RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 PLEKHA8P1O95397 391 aa17.47■□□□□ 0.39
CLN8-209ENST00000635970 ERCC3P19447 782 aa17.47■□□□□ 0.39
CLN8-209ENST00000635970 FCGRTP55899 365 aa17.47■□□□□ 0.39
CLN8-209ENST00000635970 ELOA2Q8IYF1 753 aaPredicted RBP17.47■□□□□ 0.39
CLN8-209ENST00000635970 CTCFLQ8NI51 663 aaPredicted RBP17.47■□□□□ 0.39
CLN8-209ENST00000635970 AGBL1Q96MI9 1066 aa17.47■□□□□ 0.39
CLN8-209ENST00000635970 NCOA5Q9HCD5 579 aaKnown RBP17.47■□□□□ 0.39
CLN8-209ENST00000635970 VAT1LQ9HCJ6 419 aa17.47■□□□□ 0.39
CLN8-209ENST00000635970 TUBE1Q9UJT0 475 aa17.47■□□□□ 0.39
CLN8-209ENST00000635970 ZBTB43O43298 467 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 STAT3P40763 770 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 CCNA1P78396 465 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 FANCCQ00597 558 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 NCAPG2Q86XI2 1143 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 UBXN4Q92575 508 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 TEX13BQ9BXU2 312 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 TMX1Q9H3N1 280 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 FAM237AA0A1B0GTK4 181 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 EFCAB8A8MWE9 144 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 CYTH3O43739 400 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 PPP6R2O75170 966 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 ERCC6LQ2NKX8 1250 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 COL13A1Q5TAT6 717 aaPredicted RBP17.46■□□□□ 0.39
CLN8-209ENST00000635970 ANO1Q5XXA6 986 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 GPR142Q7Z601 462 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 HOMER1Q86YM7 354 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 MAP3K14Q99558 947 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 JMJD4Q9H9V9 463 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 HOMER2Q9NSB8 354 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 ZNF446Q9NWS9 450 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.46■□□□□ 0.39
CLN8-209ENST00000635970 GABRQQ9UN88 632 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 CLIC4Q9Y696 253 aa17.46■□□□□ 0.39
CLN8-209ENST00000635970 V9GYY5 206 aaPredicted RBP17.46■□□□□ 0.39
CLN8-209ENST00000635970 RBBP6Q7Z6E9 1792 aaKnown RBP17.45■□□□□ 0.38
CLN8-209ENST00000635970 GOLGA8AA7E2F4 631 aa17.45■□□□□ 0.38
CLN8-209ENST00000635970 CALM1P0DP23 149 aa17.45■□□□□ 0.38
CLN8-209ENST00000635970 CALM2P0DP24 149 aa17.45■□□□□ 0.38
CLN8-209ENST00000635970 CALM3P0DP25 149 aa17.45■□□□□ 0.38
CLN8-209ENST00000635970 GUCY1B3Q02153 619 aa17.45■□□□□ 0.38
CLN8-209ENST00000635970 PRKCZQ05513 592 aa17.45■□□□□ 0.38
CLN8-209ENST00000635970 SLC39A14Q15043 492 aa17.45■□□□□ 0.38
CLN8-209ENST00000635970 CDC37Q16543 378 aaPredicted RBP17.45■□□□□ 0.38
CLN8-209ENST00000635970 CTU1Q7Z7A3 348 aaKnown RBP17.45■□□□□ 0.38
CLN8-209ENST00000635970 RIOX2Q8IUF8 465 aa17.45■□□□□ 0.38
CLN8-209ENST00000635970 FANCBQ8NB91 859 aa17.45■□□□□ 0.38
CLN8-209ENST00000635970 HPS5Q9UPZ3 1129 aa17.45■□□□□ 0.38
CLN8-209ENST00000635970 PLXNA1Q9UIW2 1896 aa17.45■□□□□ 0.38
CLN8-209ENST00000635970 ZNF236Q9UL36 1845 aa17.45■□□□□ 0.38
CLN8-209ENST00000635970 ATP2A1O14983 1001 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 MAPK4P31152 587 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 KIF5BP33176 963 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 FOSBP53539 338 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 MYL5Q02045 173 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 TEX35Q5T0J7 233 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 AXDND1Q5T1B0 1012 aaPredicted RBP17.44■□□□□ 0.38
CLN8-209ENST00000635970 TMCO3Q6UWJ1 677 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 CCDC82Q8N4S0 544 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 ORC3Q9UBD5 711 aaPredicted RBP17.44■□□□□ 0.38
CLN8-209ENST00000635970 DNAI1Q9UI46 699 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 FHOD1Q9Y613 1164 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 CPLX1O14810 134 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 FDX1P10109 184 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 CDC27P30260 824 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 METAP2P50579 478 aaKnown RBP eCLIP17.44■□□□□ 0.38
CLN8-209ENST00000635970 CLCN6P51797 869 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 OAZ1P54368 228 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 RTN1Q16799 776 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 ARHGAP29Q52LW3 1261 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 SRBD1Q8N5C6 995 aaKnown RBP17.44■□□□□ 0.38
CLN8-209ENST00000635970 CCPG1Q9ULG6 757 aa17.44■□□□□ 0.38
CLN8-209ENST00000635970 ZRANB2O95218 330 aaKnown RBP eCLIP17.43■□□□□ 0.38
CLN8-209ENST00000635970 ICAM1P05362 532 aa17.43■□□□□ 0.38
CLN8-209ENST00000635970 PFKFB1P16118 471 aa17.43■□□□□ 0.38
CLN8-209ENST00000635970 UBASH3AP57075 661 aa17.43■□□□□ 0.38
CLN8-209ENST00000635970 QRICH1Q2TAL8 776 aa17.43■□□□□ 0.38
CLN8-209ENST00000635970 TMTC3Q6ZXV5 915 aa17.43■□□□□ 0.38
CLN8-209ENST00000635970 PLEKHH3Q7Z736 793 aa17.43■□□□□ 0.38
CLN8-209ENST00000635970 MNS1Q8NEH6 495 aa17.43■□□□□ 0.38
CLN8-209ENST00000635970 SHCBP1Q8NEM2 672 aa17.43■□□□□ 0.38
CLN8-209ENST00000635970 PIGSQ96S52 555 aa17.43■□□□□ 0.38
CLN8-209ENST00000635970 RIOX1Q9H6W3 641 aa17.43■□□□□ 0.38
CLN8-209ENST00000635970 FAM217BQ9NTX9 383 aaPredicted RBP17.43■□□□□ 0.38
CLN8-209ENST00000635970 LCTP09848 1927 aa17.43■□□□□ 0.38
CLN8-209ENST00000635970 ARHGAP6O43182 974 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 CDKL5O76039 1030 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 SLC25A27O95847 323 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 ALAS1P13196 640 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 SYKP43405 635 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 USH1GQ495M9 461 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 COA7Q96BR5 231 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 SRRDQ9UH36 339 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 HPSEQ9Y251 543 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 NID2Q14112 1375 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 A0A087WWV3 80 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 PPP1R11O60927 126 aaPredicted RBP17.42■□□□□ 0.38
CLN8-209ENST00000635970 PNMA6AP0CW24 399 aaPredicted RBP17.42■□□□□ 0.38
CLN8-209ENST00000635970 CYP2C19P33261 490 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 FLT3LGP49771 235 aa17.42■□□□□ 0.38
CLN8-209ENST00000635970 ERCC4Q92889 916 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms