RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 RABGGTBP53611 331 aa19.28■□□□□ 0.68
PDCD6-214ENST00000628729 TROAPQ12815 778 aa19.28■□□□□ 0.68
PDCD6-214ENST00000628729 STXBP2Q15833 593 aa19.28■□□□□ 0.68
PDCD6-214ENST00000628729 IWS1Q96ST2 819 aa19.28■□□□□ 0.68
PDCD6-214ENST00000628729 NKX2-4Q9H2Z4 354 aa19.28■□□□□ 0.68
PDCD6-214ENST00000628729 PRDM12Q9H4Q4 367 aa19.28■□□□□ 0.68
PDCD6-214ENST00000628729 MYH7BA7E2Y1 1941 aa19.27■□□□□ 0.68
PDCD6-214ENST00000628729 B4DLN1 442 aa19.27■□□□□ 0.68
PDCD6-214ENST00000628729 GH1P01241 217 aa19.27■□□□□ 0.68
PDCD6-214ENST00000628729 NR3C2P08235 984 aa19.27■□□□□ 0.68
PDCD6-214ENST00000628729 SUPT20HL2P0C7V6 817 aa19.27■□□□□ 0.68
PDCD6-214ENST00000628729 MYOGP15173 224 aa19.27■□□□□ 0.68
PDCD6-214ENST00000628729 HOXA13P31271 388 aaPredicted RBP19.27■□□□□ 0.68
PDCD6-214ENST00000628729 MRPL12P52815 198 aaKnown RBP19.27■□□□□ 0.68
PDCD6-214ENST00000628729 ADGRE1Q14246 886 aa19.27■□□□□ 0.68
PDCD6-214ENST00000628729 ARHGEF16Q5VV41 709 aa19.27■□□□□ 0.68
PDCD6-214ENST00000628729 DEFB128Q7Z7B8 93 aa19.27■□□□□ 0.68
PDCD6-214ENST00000628729 HOMER1Q86YM7 354 aa19.27■□□□□ 0.68
PDCD6-214ENST00000628729 PIGSQ96S52 555 aa19.27■□□□□ 0.68
PDCD6-214ENST00000628729 PDCD2LQ9BRP1 358 aa19.27■□□□□ 0.68
PDCD6-214ENST00000628729 RIOX1Q9H6W3 641 aa19.27■□□□□ 0.68
PDCD6-214ENST00000628729 DDX41Q9UJV9 622 aaKnown RBP19.27■□□□□ 0.68
PDCD6-214ENST00000628729 IFIT3O14879 490 aaKnown RBP19.26■□□□□ 0.67
PDCD6-214ENST00000628729 KPNA6O60684 536 aa19.26■□□□□ 0.67
PDCD6-214ENST00000628729 RAB30Q15771 203 aa19.26■□□□□ 0.67
PDCD6-214ENST00000628729 BRDTQ58F21 947 aaPredicted RBP19.26■□□□□ 0.67
PDCD6-214ENST00000628729 GDF6Q6KF10 455 aaPredicted RBP19.26■□□□□ 0.67
PDCD6-214ENST00000628729 MB21D2Q8IYB1 491 aaPredicted RBP19.26■□□□□ 0.67
PDCD6-214ENST00000628729 RUFY2Q8WXA3 655 aa19.26■□□□□ 0.67
PDCD6-214ENST00000628729 DHX38Q92620 1227 aaKnown RBP19.26■□□□□ 0.67
PDCD6-214ENST00000628729 PCDHA1Q9Y5I3 950 aa19.26■□□□□ 0.67
PDCD6-214ENST00000628729 U3KPZ7 1027 aaPredicted RBP19.26■□□□□ 0.67
PDCD6-214ENST00000628729 TRIP12Q14669 1992 aaPredicted RBP19.26■□□□□ 0.67
PDCD6-214ENST00000628729 DOCK5Q9H7D0 1870 aa19.25■□□□□ 0.67
PDCD6-214ENST00000628729 PITPNM1O00562 1244 aa19.25■□□□□ 0.67
PDCD6-214ENST00000628729 ZNF286BP0CG31 522 aa19.25■□□□□ 0.67
PDCD6-214ENST00000628729 CHMP4BP1P59074 171 aa19.25■□□□□ 0.67
PDCD6-214ENST00000628729 PTPN11Q06124 597 aaPredicted RBP19.25■□□□□ 0.67
PDCD6-214ENST00000628729 TRDNQ13061 729 aa19.25■□□□□ 0.67
PDCD6-214ENST00000628729 GPKOWQ92917 476 aaPredicted RBP eCLIP19.25■□□□□ 0.67
PDCD6-214ENST00000628729 EMID1Q96A84 441 aaPredicted RBP19.25■□□□□ 0.67
PDCD6-214ENST00000628729 ZFP91Q96JP5 570 aaPredicted RBP19.25■□□□□ 0.67
PDCD6-214ENST00000628729 MTIF3Q9H2K0 278 aaKnown RBP19.25■□□□□ 0.67
PDCD6-214ENST00000628729 PRDM6Q9NQX0 595 aa19.25■□□□□ 0.67
PDCD6-214ENST00000628729 ZBBXA8MT70 800 aa19.24■□□□□ 0.67
PDCD6-214ENST00000628729 EIF3JO75822 258 aaKnown RBP19.24■□□□□ 0.67
PDCD6-214ENST00000628729 PFKMP08237 780 aa19.24■□□□□ 0.67
PDCD6-214ENST00000628729 IQCF3P0C7M6 154 aa19.24■□□□□ 0.67
PDCD6-214ENST00000628729 GPNMBQ14956 572 aa19.24■□□□□ 0.67
PDCD6-214ENST00000628729 WTAPQ15007 396 aa19.24■□□□□ 0.67
PDCD6-214ENST00000628729 PGM5Q15124 567 aa19.24■□□□□ 0.67
PDCD6-214ENST00000628729 SESTD1Q86VW0 696 aa19.24■□□□□ 0.67
PDCD6-214ENST00000628729 RPUSD2Q8IZ73 545 aaKnown RBP19.24■□□□□ 0.67
PDCD6-214ENST00000628729 IGDCC4Q8TDY8 1250 aa19.24■□□□□ 0.67
PDCD6-214ENST00000628729 MAP4K1Q92918 833 aa19.24■□□□□ 0.67
PDCD6-214ENST00000628729 RBM8AQ9Y5S9 174 aaKnown RBP19.24■□□□□ 0.67
PDCD6-214ENST00000628729 MRVI1Q9Y6F6 885 aa19.24■□□□□ 0.67
PDCD6-214ENST00000628729 SLC4A7Q9Y6M7 1214 aa19.24■□□□□ 0.67
PDCD6-214ENST00000628729 TTC28Q96AY4 2481 aa19.23■□□□□ 0.67
PDCD6-214ENST00000628729 SORBS3O60504 671 aa19.23■□□□□ 0.67
PDCD6-214ENST00000628729 F2P00734 622 aa19.23■□□□□ 0.67
PDCD6-214ENST00000628729 HOXD8P13378 290 aaPredicted RBP19.23■□□□□ 0.67
PDCD6-214ENST00000628729 SP2Q02086 613 aa19.23■□□□□ 0.67
PDCD6-214ENST00000628729 PTGISQ16647 500 aa19.23■□□□□ 0.67
PDCD6-214ENST00000628729 RALYLQ86SE5 291 aaKnown RBP19.23■□□□□ 0.67
PDCD6-214ENST00000628729 NCOA7Q8NI08 942 aa19.23■□□□□ 0.67
PDCD6-214ENST00000628729 MYL10Q9BUA6 226 aa19.23■□□□□ 0.67
PDCD6-214ENST00000628729 MSRAQ9UJ68 235 aa19.23■□□□□ 0.67
PDCD6-214ENST00000628729 COL4A4P53420 1690 aaPredicted RBP19.23■□□□□ 0.67
PDCD6-214ENST00000628729 FRMPD4Q14CM0 1322 aa19.23■□□□□ 0.67
PDCD6-214ENST00000628729 HAS3O00219 553 aa19.22■□□□□ 0.67
PDCD6-214ENST00000628729 ARHGEF15O94989 841 aa19.22■□□□□ 0.67
PDCD6-214ENST00000628729 MYCLP12524 364 aaPredicted RBP19.22■□□□□ 0.67
PDCD6-214ENST00000628729 ATP2A2P16615 1042 aaKnown RBP19.22■□□□□ 0.67
PDCD6-214ENST00000628729 UBA1P22314 1058 aaKnown RBP19.22■□□□□ 0.67
PDCD6-214ENST00000628729 HIC1Q14526 733 aa19.22■□□□□ 0.67
PDCD6-214ENST00000628729 TMEM67Q5HYA8 995 aa19.22■□□□□ 0.67
PDCD6-214ENST00000628729 VSIG10LQ86VR7 867 aa19.22■□□□□ 0.67
PDCD6-214ENST00000628729 SKAP1Q86WV1 359 aa19.22■□□□□ 0.67
PDCD6-214ENST00000628729 PPTC7Q8NI37 304 aa19.22■□□□□ 0.67
PDCD6-214ENST00000628729 WNT8BQ93098 351 aa19.22■□□□□ 0.67
PDCD6-214ENST00000628729 BCAS3Q9H6U6 928 aa19.22■□□□□ 0.67
PDCD6-214ENST00000628729 LY9Q9HBG7 655 aa19.22■□□□□ 0.67
PDCD6-214ENST00000628729 GTF2IRD1Q9UHL9 959 aa19.22■□□□□ 0.67
PDCD6-214ENST00000628729 MYO9BQ13459 2157 aa19.21■□□□□ 0.67
PDCD6-214ENST00000628729 DGKDQ16760 1214 aa19.21■□□□□ 0.67
PDCD6-214ENST00000628729 TCTN1Q2MV58 587 aa19.21■□□□□ 0.67
PDCD6-214ENST00000628729 HSDL1Q3SXM5 330 aa19.21■□□□□ 0.67
PDCD6-214ENST00000628729 MYSM1Q5VVJ2 828 aa19.21■□□□□ 0.67
PDCD6-214ENST00000628729 PIBF1Q8WXW3 757 aa19.21■□□□□ 0.67
PDCD6-214ENST00000628729 LSG1Q9H089 658 aaKnown RBP19.21■□□□□ 0.67
PDCD6-214ENST00000628729 SLC28A3Q9HAS3 691 aa19.21■□□□□ 0.67
PDCD6-214ENST00000628729 MAP3K20Q9NYL2 800 aaKnown RBP19.21■□□□□ 0.67
PDCD6-214ENST00000628729 HDAC6Q9UBN7 1215 aa19.21■□□□□ 0.67
PDCD6-214ENST00000628729 PCDHA11Q9Y5I1 949 aa19.21■□□□□ 0.67
PDCD6-214ENST00000628729 PNMA6FA0A0J9YX94 578 aa19.2■□□□□ 0.66
PDCD6-214ENST00000628729 ERICH2A1L162 156 aa19.2■□□□□ 0.66
PDCD6-214ENST00000628729 CASTP20810 708 aaKnown RBP19.2■□□□□ 0.66
PDCD6-214ENST00000628729 RFC2P35250 354 aa19.2■□□□□ 0.66
PDCD6-214ENST00000628729 PSEN2P49810 448 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms