RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 LRRC8DQ7L1W4 858 aa15.09■□□□□ 0.01
LINC00339-206ENST00000634451 ADGRF4Q8IZF3 695 aa15.09■□□□□ 0.01
LINC00339-206ENST00000634451 PHOSPHO2Q8TCD6 241 aa15.09■□□□□ 0.01
LINC00339-206ENST00000634451 RILPL2Q969X0 211 aa15.09■□□□□ 0.01
LINC00339-206ENST00000634451 OSBPL7Q9BZF2 842 aa15.09■□□□□ 0.01
LINC00339-206ENST00000634451 TSPYL2Q9H2G4 693 aaPredicted RBP15.09■□□□□ 0.01
LINC00339-206ENST00000634451 VAT1LQ9HCJ6 419 aa15.09■□□□□ 0.01
LINC00339-206ENST00000634451 BAZ2BQ9UIF8 2168 aaKnown RBP15.09■□□□□ 0.01
LINC00339-206ENST00000634451 ZMYM6O95789 1325 aa15.09■□□□□ 0.01
LINC00339-206ENST00000634451 FAM86C2PA6NEL3 165 aa15.08■□□□□ 0
LINC00339-206ENST00000634451 TRIM6-TRIM34B2RNG4 842 aa15.08■□□□□ 0
LINC00339-206ENST00000634451 B4E1Z4 1266 aa15.08■□□□□ 0
LINC00339-206ENST00000634451 PPP1R11O60927 126 aaPredicted RBP15.08■□□□□ 0
LINC00339-206ENST00000634451 GH1P01241 217 aa15.08■□□□□ 0
LINC00339-206ENST00000634451 CKBP12277 381 aa15.08■□□□□ 0
LINC00339-206ENST00000634451 PTPN11Q06124 597 aaPredicted RBP15.08■□□□□ 0
LINC00339-206ENST00000634451 SLC35G1Q2M3R5 365 aa15.08■□□□□ 0
LINC00339-206ENST00000634451 TRIM71Q2Q1W2 868 aaKnown RBP15.08■□□□□ 0
LINC00339-206ENST00000634451 BRDTQ58F21 947 aaPredicted RBP15.08■□□□□ 0
LINC00339-206ENST00000634451 PNMA1Q8ND90 353 aa15.08■□□□□ 0
LINC00339-206ENST00000634451 IL31RAQ8NI17 732 aa15.08■□□□□ 0
LINC00339-206ENST00000634451 GPKOWQ92917 476 aaPredicted RBP eCLIP15.08■□□□□ 0
LINC00339-206ENST00000634451 IL25Q9H293 177 aa15.08■□□□□ 0
LINC00339-206ENST00000634451 C11orf16Q9NQ32 467 aa15.08■□□□□ 0
LINC00339-206ENST00000634451 KPNA6O60684 536 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 RGS20O76081 388 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 SELPP16109 830 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 PLA2G5P39877 138 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 KCNJ6P48051 423 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 PSEN2P49810 448 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.07■□□□□ 0
LINC00339-206ENST00000634451 SESTD1Q86VW0 696 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 STAG2Q8N3U4 1231 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 ENAHQ8N8S7 591 aaPredicted RBP15.07■□□□□ 0
LINC00339-206ENST00000634451 AFAP1L1Q8TED9 768 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 TTC14Q96N46 770 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 RMDN3Q96TC7 470 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 LRFN3Q9BTN0 628 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 BCAS3Q9H6U6 928 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 JMJD4Q9H9V9 463 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 SUGCTQ9HAC7 445 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 GTF2IRD1Q9UHL9 959 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 DDX41Q9UJV9 622 aaKnown RBP15.07■□□□□ 0
LINC00339-206ENST00000634451 SIP14410 1827 aa15.07■□□□□ 0
LINC00339-206ENST00000634451 LINC01553A4QN01 128 aa15.06■□□□□ 0
LINC00339-206ENST00000634451 BAIAP3O94812 1187 aa15.06■□□□□ 0
LINC00339-206ENST00000634451 SDSP20132 328 aa15.06■□□□□ 0
LINC00339-206ENST00000634451 GPATCH4Q5T3I0 446 aaKnown RBP15.06■□□□□ 0
LINC00339-206ENST00000634451 ZNF618Q5T7W0 954 aa15.06■□□□□ 0
LINC00339-206ENST00000634451 B4GALNT3Q6L9W6 998 aa15.06■□□□□ 0
LINC00339-206ENST00000634451 RGS22Q8NE09 1264 aa15.06■□□□□ 0
LINC00339-206ENST00000634451 CAGE1Q8TC20 777 aa15.06■□□□□ 0
LINC00339-206ENST00000634451 ESR2Q92731 530 aa15.06■□□□□ 0
LINC00339-206ENST00000634451 HLA-CQ95604 372 aa15.06■□□□□ 0
LINC00339-206ENST00000634451 TELO2Q9Y4R8 837 aa15.06■□□□□ 0
LINC00339-206ENST00000634451 ABCB11O95342 1321 aa15.06■□□□□ 0
LINC00339-206ENST00000634451 DOCK5Q9H7D0 1870 aa15.06■□□□□ 0
LINC00339-206ENST00000634451 MICAL3Q7RTP6 2002 aa15.05■□□□□ 0
LINC00339-206ENST00000634451 KIF28PB7ZC32 967 aa15.05■□□□□ -0
LINC00339-206ENST00000634451 DHX16O60231 1041 aaKnown RBP15.05■□□□□ -0
LINC00339-206ENST00000634451 CXCL10P02778 98 aa15.05■□□□□ -0
LINC00339-206ENST00000634451 HOXA13P31271 388 aaPredicted RBP15.05■□□□□ -0
LINC00339-206ENST00000634451 SP2Q02086 613 aa15.05■□□□□ -0
LINC00339-206ENST00000634451 RBL2Q08999 1139 aa15.05■□□□□ -0
LINC00339-206ENST00000634451 HDAC1Q13547 482 aaPredicted RBP15.05■□□□□ -0
LINC00339-206ENST00000634451 MFSD10Q14728 455 aa15.05■□□□□ -0
LINC00339-206ENST00000634451 KIAA0753Q2KHM9 967 aa15.05■□□□□ -0
LINC00339-206ENST00000634451 CNKSR3Q6P9H4 555 aa15.05■□□□□ -0
LINC00339-206ENST00000634451 CWC27Q6UX04 472 aaKnown RBP15.05■□□□□ -0
LINC00339-206ENST00000634451 DGKHQ86XP1 1220 aa15.05■□□□□ -0
LINC00339-206ENST00000634451 NSUN6Q8TEA1 469 aaKnown RBP15.05■□□□□ -0
LINC00339-206ENST00000634451 C17orf80Q9BSJ5 609 aa15.05■□□□□ -0
LINC00339-206ENST00000634451 ZBED2Q9BTP6 218 aa15.05■□□□□ -0
LINC00339-206ENST00000634451 PXMP2Q9NR77 195 aa15.05■□□□□ -0
LINC00339-206ENST00000634451 HAS3O00219 553 aa15.04■□□□□ -0
LINC00339-206ENST00000634451 GJB5O95377 273 aa15.04■□□□□ -0
LINC00339-206ENST00000634451 F2P00734 622 aa15.04■□□□□ -0
LINC00339-206ENST00000634451 CFBP00751 764 aa15.04■□□□□ -0
LINC00339-206ENST00000634451 NR3C2P08235 984 aa15.04■□□□□ -0
LINC00339-206ENST00000634451 STXBP2Q15833 593 aa15.04■□□□□ -0
LINC00339-206ENST00000634451 AAK1Q2M2I8 961 aa15.04■□□□□ -0
LINC00339-206ENST00000634451 ARHGEF16Q5VV41 709 aa15.04■□□□□ -0
LINC00339-206ENST00000634451 FBXO11Q86XK2 927 aa15.04■□□□□ -0
LINC00339-206ENST00000634451 C7orf31Q8N865 590 aa15.04■□□□□ -0
LINC00339-206ENST00000634451 ZSCAN10Q96SZ4 725 aaPredicted RBP15.04■□□□□ -0
LINC00339-206ENST00000634451 MPHOSPH6Q99547 160 aaKnown RBP15.04■□□□□ -0
LINC00339-206ENST00000634451 KAT14Q9H8E8 782 aa15.04■□□□□ -0
LINC00339-206ENST00000634451 ZSWIM5Q9P217 1185 aa15.04■□□□□ -0
LINC00339-206ENST00000634451 ZBTB47Q9UFB7 747 aaPredicted RBP15.04■□□□□ -0
LINC00339-206ENST00000634451 MRVI1Q9Y6F6 885 aa15.04■□□□□ -0
LINC00339-206ENST00000634451 MUC6Q6W4X9 2439 aa15.03■□□□□ -0
LINC00339-206ENST00000634451 ZNF213O14771 459 aa15.03■□□□□ -0
LINC00339-206ENST00000634451 MYCLP12524 364 aaPredicted RBP15.03■□□□□ -0
LINC00339-206ENST00000634451 CASTP20810 708 aaKnown RBP15.03■□□□□ -0
LINC00339-206ENST00000634451 MKRN4PQ13434 485 aaPredicted RBP15.03■□□□□ -0
LINC00339-206ENST00000634451 DGKDQ16760 1214 aa15.03■□□□□ -0
LINC00339-206ENST00000634451 HSDL1Q3SXM5 330 aa15.03■□□□□ -0
LINC00339-206ENST00000634451 PLEKHM2Q8IWE5 1019 aa15.03■□□□□ -0
LINC00339-206ENST00000634451 ANKS1AQ92625 1134 aa15.03■□□□□ -0
LINC00339-206ENST00000634451 FAM122AQ96E09 287 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms