RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 ANKRD20A3Q5VUR7 823 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 CYP26C1Q6V0L0 522 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 NAF1Q96HR8 494 aaKnown RBP8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 TMEM87BQ96K49 555 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 RMDN2Q96LZ7 410 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 ZKSCAN3Q9BRR0 538 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 UBA5Q9GZZ9 404 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 TMEM165Q9HC07 324 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 KCNMB3Q9NPA1 279 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 FBXO2Q9UK22 296 aaPredicted RBP8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 CEP131Q9UPN4 1083 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 ITGB4P16144 1822 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 MYH13Q9UKX3 1938 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 COL4A1P02462 1669 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 FAM205CA6NFA0 338 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 TPD52L2O43399 206 aaKnown RBP8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 ZMYND10O75800 440 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 FLOT1O75955 427 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 ATP2A2P16615 1042 aaKnown RBP8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 FGFR2P21802 821 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 POLD1P28340 1107 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 NR5A1Q13285 461 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 TTF1Q15361 905 aaPredicted RBP8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 TAF11Q15544 211 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 USP49Q70CQ1 688 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 NOSTRINQ8IVI9 506 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 DIS3L2Q8IYB7 885 aaKnown RBP8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 IFNL3Q8IZI9 196 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 MAGEB6Q8N7X4 407 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 KRI1Q8N9T8 703 aaKnown RBP8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 OXER1Q8TDS5 423 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 AIDAQ96BJ3 306 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 OPTNQ96CV9 577 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 DMAP1Q9NPF5 467 aaPredicted RBP8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 ZBTB1Q9Y2K1 713 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 L3MBTL1Q9Y468 752 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 NFE2L3Q9Y4A8 694 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 STK36Q9NRP7 1315 aa8.25□□□□□ -1.09
TRIM49B-202ENST00000622138 NUP98P52948 1817 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 CCT8L1PA6NM43 557 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 GSG1L2A8MUP6 293 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 E7ENQ6 273 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 TRIM37O94972 964 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 MMP1P03956 469 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 ZNF24P17028 368 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 GJA8P48165 433 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 SCNN1BP51168 640 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 NLRP5P59047 1200 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 RBL2Q08999 1139 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 TRIM29Q14134 588 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 ALX1Q15699 326 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 ENOX2Q16206 610 aaKnown RBP8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 Q4G0T1 1027 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 KCTD16Q68DU8 428 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 IQCKQ8N0W5 287 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 LCORLQ8N3X6 602 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 CCDC82Q8N4S0 544 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 CNBD1Q8NA66 436 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 MLKLQ8NB16 471 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 JAKMIP2Q96AA8 810 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 PPP1R14BQ96C90 147 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 CTAGE1Q96RT6 745 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 TAF1DQ9H5J8 278 aaPredicted RBP8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 CIDEBQ9UHD4 219 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 SERTAD1Q9UHV2 236 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 PCDHB6Q9Y5E3 794 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 SLC12A7Q9Y666 1083 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 NID2Q14112 1375 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 BCORQ6W2J9 1755 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 A0A087X0B3 334 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 SEMA3EO15041 775 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 E2F6O75461 281 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 BAG3O95817 575 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 ATP1A1P05023 1023 aaKnown RBP8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 EIF4BP23588 611 aaKnown RBP8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 CDC25CP30307 473 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 LIFRP42702 1097 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 SSRP1Q08945 709 aaKnown RBP8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 ITIH4Q14624 930 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 POSTNQ15063 836 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 SFMBT2Q5VUG0 894 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 LRIG3Q6UXM1 1119 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 SYCP3Q8IZU3 236 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 TRIML1Q8N9V2 468 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 SPATA5Q8NB90 893 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 SMCR8Q8TEV9 937 aaPredicted RBP8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 KIFAP3Q92845 792 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 IWS1Q96ST2 819 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 UBE2OQ9C0C9 1292 aaKnown RBP8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 NAPBQ9H115 298 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 VCXQ9H320 206 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 PPANQ9NQ55 473 aaKnown RBP8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 PCMTD2Q9NV79 361 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 STIM2Q9P246 746 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 SWAP70Q9UH65 585 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 SLC12A6Q9UHW9 1150 aa8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 TRMT112Q9UI30 125 aaKnown RBP8.24□□□□□ -1.09
TRIM49B-202ENST00000622138 BCL9O00512 1426 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms