RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 CHURC1Q8WUH1 139 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 TRIB2Q92519 343 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 ESR2Q92731 530 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 USP6NLQ92738 828 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 MMP19Q99542 508 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 HTATIP2Q9BUP3 242 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 INCENPQ9NQS7 918 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 FBXO28Q9NVF7 368 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 MTMR7Q9Y216 660 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.53□□□□□ -1.2
TCF4-249ENST00000625716 PLIN4Q96Q06 1357 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 MGAMO43451 1857 aa7.53□□□□□ -1.2
TCF4-249ENST00000625716 NMT2O60551 498 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 FARP2O94887 1054 aaPredicted RBP7.52□□□□□ -1.21
TCF4-249ENST00000625716 NEFLP07196 543 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 FGRP09769 529 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 TOP1P11387 765 aaKnown RBP7.52□□□□□ -1.21
TCF4-249ENST00000625716 MCCP23508 829 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 ADORA2AP29274 412 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 CNGA1P29973 690 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 NT5C2P49902 561 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 STAT2P52630 851 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 SRSF11Q05519 484 aaKnown RBP7.52□□□□□ -1.21
TCF4-249ENST00000625716 CACNB2Q08289 660 aaPredicted RBP7.52□□□□□ -1.21
TCF4-249ENST00000625716 GRB14Q14449 540 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 CCL14Q16627 93 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 CCDC96Q2M329 555 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 CCDC178Q5BJE1 867 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 FAM160B2Q86V87 743 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 ABRAQ8N0Z2 381 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 CPXCR1Q8N123 301 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 DPF3Q92784 378 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 CHMP4CQ96CF2 233 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 DDX11Q96FC9 970 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 GMCL1Q96IK5 515 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 DSCC1Q9BVC3 393 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 TEX13BQ9BXU2 312 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 PAK6Q9NQU5 681 aaPredicted RBP7.52□□□□□ -1.21
TCF4-249ENST00000625716 ADAMTS5Q9UNA0 930 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 HRH3Q9Y5N1 445 aa7.52□□□□□ -1.21
TCF4-249ENST00000625716 SPATA31C2B4DYI2 1134 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 IL2RAP01589 272 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 THBS1P07996 1170 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 HOXC6P09630 235 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 GSPT1P15170 499 aaKnown RBP7.51□□□□□ -1.21
TCF4-249ENST00000625716 TRDNQ13061 729 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 TPRNQ4KMQ1 711 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 OLFML2BQ68BL8 750 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 SNRNP48Q6IEG0 339 aaKnown RBP7.51□□□□□ -1.21
TCF4-249ENST00000625716 RCSD1Q6JBY9 416 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 KIAA1211Q6ZU35 1233 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 CENPQQ7L2Z9 268 aaPredicted RBP7.51□□□□□ -1.21
TCF4-249ENST00000625716 CYP2U1Q7Z449 544 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 NECAB2Q7Z6G3 386 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 IQCA1Q86XH1 822 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 DCAF4Q8WV16 495 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 STAG1Q8WVM7 1258 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 TTC14Q96N46 770 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 KRT23Q9C075 422 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 CNNM2Q9H8M5 875 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 RAVER2Q9HCJ3 691 aaKnown RBP7.51□□□□□ -1.21
TCF4-249ENST00000625716 IL17RBQ9NRM6 502 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 TCP11L1Q9NUJ3 509 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 FBXO40Q9UH90 709 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 DYRK1BQ9Y463 629 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 RAD50Q92878 1312 aa7.51□□□□□ -1.21
TCF4-249ENST00000625716 ATP2A1O14983 1001 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 MSCO60682 206 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 CELA2BP08218 269 aaPredicted RBP7.5□□□□□ -1.21
TCF4-249ENST00000625716 CHMLP26374 656 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 CCND3P30281 292 aaPredicted RBP7.5□□□□□ -1.21
TCF4-249ENST00000625716 CYP2C19P33261 490 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 OAZ1P54368 228 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 MAP3K21Q5TCX8 1036 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 RIPOR1Q6ZS17 1223 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 KCTD1Q719H9 257 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 TBC1D10CQ8IV04 446 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 ANKRD35Q8N283 1001 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 PHTF2Q8N3S3 785 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 TMEM151AQ8N4L1 468 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 CHST13Q8NET6 341 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 NPLOC4Q8TAT6 608 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 GTPBP3Q969Y2 492 aaKnown RBP7.5□□□□□ -1.21
TCF4-249ENST00000625716 SHISA4Q96DD7 197 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 CCDC136Q96JN2 1154 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 TMEM47Q9BQJ4 181 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 UBAC1Q9BSL1 405 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 KAT14Q9H8E8 782 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 SLC38A10Q9HBR0 1119 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 RAB6BQ9NRW1 208 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 ZNF214Q9UL59 606 aaPredicted RBP7.5□□□□□ -1.21
TCF4-249ENST00000625716 NR2E3Q9Y5X4 410 aa7.5□□□□□ -1.21
TCF4-249ENST00000625716 RBBP6Q7Z6E9 1792 aaKnown RBP7.49□□□□□ -1.21
TCF4-249ENST00000625716 ERICH2A1L162 156 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 PLA2G6O60733 806 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 COBLO75128 1261 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 PGK2P07205 417 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 TKFCQ3LXA3 575 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 CCDC174Q6PII3 467 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 CASC1Q6TDU7 716 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms