RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 ESYT2A0FGR8 921 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 ERLIN1O75477 346 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 PLEKHA8P1O95397 391 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 SLFN14P0C7P3 912 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 PSMD2Q13200 908 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 COG2Q14746 738 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 WDR44Q5JSH3 913 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 FAM83BQ5T0W9 1011 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 XRRA1Q6P2D8 792 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 MYOCDQ8IZQ8 938 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 PIP4P2Q8N4L2 257 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 SLC44A5Q8NCS7 719 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 LMBR1Q8WVP7 490 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 DEFB129Q9H1M3 183 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 LUC7L2Q9Y383 392 aaKnown RBP6.13□□□□□ -1.43
CHD2-227ENST00000637572 CEP83Q9Y592 693 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 MRVI1Q9Y6F6 885 aa6.13□□□□□ -1.43
CHD2-227ENST00000637572 N4BP1O75113 896 aaKnown RBP6.12□□□□□ -1.43
CHD2-227ENST00000637572 ERCC5P28715 1186 aaPredicted RBP6.12□□□□□ -1.43
CHD2-227ENST00000637572 TUBB4BP68371 445 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 UBXN1Q04323 297 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 TFDP1Q14186 410 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 STOX1Q6ZVD7 989 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 GPBP1Q86WP2 473 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 PXYLP1Q8TE99 480 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 LARP4BQ92615 738 aaKnown RBP6.12□□□□□ -1.43
CHD2-227ENST00000637572 MRRFQ96E11 262 aaKnown RBP6.12□□□□□ -1.43
CHD2-227ENST00000637572 ABHD8Q96I13 439 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 ACAD9Q9H845 621 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 MRPL44Q9H9J2 332 aaKnown RBP6.12□□□□□ -1.43
CHD2-227ENST00000637572 SERTAD1Q9UHV2 236 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 CUL9Q8IWT3 2517 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 RCCD1A6NED2 376 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 CD2BP2O95400 341 aaKnown RBP6.12□□□□□ -1.43
CHD2-227ENST00000637572 PAFAH1B1P43034 410 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 SNX16P57768 344 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 CXCL9Q07325 125 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 SNAPC2Q13487 334 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 STXBP2Q15833 593 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 HSP90B2PQ58FF3 399 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 ANGEL2Q5VTE6 544 aaKnown RBP6.12□□□□□ -1.43
CHD2-227ENST00000637572 CLEC17AQ6ZS10 378 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 DEPTORQ8TB45 409 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 SYMPKQ92797 1274 aaKnown RBP6.12□□□□□ -1.43
CHD2-227ENST00000637572 COA7Q96BR5 231 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 FAM167AQ96KS9 214 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 PLIN2Q99541 437 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 NOC4LQ9BVI4 516 aaKnown RBP6.12□□□□□ -1.43
CHD2-227ENST00000637572 AP5M1Q9H0R1 490 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 GBP3Q9H0R5 595 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 RIC8AQ9NPQ8 531 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 GGA3Q9NZ52 723 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 TRPM3Q9HCF6 1732 aaPredicted RBP6.12□□□□□ -1.43
CHD2-227ENST00000637572 TCRBV5S4A2TA0A5A2 114 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 LARGE1O95461 756 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 SLC25A27O95847 323 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 PSAPP07602 524 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 HOXD10P28358 340 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 SFNP31947 248 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 KRT76Q01546 638 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 SLFNL1Q499Z3 407 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 DACT2Q5SW24 774 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 KIFAP3Q92845 792 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 DRC1Q96MC2 740 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.12□□□□□ -1.43
CHD2-227ENST00000637572 MMRN2Q9H8L6 949 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 ZNF215Q9UL58 517 aaPredicted RBP6.12□□□□□ -1.43
CHD2-227ENST00000637572 CLIC4Q9Y696 253 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 GAKO14976 1311 aa6.12□□□□□ -1.43
CHD2-227ENST00000637572 PTPREP23469 700 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 TBC1D8BQ0IIM8 1120 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 QRICH1Q2TAL8 776 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 XKR9Q5GH70 373 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 RSPH3Q86UC2 560 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 SCYL3Q8IZE3 742 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 ADGRF4Q8IZF3 695 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 PDCD7Q8N8D1 485 aaKnown RBP6.11□□□□□ -1.43
CHD2-227ENST00000637572 STK32AQ8WU08 396 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 CPLX3Q8WVH0 158 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 SLC7A3Q8WY07 619 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 DPF3Q92784 378 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 DHTKD1Q96HY7 919 aaPredicted RBP6.11□□□□□ -1.43
CHD2-227ENST00000637572 TEX13BQ9BXU2 312 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 PCDHA6Q9UN73 950 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 PCDHA8Q9Y5H6 950 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 NHSL1Q5SYE7 1610 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 ASB14A6NK59 587 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 DDX39AO00148 427 aaKnown RBP6.11□□□□□ -1.43
CHD2-227ENST00000637572 TBX3O15119 743 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 GCNT3O95395 438 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 VIL1P09327 827 aaKnown RBP6.11□□□□□ -1.43
CHD2-227ENST00000637572 YBX3P16989 372 aaKnown RBP eCLIP6.11□□□□□ -1.43
CHD2-227ENST00000637572 KLRK1P26718 216 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 USP8P40818 1118 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 YWHAEP62258 255 aaKnown RBP6.11□□□□□ -1.43
CHD2-227ENST00000637572 DMP1Q13316 513 aaPredicted RBP6.11□□□□□ -1.43
CHD2-227ENST00000637572 NEDD9Q14511 834 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 FAM26FQ5R3K3 315 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 FAM178BQ8IXR5 827 aa6.11□□□□□ -1.43
CHD2-227ENST00000637572 CCDC51Q96ER9 411 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms