RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 PCDHA1Q9Y5I3 950 aa21.48■■□□□ 1.03
CLN6-220ENST00000637450 CHD7Q9P2D1 2997 aa21.47■■□□□ 1.03
CLN6-220ENST00000637450 ATP2A2P16615 1042 aaKnown RBP21.47■■□□□ 1.03
CLN6-220ENST00000637450 CASTP20810 708 aaKnown RBP21.47■■□□□ 1.03
CLN6-220ENST00000637450 BFSP2Q13515 415 aa21.47■■□□□ 1.03
CLN6-220ENST00000637450 ADGRE1Q14246 886 aa21.47■■□□□ 1.03
CLN6-220ENST00000637450 SLC35G1Q2M3R5 365 aa21.47■■□□□ 1.03
CLN6-220ENST00000637450 STOX1Q6ZVD7 989 aa21.47■■□□□ 1.03
CLN6-220ENST00000637450 SESTD1Q86VW0 696 aa21.47■■□□□ 1.03
CLN6-220ENST00000637450 SAMD3Q8N6K7 520 aa21.47■■□□□ 1.03
CLN6-220ENST00000637450 EMID1Q96A84 441 aaPredicted RBP21.47■■□□□ 1.03
CLN6-220ENST00000637450 IFIT3O14879 490 aaKnown RBP21.46■■□□□ 1.03
CLN6-220ENST00000637450 CHMP4BP1P59074 171 aa21.46■■□□□ 1.03
CLN6-220ENST00000637450 GRM4Q14833 912 aa21.46■■□□□ 1.03
CLN6-220ENST00000637450 PTGISQ16647 500 aa21.46■■□□□ 1.03
CLN6-220ENST00000637450 DGKDQ16760 1214 aa21.46■■□□□ 1.03
CLN6-220ENST00000637450 CTAGE1Q96RT6 745 aa21.46■■□□□ 1.03
CLN6-220ENST00000637450 RIOX1Q9H6W3 641 aa21.46■■□□□ 1.03
CLN6-220ENST00000637450 NOD1Q9Y239 953 aa21.46■■□□□ 1.03
CLN6-220ENST00000637450 RGS20O76081 388 aa21.45■■□□□ 1.02
CLN6-220ENST00000637450 ACTN1P12814 892 aa21.45■■□□□ 1.02
CLN6-220ENST00000637450 MYOGP15173 224 aa21.45■■□□□ 1.02
CLN6-220ENST00000637450 LAMC2Q13753 1193 aa21.45■■□□□ 1.02
CLN6-220ENST00000637450 PDCD2LQ9BRP1 358 aa21.45■■□□□ 1.02
CLN6-220ENST00000637450 SENP2Q9HC62 589 aa21.45■■□□□ 1.02
CLN6-220ENST00000637450 MRVI1Q9Y6F6 885 aa21.45■■□□□ 1.02
CLN6-220ENST00000637450 TAF6LQ9Y6J9 622 aa21.45■■□□□ 1.02
CLN6-220ENST00000637450 ERICH2A1L162 156 aa21.44■■□□□ 1.02
CLN6-220ENST00000637450 E7EWF7 191 aa21.44■■□□□ 1.02
CLN6-220ENST00000637450 SGSM2O43147 1006 aa21.44■■□□□ 1.02
CLN6-220ENST00000637450 TROAPQ12815 778 aa21.44■■□□□ 1.02
CLN6-220ENST00000637450 TRAF1Q13077 416 aa21.44■■□□□ 1.02
CLN6-220ENST00000637450 GDF6Q6KF10 455 aaPredicted RBP21.44■■□□□ 1.02
CLN6-220ENST00000637450 VSIG10LQ86VR7 867 aa21.44■■□□□ 1.02
CLN6-220ENST00000637450 NCOA7Q8NI08 942 aa21.44■■□□□ 1.02
CLN6-220ENST00000637450 PPTC7Q8NI37 304 aa21.44■■□□□ 1.02
CLN6-220ENST00000637450 PIGSQ96S52 555 aa21.44■■□□□ 1.02
CLN6-220ENST00000637450 MYO9BQ13459 2157 aa21.44■■□□□ 1.02
CLN6-220ENST00000637450 TTC28Q96AY4 2481 aa21.44■■□□□ 1.02
CLN6-220ENST00000637450 MYCLP12524 364 aaPredicted RBP21.43■■□□□ 1.02
CLN6-220ENST00000637450 HOXA13P31271 388 aaPredicted RBP21.43■■□□□ 1.02
CLN6-220ENST00000637450 WTAPQ15007 396 aa21.43■■□□□ 1.02
CLN6-220ENST00000637450 PPP2R2DQ66LE6 453 aa21.43■■□□□ 1.02
CLN6-220ENST00000637450 RALYLQ86SE5 291 aaKnown RBP21.43■■□□□ 1.02
CLN6-220ENST00000637450 HOMER1Q86YM7 354 aa21.43■■□□□ 1.02
CLN6-220ENST00000637450 DHX37Q8IY37 1157 aaKnown RBP21.43■■□□□ 1.02
CLN6-220ENST00000637450 CCDC155Q8N6L0 562 aa21.43■■□□□ 1.02
CLN6-220ENST00000637450 CAGE1Q8TC20 777 aa21.43■■□□□ 1.02
CLN6-220ENST00000637450 PHOSPHO2Q8TCD6 241 aa21.43■■□□□ 1.02
CLN6-220ENST00000637450 PPM1EQ8WY54 764 aa21.43■■□□□ 1.02
CLN6-220ENST00000637450 SYMPKQ92797 1274 aaKnown RBP21.43■■□□□ 1.02
CLN6-220ENST00000637450 FTOQ9C0B1 505 aaKnown RBP eCLIP21.43■■□□□ 1.02
CLN6-220ENST00000637450 PRDM6Q9NQX0 595 aa21.43■■□□□ 1.02
CLN6-220ENST00000637450 GTF2IRD1Q9UHL9 959 aa21.43■■□□□ 1.02
CLN6-220ENST00000637450 PNMA6FA0A0J9YX94 578 aa21.42■■□□□ 1.02
CLN6-220ENST00000637450 CYTH3O43739 400 aa21.42■■□□□ 1.02
CLN6-220ENST00000637450 IGFBP4P22692 258 aa21.42■■□□□ 1.02
CLN6-220ENST00000637450 PSEN2P49810 448 aa21.42■■□□□ 1.02
CLN6-220ENST00000637450 SART3Q15020 963 aaKnown RBP21.42■■□□□ 1.02
CLN6-220ENST00000637450 PGM5Q15124 567 aa21.42■■□□□ 1.02
CLN6-220ENST00000637450 TMEM67Q5HYA8 995 aa21.42■■□□□ 1.02
CLN6-220ENST00000637450 KCNV1Q6PIU1 500 aa21.42■■□□□ 1.02
CLN6-220ENST00000637450 AFAP1L1Q8TED9 768 aa21.42■■□□□ 1.02
CLN6-220ENST00000637450 MAP4K1Q92918 833 aa21.42■■□□□ 1.02
CLN6-220ENST00000637450 HDAC6Q9UBN7 1215 aa21.42■■□□□ 1.02
CLN6-220ENST00000637450 GCOM1H8Y6P7 765 aaPredicted RBP21.41■■□□□ 1.02
CLN6-220ENST00000637450 HAS3O00219 553 aa21.41■■□□□ 1.02
CLN6-220ENST00000637450 POLR2MP0CAP2 368 aa21.41■■□□□ 1.02
CLN6-220ENST00000637450 HOXD8P13378 290 aaPredicted RBP21.41■■□□□ 1.02
CLN6-220ENST00000637450 IRX6P78412 446 aaPredicted RBP21.41■■□□□ 1.02
CLN6-220ENST00000637450 GPNMBQ14956 572 aa21.41■■□□□ 1.02
CLN6-220ENST00000637450 MYSM1Q5VVJ2 828 aa21.41■■□□□ 1.02
CLN6-220ENST00000637450 C7orf31Q8N865 590 aa21.41■■□□□ 1.02
CLN6-220ENST00000637450 IGDCC4Q8TDY8 1250 aa21.41■■□□□ 1.02
CLN6-220ENST00000637450 DHX38Q92620 1227 aaKnown RBP21.41■■□□□ 1.02
CLN6-220ENST00000637450 SLC9A7Q96T83 725 aa21.41■■□□□ 1.02
CLN6-220ENST00000637450 KATNAL1Q9BW62 490 aa21.41■■□□□ 1.02
CLN6-220ENST00000637450 PPFIA4O75335 1185 aa21.4■■□□□ 1.02
CLN6-220ENST00000637450 F2P00734 622 aa21.4■■□□□ 1.02
CLN6-220ENST00000637450 TGFB3P10600 412 aa21.4■■□□□ 1.02
CLN6-220ENST00000637450 SELPP16109 830 aa21.4■■□□□ 1.02
CLN6-220ENST00000637450 ANTXR2P58335 489 aa21.4■■□□□ 1.02
CLN6-220ENST00000637450 RBL2Q08999 1139 aa21.4■■□□□ 1.02
CLN6-220ENST00000637450 MFSD10Q14728 455 aa21.4■■□□□ 1.02
CLN6-220ENST00000637450 TJAP1Q5JTD0 557 aa21.4■■□□□ 1.02
CLN6-220ENST00000637450 CELF3Q5SZQ8 465 aaKnown RBP21.4■■□□□ 1.02
CLN6-220ENST00000637450 IL31RAQ8NI17 732 aa21.4■■□□□ 1.02
CLN6-220ENST00000637450 ALG1Q9BT22 464 aa21.4■■□□□ 1.02
CLN6-220ENST00000637450 BAIAP3O94812 1187 aa21.39■■□□□ 1.01
CLN6-220ENST00000637450 CA3P07451 260 aa21.39■■□□□ 1.01
CLN6-220ENST00000637450 SP2Q02086 613 aa21.39■■□□□ 1.01
CLN6-220ENST00000637450 CCDC85BQ15834 202 aaPredicted RBP21.39■■□□□ 1.01
CLN6-220ENST00000637450 KIAA0753Q2KHM9 967 aa21.39■■□□□ 1.01
CLN6-220ENST00000637450 CATIPQ7Z7H3 387 aa21.39■■□□□ 1.01
CLN6-220ENST00000637450 FCHSD1Q86WN1 690 aa21.39■■□□□ 1.01
CLN6-220ENST00000637450 MB21D2Q8IYB1 491 aaPredicted RBP21.39■■□□□ 1.01
CLN6-220ENST00000637450 PARNO95453 639 aaKnown RBP21.38■■□□□ 1.01
CLN6-220ENST00000637450 GGPS1O95749 300 aa21.38■■□□□ 1.01
CLN6-220ENST00000637450 ZNF286BP0CG31 522 aa21.38■■□□□ 1.01
CLN6-220ENST00000637450 CCND2P30279 289 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms