RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 LRRC2Q9BYS8 371 aa19.87■□□□□ 0.77
SPTAN1-214ENST00000628614 DDX41Q9UJV9 622 aaKnown RBP19.87■□□□□ 0.77
SPTAN1-214ENST00000628614 PLEKHA8P1O95397 391 aa19.86■□□□□ 0.77
SPTAN1-214ENST00000628614 MMP3P08254 477 aa19.86■□□□□ 0.77
SPTAN1-214ENST00000628614 CSF2RAP15509 400 aa19.86■□□□□ 0.77
SPTAN1-214ENST00000628614 RXRAP19793 462 aa19.86■□□□□ 0.77
SPTAN1-214ENST00000628614 CYP2C18P33260 490 aa19.86■□□□□ 0.77
SPTAN1-214ENST00000628614 NBPF20Q3BBV1 942 aa19.86■□□□□ 0.77
SPTAN1-214ENST00000628614 NFRKBQ6P4R8 1299 aa19.86■□□□□ 0.77
SPTAN1-214ENST00000628614 SYNE3Q6ZMZ3 975 aa19.86■□□□□ 0.77
SPTAN1-214ENST00000628614 VSIG10LQ86VR7 867 aa19.86■□□□□ 0.77
SPTAN1-214ENST00000628614 FCHSD1Q86WN1 690 aa19.86■□□□□ 0.77
SPTAN1-214ENST00000628614 EMID1Q96A84 441 aaPredicted RBP19.86■□□□□ 0.77
SPTAN1-214ENST00000628614 PTPN11Q06124 597 aaPredicted RBP19.85■□□□□ 0.77
SPTAN1-214ENST00000628614 FAM47CQ5HY64 1035 aa19.85■□□□□ 0.77
SPTAN1-214ENST00000628614 PSRC1Q6PGN9 363 aaPredicted RBP19.85■□□□□ 0.77
SPTAN1-214ENST00000628614 MICU3Q86XE3 530 aa19.85■□□□□ 0.77
SPTAN1-214ENST00000628614 SRBD1Q8N5C6 995 aaKnown RBP19.85■□□□□ 0.77
SPTAN1-214ENST00000628614 FANCBQ8NB91 859 aa19.85■□□□□ 0.77
SPTAN1-214ENST00000628614 CUL5Q93034 780 aa19.85■□□□□ 0.77
SPTAN1-214ENST00000628614 NOC4LQ9BVI4 516 aaKnown RBP19.85■□□□□ 0.77
SPTAN1-214ENST00000628614 MTMR10Q9NXD2 777 aa19.85■□□□□ 0.77
SPTAN1-214ENST00000628614 BAZ2BQ9UIF8 2168 aaKnown RBP19.85■□□□□ 0.77
SPTAN1-214ENST00000628614 KIAA1217Q5T5P2 1943 aa19.84■□□□□ 0.77
SPTAN1-214ENST00000628614 FRMPD4Q14CM0 1322 aa19.84■□□□□ 0.77
SPTAN1-214ENST00000628614 CASTP20810 708 aaKnown RBP19.84■□□□□ 0.77
SPTAN1-214ENST00000628614 LAMC2Q13753 1193 aa19.84■□□□□ 0.77
SPTAN1-214ENST00000628614 DGKDQ16760 1214 aa19.84■□□□□ 0.77
SPTAN1-214ENST00000628614 ZNF697Q5TEC3 545 aa19.84■□□□□ 0.77
SPTAN1-214ENST00000628614 DHX32Q7L7V1 743 aaKnown RBP19.84■□□□□ 0.77
SPTAN1-214ENST00000628614 RASEFQ8IZ41 740 aa19.84■□□□□ 0.77
SPTAN1-214ENST00000628614 IL31RAQ8NI17 732 aa19.84■□□□□ 0.77
SPTAN1-214ENST00000628614 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.84■□□□□ 0.77
SPTAN1-214ENST00000628614 IL23AQ9NPF7 189 aa19.84■□□□□ 0.77
SPTAN1-214ENST00000628614 TRMT13Q9NUP7 481 aaKnown RBP19.84■□□□□ 0.77
SPTAN1-214ENST00000628614 SCN10AQ9Y5Y9 1956 aa19.84■□□□□ 0.77
SPTAN1-214ENST00000628614 STAM2O75886 525 aa19.83■□□□□ 0.77
SPTAN1-214ENST00000628614 RGS20O76081 388 aa19.83■□□□□ 0.77
SPTAN1-214ENST00000628614 HMGB1P09429 215 aaKnown RBP19.83■□□□□ 0.77
SPTAN1-214ENST00000628614 TGFB3P10600 412 aa19.83■□□□□ 0.77
SPTAN1-214ENST00000628614 EXOSC10Q01780 885 aaKnown RBP19.83■□□□□ 0.77
SPTAN1-214ENST00000628614 TMEM240Q5SV17 173 aa19.83■□□□□ 0.77
SPTAN1-214ENST00000628614 APOA5Q6Q788 366 aa19.83■□□□□ 0.77
SPTAN1-214ENST00000628614 TMTC3Q6ZXV5 915 aa19.83■□□□□ 0.77
SPTAN1-214ENST00000628614 RAB11FIP4Q86YS3 637 aa19.83■□□□□ 0.77
SPTAN1-214ENST00000628614 DHX37Q8IY37 1157 aaKnown RBP19.83■□□□□ 0.77
SPTAN1-214ENST00000628614 CMTR1Q8N1G2 835 aaKnown RBP19.83■□□□□ 0.77
SPTAN1-214ENST00000628614 PPTC7Q8NI37 304 aa19.83■□□□□ 0.77
SPTAN1-214ENST00000628614 SMARCC2Q8TAQ2 1214 aa19.83■□□□□ 0.77
SPTAN1-214ENST00000628614 RBM28Q9NW13 759 aaKnown RBP19.83■□□□□ 0.77
SPTAN1-214ENST00000628614 UMODL1Q5DID0 1318 aa19.82■□□□□ 0.76
SPTAN1-214ENST00000628614 PIK3CDO00329 1044 aa19.82■□□□□ 0.76
SPTAN1-214ENST00000628614 ADCK5Q3MIX3 580 aa19.82■□□□□ 0.76
SPTAN1-214ENST00000628614 GNPTABQ3T906 1256 aa19.82■□□□□ 0.76
SPTAN1-214ENST00000628614 C16orf59Q7L2K0 433 aa19.82■□□□□ 0.76
SPTAN1-214ENST00000628614 KATNAL1Q9BW62 490 aa19.82■□□□□ 0.76
SPTAN1-214ENST00000628614 ACRP10323 421 aa19.81■□□□□ 0.76
SPTAN1-214ENST00000628614 CCL23P55773 120 aa19.81■□□□□ 0.76
SPTAN1-214ENST00000628614 CHMP4BP1P59074 171 aa19.81■□□□□ 0.76
SPTAN1-214ENST00000628614 CELF3Q5SZQ8 465 aaKnown RBP19.81■□□□□ 0.76
SPTAN1-214ENST00000628614 WNT8AQ9H1J5 351 aa19.81■□□□□ 0.76
SPTAN1-214ENST00000628614 MTIF3Q9H2K0 278 aaKnown RBP19.81■□□□□ 0.76
SPTAN1-214ENST00000628614 COL6A3P12111 3177 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 MEIS2O14770 477 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 ZBTB43O43298 467 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 GGPS1O95749 300 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 CYP2C9P11712 490 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 HOXD8P13378 290 aaPredicted RBP19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 UBA1P22314 1058 aaKnown RBP19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 MYSM1Q5VVJ2 828 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 USP17L6PQ6QN14 398 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 ZNF365Q70YC5 407 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 SESTD1Q86VW0 696 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 RPUSD2Q8IZ73 545 aaKnown RBP19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 CCDC82Q8N4S0 544 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 KAT2BQ92831 832 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 TCEANC2Q96MN5 208 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 INPP4AQ96PE3 977 aaPredicted RBP19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 PSTPIP2Q9H939 334 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 NOD1Q9Y239 953 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 STXBP5LQ9Y2K9 1186 aa19.8■□□□□ 0.76
SPTAN1-214ENST00000628614 TMEM265A0A087WTH1 108 aa19.79■□□□□ 0.76
SPTAN1-214ENST00000628614 REC8O95072 547 aa19.79■□□□□ 0.76
SPTAN1-214ENST00000628614 RCAN1P53805 252 aa19.79■□□□□ 0.76
SPTAN1-214ENST00000628614 MRPS9P82933 396 aaKnown RBP19.79■□□□□ 0.76
SPTAN1-214ENST00000628614 FGD1P98174 961 aa19.79■□□□□ 0.76
SPTAN1-214ENST00000628614 RTN1Q16799 776 aa19.79■□□□□ 0.76
SPTAN1-214ENST00000628614 RASIP1Q5U651 963 aa19.79■□□□□ 0.76
SPTAN1-214ENST00000628614 PCNX4Q63HM2 1172 aa19.79■□□□□ 0.76
SPTAN1-214ENST00000628614 XRRA1Q6P2D8 792 aa19.79■□□□□ 0.76
SPTAN1-214ENST00000628614 HERVK_113Q902F9 699 aa19.79■□□□□ 0.76
SPTAN1-214ENST00000628614 KCNB2Q92953 911 aa19.79■□□□□ 0.76
SPTAN1-214ENST00000628614 SPATA33Q96N06 139 aa19.79■□□□□ 0.76
SPTAN1-214ENST00000628614 CNTNAP5Q8WYK1 1306 aa19.78■□□□□ 0.76
SPTAN1-214ENST00000628614 PITPNM1O00562 1244 aa19.78■□□□□ 0.76
SPTAN1-214ENST00000628614 PPFIA4O75335 1185 aa19.78■□□□□ 0.76
SPTAN1-214ENST00000628614 F2P00734 622 aa19.78■□□□□ 0.76
SPTAN1-214ENST00000628614 FGBP02675 491 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms