RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 CCNA1P78396 465 aa16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 SETQ01105 290 aaPredicted RBP16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 CEP55Q53EZ4 464 aa16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 PRR16Q569H4 304 aa16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 NCAPG2Q86XI2 1143 aa16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 ELOA2Q8IYF1 753 aaPredicted RBP16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 ANKRD35Q8N283 1001 aa16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 FAM43AQ8N2R8 423 aa16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 NSUN6Q8TEA1 469 aaKnown RBP16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 HAS1Q92839 578 aa16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 LENG9Q96B70 501 aa16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 EPSTI1Q96J88 318 aa16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 TAAR1Q96RJ0 339 aa16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 TNMDQ9H2S6 317 aa16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 MROH8Q9H579 483 aa16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 TXNRD2Q9NNW7 524 aa16.08■□□□□ 0.16
CLTCL1-212ENST00000622493 IGLV3-22A0A075B6J6 115 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 ERCC3P19447 782 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 TECP42680 631 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 ERVK-9P63128 1117 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 ERVK-24P63145 666 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 Q3C1V9 767 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 ARHGEF16Q5VV41 709 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 NIPA1Q7RTP0 329 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 DNERQ8NFT8 737 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 ETNPPLQ8TBG4 499 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 PTPN18Q99952 460 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 PDCD2LQ9BRP1 358 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 CCSER1Q9C0I3 900 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 TTC12Q9H892 705 aaPredicted RBP16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 PXMP2Q9NR77 195 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 ABT1Q9ULW3 272 aaKnown RBP16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 PCDHA12Q9UN75 941 aa16.07■□□□□ 0.16
CLTCL1-212ENST00000622493 MEIS1O00470 390 aa16.06■□□□□ 0.16
CLTCL1-212ENST00000622493 BCRP11274 1271 aa16.06■□□□□ 0.16
CLTCL1-212ENST00000622493 UBA7P41226 1012 aa16.06■□□□□ 0.16
CLTCL1-212ENST00000622493 PGM5Q15124 567 aa16.06■□□□□ 0.16
CLTCL1-212ENST00000622493 RBM43Q6ZSC3 357 aaKnown RBP16.06■□□□□ 0.16
CLTCL1-212ENST00000622493 USP49Q70CQ1 688 aa16.06■□□□□ 0.16
CLTCL1-212ENST00000622493 GPRC5AQ8NFJ5 357 aa16.06■□□□□ 0.16
CLTCL1-212ENST00000622493 CCDC34Q96HJ3 373 aa16.06■□□□□ 0.16
CLTCL1-212ENST00000622493 MXRA8Q9BRK3 442 aa16.06■□□□□ 0.16
CLTCL1-212ENST00000622493 SDF4Q9BRK5 362 aa16.06■□□□□ 0.16
CLTCL1-212ENST00000622493 MORF4L1Q9UBU8 362 aa16.06■□□□□ 0.16
CLTCL1-212ENST00000622493 USP25Q9UHP3 1055 aa16.06■□□□□ 0.16
CLTCL1-212ENST00000622493 POLR2DO15514 142 aaKnown RBP16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 KANK3Q6NY19 840 aa16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 SYCE3A1L190 88 aa16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 STAM2O75886 525 aa16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 EIF2AK2P19525 551 aaKnown RBP16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 UBXN2AP68543 259 aa16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 CAMK4Q16566 473 aa16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 KRBA2Q6ZNG9 492 aa16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 PLA2G4DQ86XP0 818 aa16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 IQUBQ8NA54 791 aa16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 CYP2W1Q8TAV3 490 aa16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 IWS1Q96ST2 819 aa16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 LRWD1Q9UFC0 647 aa16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 CCDC39Q9UFE4 941 aa16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 HOOK1Q9UJC3 728 aaKnown RBP16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 STK24Q9Y6E0 443 aa16.05■□□□□ 0.16
CLTCL1-212ENST00000622493 FAM155AB1AL88 458 aaPredicted RBP16.04■□□□□ 0.16
CLTCL1-212ENST00000622493 MSH4O15457 936 aa16.04■□□□□ 0.16
CLTCL1-212ENST00000622493 PEX10O60683 326 aa16.04■□□□□ 0.16
CLTCL1-212ENST00000622493 NR3C2P08235 984 aa16.04■□□□□ 0.16
CLTCL1-212ENST00000622493 SREBF2Q12772 1141 aa16.04■□□□□ 0.16
CLTCL1-212ENST00000622493 LONRF3Q496Y0 759 aa16.04■□□□□ 0.16
CLTCL1-212ENST00000622493 LRSAM1Q6UWE0 723 aa16.04■□□□□ 0.16
CLTCL1-212ENST00000622493 VSIG10LQ86VR7 867 aa16.04■□□□□ 0.16
CLTCL1-212ENST00000622493 CNNM3Q8NE01 707 aa16.04■□□□□ 0.16
CLTCL1-212ENST00000622493 JADE2Q9NQC1 790 aa16.04■□□□□ 0.16
CLTCL1-212ENST00000622493 ADD3Q9UEY8 706 aaKnown RBP16.04■□□□□ 0.16
CLTCL1-212ENST00000622493 UBIAD1Q9Y5Z9 338 aa16.04■□□□□ 0.16
CLTCL1-212ENST00000622493 MAFGO15525 162 aa16.03■□□□□ 0.16
CLTCL1-212ENST00000622493 SLC26A4O43511 780 aa16.03■□□□□ 0.16
CLTCL1-212ENST00000622493 YY1P25490 414 aa16.03■□□□□ 0.16
CLTCL1-212ENST00000622493 CCND2P30279 289 aa16.03■□□□□ 0.16
CLTCL1-212ENST00000622493 MRPS9P82933 396 aaKnown RBP16.03■□□□□ 0.16
CLTCL1-212ENST00000622493 FAM110CQ1W6H9 321 aa16.03■□□□□ 0.16
CLTCL1-212ENST00000622493 ANKRD13CQ8N6S4 541 aa16.03■□□□□ 0.16
CLTCL1-212ENST00000622493 B4DLN1 442 aa16.02■□□□□ 0.16
CLTCL1-212ENST00000622493 POTEB2H3BUK9 544 aa16.02■□□□□ 0.16
CLTCL1-212ENST00000622493 SLFN14P0C7P3 912 aa16.02■□□□□ 0.16
CLTCL1-212ENST00000622493 FCER1AP12319 257 aa16.02■□□□□ 0.16
CLTCL1-212ENST00000622493 ITGB5P18084 799 aa16.02■□□□□ 0.16
CLTCL1-212ENST00000622493 CDC25AP30304 524 aa16.02■□□□□ 0.16
CLTCL1-212ENST00000622493 KCTD2Q14681 263 aa16.02■□□□□ 0.16
CLTCL1-212ENST00000622493 KRT79Q5XKE5 535 aa16.02■□□□□ 0.16
CLTCL1-212ENST00000622493 CABP7Q86V35 215 aa16.02■□□□□ 0.16
CLTCL1-212ENST00000622493 IFNL1Q8IU54 200 aa16.02■□□□□ 0.16
CLTCL1-212ENST00000622493 PDILTQ8N807 584 aa16.02■□□□□ 0.16
CLTCL1-212ENST00000622493 IL31RAQ8NI17 732 aa16.02■□□□□ 0.16
CLTCL1-212ENST00000622493 SLC5A5Q92911 643 aa16.02■□□□□ 0.16
CLTCL1-212ENST00000622493 DISC1Q9NRI5 854 aa16.02■□□□□ 0.16
CLTCL1-212ENST00000622493 IGF2BP3O00425 579 aaKnown RBP eCLIP16.02■□□□□ 0.15
CLTCL1-212ENST00000622493 ACTN4O43707 911 aaKnown RBP16.02■□□□□ 0.15
CLTCL1-212ENST00000622493 STRNO43815 780 aa16.02■□□□□ 0.15
CLTCL1-212ENST00000622493 MTMR1Q13613 665 aa16.02■□□□□ 0.15
CLTCL1-212ENST00000622493 CEP57L1Q8IYX8 460 aa16.02■□□□□ 0.15
CLTCL1-212ENST00000622493 FAM133AQ8N9E0 248 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms