RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 DSCC1Q9BVC3 393 aa10.29□□□□□ -0.76
CLN8-214ENST00000637594 RWDD1Q9H446 243 aaPredicted RBP10.29□□□□□ -0.76
CLN8-214ENST00000637594 KAT14Q9H8E8 782 aa10.29□□□□□ -0.76
CLN8-214ENST00000637594 JMJD4Q9H9V9 463 aa10.29□□□□□ -0.76
CLN8-214ENST00000637594 COL20A1Q9P218 1284 aa10.29□□□□□ -0.76
CLN8-214ENST00000637594 GTF2IRD1Q9UHL9 959 aa10.29□□□□□ -0.76
CLN8-214ENST00000637594 NEDD4P46934 1319 aa10.29□□□□□ -0.76
CLN8-214ENST00000637594 TTC28Q96AY4 2481 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 RFXAPO00287 272 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 HIP1O00291 1037 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 TLL1O43897 1013 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 LPXNO60711 386 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 EFCAB14O75071 495 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 KDM4AO75164 1064 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 NR3C2P08235 984 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 TGFB3P10600 412 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 CKBP12277 381 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 HSD17B4P51659 736 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 NUCB1Q02818 461 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 PTK7Q13308 1070 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 QRICH1Q2TAL8 776 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 CNKSR3Q6P9H4 555 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 KCNV1Q6PIU1 500 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 SEPT14Q6ZU15 432 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 STOX1Q6ZVD7 989 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 FBXO11Q86XK2 927 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 ENAHQ8N8S7 591 aaPredicted RBP10.28□□□□□ -0.76
CLN8-214ENST00000637594 DHX38Q92620 1227 aaKnown RBP10.28□□□□□ -0.76
CLN8-214ENST00000637594 ZKSCAN3Q9BRR0 538 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 KATNAL1Q9BW62 490 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 C1QTNF1Q9BXJ1 281 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 CPVLQ9H3G5 476 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 PXMP2Q9NR77 195 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 CTNNA3Q9UI47 895 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 NOD1Q9Y239 953 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 ARIH1Q9Y4X5 557 aaPredicted RBP10.28□□□□□ -0.76
CLN8-214ENST00000637594 XIRP2A4UGR9 3374 aa10.28□□□□□ -0.76
CLN8-214ENST00000637594 OPLAHO14841 1288 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 NBNO60934 754 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 RGS20O76081 388 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 ARHGEF15O94989 841 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 F2P00734 622 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 PARP1P09874 1014 aaKnown RBP10.27□□□□□ -0.77
CLN8-214ENST00000637594 KCNJ6P48051 423 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 WDR5P61964 334 aaKnown RBP10.27□□□□□ -0.77
CLN8-214ENST00000637594 TFF2Q03403 129 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 GRB10Q13322 594 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 TRIM71Q2Q1W2 868 aaKnown RBP10.27□□□□□ -0.77
CLN8-214ENST00000637594 ARHGEF16Q5VV41 709 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 MYSM1Q5VVJ2 828 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 TRAF7Q6Q0C0 670 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 LRRC8DQ7L1W4 858 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 VSIG10LQ86VR7 867 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 CHD1LQ86WJ1 897 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 C7orf31Q8N865 590 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 PPP1R13LQ8WUF5 828 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 HLA-CQ95604 372 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 RAD9AQ99638 391 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 AMNQ9BXJ7 453 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 KRT23Q9C075 422 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 LNPKQ9C0E8 428 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 CNNM2Q9H8M5 875 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 HDAC6Q9UBN7 1215 aa10.27□□□□□ -0.77
CLN8-214ENST00000637594 MYO9BQ13459 2157 aa10.26□□□□□ -0.77
CLN8-214ENST00000637594 GBF1Q92538 1859 aa10.26□□□□□ -0.77
CLN8-214ENST00000637594 PALM3A6NDB9 673 aaPredicted RBP10.26□□□□□ -0.77
CLN8-214ENST00000637594 GJB5O95377 273 aa10.26□□□□□ -0.77
CLN8-214ENST00000637594 PSEN2P49810 448 aa10.26□□□□□ -0.77
CLN8-214ENST00000637594 ERVK-21P61565 698 aa10.26□□□□□ -0.77
CLN8-214ENST00000637594 TRAF1Q13077 416 aa10.26□□□□□ -0.77
CLN8-214ENST00000637594 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
CLN8-214ENST00000637594 IKBKEQ14164 716 aa10.26□□□□□ -0.77
CLN8-214ENST00000637594 SEC23AQ15436 765 aa10.26□□□□□ -0.77
CLN8-214ENST00000637594 IMMTQ16891 758 aaKnown RBP10.26□□□□□ -0.77
CLN8-214ENST00000637594 CELF3Q5SZQ8 465 aaKnown RBP10.26□□□□□ -0.77
CLN8-214ENST00000637594 CWC27Q6UX04 472 aaKnown RBP10.26□□□□□ -0.77
CLN8-214ENST00000637594 DHX37Q8IY37 1157 aaKnown RBP10.26□□□□□ -0.77
CLN8-214ENST00000637594 ARNTL2Q8WYA1 636 aa10.26□□□□□ -0.77
CLN8-214ENST00000637594 CERS4Q9HA82 394 aa10.26□□□□□ -0.77
CLN8-214ENST00000637594 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.25□□□□□ -0.77
CLN8-214ENST00000637594 B4E1Z4 1266 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 KLRF2D3W0D1 207 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 ZBTB5O15062 677 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 IGHDP01880 384 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 EIF2AK2P19525 551 aaKnown RBP10.25□□□□□ -0.77
CLN8-214ENST00000637594 HOXC8P31273 242 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 KCNQ1P51787 676 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 MFSD10Q14728 455 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 KIAA0753Q2KHM9 967 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 TCTN1Q2MV58 587 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 STAG2Q8N3U4 1231 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 PDCD2LQ9BRP1 358 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 C16orf70Q9BSU1 422 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 VAT1LQ9HCJ6 419 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 MAD2L2Q9UI95 211 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 MRVI1Q9Y6F6 885 aa10.25□□□□□ -0.77
CLN8-214ENST00000637594 SCN5AQ14524 2016 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 LCHNA4D1U4 455 aa10.24□□□□□ -0.77
CLN8-214ENST00000637594 PPP1R11O60927 126 aaPredicted RBP10.24□□□□□ -0.77
CLN8-214ENST00000637594 CFBP00751 764 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms