RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 SLC27A2O14975 620 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 SPTLC2O15270 562 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 SLC34A2O95436 690 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 GZMAP12544 262 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 HOXC12P31275 282 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 TNNT3P45378 269 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-213ENST00000630925 NPTX2P47972 431 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 SKOR1P84550 965 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 PDE4BQ07343 736 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 MAP7Q14244 749 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 TAF7Q15545 349 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-213ENST00000630925 WSCD2Q2TBF2 565 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 AMOTQ4VCS5 1084 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 WDR44Q5JSH3 913 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 RRP12Q5JTH9 1297 aaKnown RBP5.51□□□□□ -1.53
SDCBP-213ENST00000630925 LLGL2Q6P1M3 1020 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 CNSTQ6PJW8 725 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 TMTC1Q8IUR5 882 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 CCDC191Q8NCU4 936 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 SLC35G2Q8TBE7 412 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 ANKRD24Q8TF21 1146 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 ANKRD49Q8WVL7 239 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 ASIC4Q96FT7 647 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 CRBNQ96SW2 442 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 KCNK17Q96T54 332 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 TTC1Q99614 292 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 EFCC1Q9HA90 598 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 UBN1Q9NPG3 1134 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 CCDC39Q9UFE4 941 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 LAMP5Q9UJQ1 280 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 CFAP45Q9UL16 551 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 AGTPBP1Q9UPW5 1226 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 RRP7AQ9Y3A4 280 aaKnown RBP5.51□□□□□ -1.53
SDCBP-213ENST00000630925 C2CD2Q9Y426 696 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 KNSTRNQ9Y448 316 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 N6AMT1Q9Y5N5 214 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 ARHGEF12Q9NZN5 1544 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 HOXC11O43248 304 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-213ENST00000630925 IPO7O95373 1038 aaKnown RBP5.51□□□□□ -1.53
SDCBP-213ENST00000630925 HSPA4LO95757 839 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 ZBED1O96006 694 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 ATP1A3P13637 1013 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 KRT13P13646 458 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 STMN1P16949 149 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 PHKA1P46020 1223 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 SCNN1DP51172 638 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 SPARCL1Q14515 664 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 TNIP1Q15025 636 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 HGSNATQ68CP4 663 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 BEND5Q7L4P6 421 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 JAKMIP1Q96N16 626 aaKnown RBP5.51□□□□□ -1.53
SDCBP-213ENST00000630925 FERD3LQ96RJ6 166 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 NUP88Q99567 741 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-213ENST00000630925 TREX2Q9BQ50 279 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-213ENST00000630925 POGKQ9P215 609 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 CFDP1Q9UEE9 299 aaPredicted RBP5.51□□□□□ -1.53
SDCBP-213ENST00000630925 LRCH1Q9Y2L9 728 aa5.51□□□□□ -1.53
SDCBP-213ENST00000630925 AKR1B15C9JRZ8 316 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-213ENST00000630925 CTNND1O60716 968 aaKnown RBP5.5□□□□□ -1.53
SDCBP-213ENST00000630925 EOMESO95936 686 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 MT-CO1P00395 513 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 SLC3A2P08195 630 aaKnown RBP5.5□□□□□ -1.53
SDCBP-213ENST00000630925 KRT9P35527 623 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 CEBPAP49715 358 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-213ENST00000630925 ERVK-21P61565 698 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 TNFAIP2Q03169 654 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 BTKQ06187 659 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 SEMA3AQ14563 771 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 CTC1Q2NKJ3 1217 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 RABL6Q3YEC7 729 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-213ENST00000630925 FBXW10Q5XX13 1052 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 CRTC1Q6UUV9 634 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 BTNL9Q6UXG8 535 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 GALNTL5Q7Z4T8 443 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 COLGALT2Q8IYK4 626 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 ZNF619Q8N2I2 560 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 ZSCAN18Q8TBC5 510 aaPredicted RBP5.5□□□□□ -1.53
SDCBP-213ENST00000630925 TATDN2Q93075 761 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 ZDHHC16Q969W1 377 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 HSPBAP1Q96EW2 488 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 STK31Q9BXU1 1019 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 LRRC3Q9BY71 257 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 IFT22Q9H7X7 185 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 NPHS2Q9NP85 383 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 NMRK2Q9NPI5 230 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 DACT1Q9NYF0 836 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 CDC23Q9UJX2 597 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 PNMA3Q9UL41 463 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 ZNRF3Q9ULT6 936 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 COG5Q9UP83 839 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 KCNH4Q9UQ05 1017 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 JAG2Q9Y219 1238 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 PCDHGA4Q9Y5G9 962 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 KIAA0556O60303 1618 aa5.5□□□□□ -1.53
SDCBP-213ENST00000630925 EIF3FO00303 357 aaPredicted RBP5.49□□□□□ -1.53
SDCBP-213ENST00000630925 KLHL41O60662 606 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 GUCA1CO95843 209 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 CCND1P24385 295 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 CCNCP24863 283 aa5.49□□□□□ -1.53
SDCBP-213ENST00000630925 PPM1AP35813 382 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms