 aaKnown RBP22.32■■□□□ 1.16
CACNA1A-243ENST00000637616 ARAP2Q8WZ64 1704 aa22.32■■□□□ 1.16
CACNA1A-243ENST00000637616 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.32■■□□□ 1.16
CACNA1A-243ENST00000637616 MEFVO15553 781 aaPredicted RBP22.32■■□□□ 1.16
CACNA1A-243ENST00000637616 NR1D1P20393 614 aa22.32■■□□□ 1.16
CACNA1A-243ENST00000637616 CNNM4Q6P4Q7 775 aa22.32■■□□□ 1.16
CACNA1A-243ENST00000637616 JPH2Q9BR39 696 aaPredicted RBP22.32■■□□□ 1.16
CACNA1A-243ENST00000637616 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.32■■□□□ 1.16
CACNA1A-243ENST00000637616 NTSR2O95665 410 aa22.32■■□□□ 1.16
CACNA1A-243ENST00000637616 FNTAP49354 379 aa22.32■■□□□ 1.16
CACNA1A-243ENST00000637616 B4GALNT4Q76KP1 1039 aa22.32■■□□□ 1.16
CACNA1A-243ENST00000637616 PACSIN1Q9BY11 444 aa22.32■■□□□ 1.16
CACNA1A-243ENST00000637616 LCA5LO95447 670 aa22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 NAPAP54920 295 aa22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 IFT88Q13099 833 aa22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 CEP85LQ5SZL2 805 aa22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 HGSNATQ68CP4 663 aa22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 ZNF473Q8WTR7 871 aaKnown RBP22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 CEP89Q96ST8 783 aa22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 CD248Q9HCU0 757 aa22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 GDF3Q9NR23 364 aa22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 PCP11498 1178 aaKnown RBP22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 KLRC1P26715 233 aa22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 MAN2A1Q16706 1144 aa22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 INTS5Q6P9B9 1019 aaKnown RBP22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 EPN3Q9H201 632 aa22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 BARHL2Q9NY43 387 aa22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 BIN2Q9UBW5 565 aaPredicted RBP22.31■■□□□ 1.16
CACNA1A-243ENST00000637616 KCNMA1Q12791 1236 aa22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 ASTE1Q2TB18 679 aaPredicted RBP22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 SWT1Q5T5J6 900 aaKnown RBP22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 PDXDC1Q6P996 788 aa22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 TMED8Q6PL24 325 aaPredicted RBP22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 CNPY4Q8N129 248 aa22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 PRPF38AQ8NAV1 312 aaKnown RBP22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 CCT8L2Q96SF2 557 aa22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 SH3GLB2Q9NR46 395 aa22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 MINPP1Q9UNW1 487 aa22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 CACNA1SQ13698 1873 aa22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 E7EVH7 732 aa22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 TLR2O60603 784 aa22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 BICDL1Q6ZP65 573 aa22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 DDX42Q86XP3 938 aaKnown RBP eCLIP22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 CELF1Q92879 486 aaKnown RBP22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 MKNK2Q9HBH9 465 aa22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 TMEM260Q9NX78 707 aa22.3■■□□□ 1.16
CACNA1A-243ENST00000637616 KDM7AQ6ZMT4 941 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 BTG4Q9NY30 223 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 TBC1D7Q9P0N9 293 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 PLAAQ9Y263 795 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 FAM170AA1A519 330 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 RAD51CO43502 376 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 PPP1R37O75864 691 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 ADAMTS2O95450 1211 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 PAK2Q13177 524 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 HLTFQ14527 1009 aaKnown RBP eCLIP22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 ERFEQ4G0M1 354 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 SMIM5Q71RC9 77 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 SV2BQ7L1I2 683 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 CCDC24Q8N4L8 307 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 TBC1D5Q92609 795 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 SMCO2A6NFE2 343 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 CAMTA2O94983 1202 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 CRKLP46109 303 aaKnown RBP22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 PTGISQ16647 500 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 CCDC91Q7Z6B0 441 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 GJA10Q969M2 543 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 NUDT12Q9BQG2 462 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 BLOC1S4Q9NUP1 217 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 BCL9O00512 1426 aa22.29■■□□□ 1.16
CACNA1A-243ENST00000637616 POLR2FP61218 127 aaKnown RBP22.28■■□□□ 1.16
CACNA1A-243ENST00000637616 AMPD3Q01432 767 aa22.28■■□□□ 1.16
CACNA1A-243ENST00000637616 CCDC84Q86UT8 332 aaPredicted RBP22.28■■□□□ 1.16
CACNA1A-243ENST00000637616 TBCKQ8TEA7 893 aa22.28■■□□□ 1.16
CACNA1A-243ENST00000637616 BCCIPQ9P287 314 aaKnown RBP eCLIP22.28■■□□□ 1.16
CACNA1A-243ENST00000637616 PJA2O43164 708 aa22.28■■□□□ 1.16
CACNA1A-243ENST00000637616 GRB10Q13322 594 aa22.28■■□□□ 1.16
CACNA1A-243ENST00000637616 GRM4Q14833 912 aa22.28■■□□□ 1.16
CACNA1A-243ENST00000637616 NLRP14Q86W24 1093 aa22.28■■□□□ 1.16
CACNA1A-243ENST00000637616 CALML4Q96GE6 196 aa22.28■■□□□ 1.16
CACNA1A-243ENST00000637616 ACSBG1Q96GR2 724 aa22.28■■□□□ 1.16
CACNA1A-243ENST00000637616 CUEDC2Q9H467 287 aa22.28■■□□□ 1.16
CACNA1A-243ENST00000637616 ADAMTS1Q9UHI8 967 aa22.28■■□□□ 1.16
CACNA1A-243ENST00000637616 POTEMA6NI47 508 aa22.27■■□□□ 1.16
CACNA1A-243ENST00000637616 TAF1P21675 1872 aa22.27■■□□□ 1.16
CACNA1A-243ENST00000637616 ATP6V1AP38606 617 aa22.27■■□□□ 1.16
CACNA1A-243ENST00000637616 PRPHP41219 470 aa22.27■■□□□ 1.16
CACNA1A-243ENST00000637616 MYCBPAPQ8TBZ2 947 aa22.27■■□□□ 1.16
CACNA1A-243ENST00000637616 KLRF2D3W0D1 207 aa22.27■■□□□ 1.16
CACNA1A-243ENST00000637616 TSPY3P0CV98 308 aa22.27■■□□□ 1.16
CACNA1A-243ENST00000637616 TSPY8P0CW00 308 aa22.27■■□□□ 1.16
CACNA1A-243ENST00000637616 NONOQ15233 471 aaKnown RBP eCLIP22.27■■□□□ 1.16
CACNA1A-243ENST00000637616 CABS1Q96KC9 395 aa22.27■■□□□ 1.16
CACNA1A-243ENST00000637616 ATP6V1G3Q96LB4 118 aa22.27■■□□□ 1.16
CACNA1A-243ENST00000637616 ARPP21Q9UBL0 812 aaPredicted RBP22.27■■□□□ 1.16
CACNA1A-243ENST00000637616 ANKRD36CQ5JPF3 1778 aa22.27■■□□□ 1.16
CACNA1A-243ENST00000637616 MDH1P40925 334 aaKnown RBP22.27■■□□□ 1.15
CACNA1A-243ENST00000637616 KCNK18Q7Z418 384 aa22.27■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms