RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 ABCB11O95342 1321 aa12.83□□□□□ -0.36
LINC00963-214ENST00000622680 B4E1Z4 1266 aa12.82□□□□□ -0.36
LINC00963-214ENST00000622680 TLL1O43897 1013 aa12.82□□□□□ -0.36
LINC00963-214ENST00000622680 KPNA6O60684 536 aa12.82□□□□□ -0.36
LINC00963-214ENST00000622680 KDM4AO75164 1064 aa12.82□□□□□ -0.36
LINC00963-214ENST00000622680 GH1P01241 217 aa12.82□□□□□ -0.36
LINC00963-214ENST00000622680 ZNF286BP0CG31 522 aa12.82□□□□□ -0.36
LINC00963-214ENST00000622680 KCNJ6P48051 423 aa12.82□□□□□ -0.36
LINC00963-214ENST00000622680 GRB10Q13322 594 aa12.82□□□□□ -0.36
LINC00963-214ENST00000622680 GPNMBQ14956 572 aa12.82□□□□□ -0.36
LINC00963-214ENST00000622680 QRICH1Q2TAL8 776 aa12.82□□□□□ -0.36
LINC00963-214ENST00000622680 ADGRF4Q8IZF3 695 aa12.82□□□□□ -0.36
LINC00963-214ENST00000622680 SYTL5Q8TDW5 730 aaPredicted RBP12.82□□□□□ -0.36
LINC00963-214ENST00000622680 ESR2Q92731 530 aa12.82□□□□□ -0.36
LINC00963-214ENST00000622680 TTC14Q96N46 770 aa12.82□□□□□ -0.36
LINC00963-214ENST00000622680 RNF41Q9H4P4 317 aaPredicted RBP12.82□□□□□ -0.36
LINC00963-214ENST00000622680 PNMA2Q9UL42 364 aa12.82□□□□□ -0.36
LINC00963-214ENST00000622680 B4DLN1 442 aa12.81□□□□□ -0.36
LINC00963-214ENST00000622680 DHX16O60231 1041 aaKnown RBP12.81□□□□□ -0.36
LINC00963-214ENST00000622680 SORBS3O60504 671 aa12.81□□□□□ -0.36
LINC00963-214ENST00000622680 LPXNO60711 386 aa12.81□□□□□ -0.36
LINC00963-214ENST00000622680 BAIAP3O94812 1187 aa12.81□□□□□ -0.36
LINC00963-214ENST00000622680 PCP11498 1178 aaKnown RBP12.81□□□□□ -0.36
LINC00963-214ENST00000622680 EIF2AK2P19525 551 aaKnown RBP12.81□□□□□ -0.36
LINC00963-214ENST00000622680 POU3F3P20264 500 aaPredicted RBP12.81□□□□□ -0.36
LINC00963-214ENST00000622680 MRPL12P52815 198 aaKnown RBP12.81□□□□□ -0.36
LINC00963-214ENST00000622680 AAK1Q2M2I8 961 aa12.81□□□□□ -0.36
LINC00963-214ENST00000622680 LRRC8DQ7L1W4 858 aa12.81□□□□□ -0.36
LINC00963-214ENST00000622680 CCDC155Q8N6L0 562 aa12.81□□□□□ -0.36
LINC00963-214ENST00000622680 CAGE1Q8TC20 777 aa12.81□□□□□ -0.36
LINC00963-214ENST00000622680 PHOSPHO2Q8TCD6 241 aa12.81□□□□□ -0.36
LINC00963-214ENST00000622680 AFAP1L1Q8TED9 768 aa12.81□□□□□ -0.36
LINC00963-214ENST00000622680 WNT8BQ93098 351 aa12.81□□□□□ -0.36
LINC00963-214ENST00000622680 RMDN3Q96TC7 470 aa12.81□□□□□ -0.36
LINC00963-214ENST00000622680 ALG1Q9BT22 464 aa12.81□□□□□ -0.36
LINC00963-214ENST00000622680 MTUS1Q9ULD2 1270 aa12.81□□□□□ -0.36
LINC00963-214ENST00000622680 MYH9P35579 1960 aaKnown RBP12.81□□□□□ -0.36
LINC00963-214ENST00000622680 PLXNA4Q9HCM2 1894 aa12.8□□□□□ -0.36
LINC00963-214ENST00000622680 KIF28PB7ZC32 967 aa12.8□□□□□ -0.36
LINC00963-214ENST00000622680 NBNO60934 754 aa12.8□□□□□ -0.36
LINC00963-214ENST00000622680 SELPP16109 830 aa12.8□□□□□ -0.36
LINC00963-214ENST00000622680 HDAC1Q13547 482 aaPredicted RBP12.8□□□□□ -0.36
LINC00963-214ENST00000622680 B4GALNT3Q6L9W6 998 aa12.8□□□□□ -0.36
LINC00963-214ENST00000622680 SESTD1Q86VW0 696 aa12.8□□□□□ -0.36
LINC00963-214ENST00000622680 ENAHQ8N8S7 591 aaPredicted RBP12.8□□□□□ -0.36
LINC00963-214ENST00000622680 RGS22Q8NE09 1264 aa12.8□□□□□ -0.36
LINC00963-214ENST00000622680 NSUN6Q8TEA1 469 aaKnown RBP12.8□□□□□ -0.36
LINC00963-214ENST00000622680 KAT14Q9H8E8 782 aa12.8□□□□□ -0.36
LINC00963-214ENST00000622680 VAT1LQ9HCJ6 419 aa12.8□□□□□ -0.36
LINC00963-214ENST00000622680 HDAC6Q9UBN7 1215 aa12.8□□□□□ -0.36
LINC00963-214ENST00000622680 GTF2IRD1Q9UHL9 959 aa12.8□□□□□ -0.36
LINC00963-214ENST00000622680 ZNF213O14771 459 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 OPLAHO14841 1288 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 CFBP00751 764 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 CKBP12277 381 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 SDSP20132 328 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 CASTP20810 708 aaKnown RBP12.79□□□□□ -0.36
LINC00963-214ENST00000622680 PSEN2P49810 448 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 MFAP1P55081 439 aaKnown RBP12.79□□□□□ -0.36
LINC00963-214ENST00000622680 ZNF200P98182 395 aaPredicted RBP12.79□□□□□ -0.36
LINC00963-214ENST00000622680 MBTPS1Q14703 1052 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 MFSD10Q14728 455 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 STXBP2Q15833 593 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 ASPRV1Q53RT3 343 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 FAM117BQ6P1L5 589 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 CNKSR3Q6P9H4 555 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 CWC27Q6UX04 472 aaKnown RBP12.79□□□□□ -0.36
LINC00963-214ENST00000622680 IQCA1Q86XH1 822 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 FBXO11Q86XK2 927 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 DGKHQ86XP1 1220 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 ZSCAN10Q96SZ4 725 aaPredicted RBP12.79□□□□□ -0.36
LINC00963-214ENST00000622680 ZBED2Q9BTP6 218 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 JMJD4Q9H9V9 463 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 PXMP2Q9NR77 195 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 DDX41Q9UJV9 622 aaKnown RBP12.79□□□□□ -0.36
LINC00963-214ENST00000622680 MRVI1Q9Y6F6 885 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 TTC3P53804 2025 aa12.79□□□□□ -0.36
LINC00963-214ENST00000622680 ZNF318Q5VUA4 2279 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 PIEZO1Q92508 2521 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 CXCL10P02778 98 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 PARP1P09874 1014 aaKnown RBP12.78□□□□□ -0.36
LINC00963-214ENST00000622680 RBL2Q08999 1139 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 HIC1Q14526 733 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 DGKDQ16760 1214 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 KIAA0753Q2KHM9 967 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 ZNF618Q5T7W0 954 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 ARHGEF16Q5VV41 709 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 STAG2Q8N3U4 1231 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 C7orf31Q8N865 590 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 IL31RAQ8NI17 732 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 HLA-CQ95604 372 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 IWS1Q96ST2 819 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 EPHX3Q9H6B9 360 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 COG5Q9UP83 839 aa12.78□□□□□ -0.36
LINC00963-214ENST00000622680 FNDC1Q4ZHG4 1894 aaPredicted RBP12.78□□□□□ -0.36
LINC00963-214ENST00000622680 PPP1R11O60927 126 aaPredicted RBP12.77□□□□□ -0.37
LINC00963-214ENST00000622680 RGS20O76081 388 aa12.77□□□□□ -0.37
LINC00963-214ENST00000622680 F2P00734 622 aa12.77□□□□□ -0.37
LINC00963-214ENST00000622680 NR3C2P08235 984 aa12.77□□□□□ -0.37
LINC00963-214ENST00000622680 MYCLP12524 364 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms