RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 CHST13Q8NET6 341 aa21.02■□□□□ 0.96
SEMA6C-210ENST00000621728 ETNPPLQ8TBG4 499 aa21.02■□□□□ 0.96
SEMA6C-210ENST00000621728 SMCR8Q8TEV9 937 aaPredicted RBP21.02■□□□□ 0.96
SEMA6C-210ENST00000621728 RMDN3Q96TC7 470 aa21.02■□□□□ 0.96
SEMA6C-210ENST00000621728 PXMP2Q9NR77 195 aa21.02■□□□□ 0.96
SEMA6C-210ENST00000621728 ABT1Q9ULW3 272 aaKnown RBP21.02■□□□□ 0.96
SEMA6C-210ENST00000621728 RABGAP1Q9Y3P9 1069 aa21.02■□□□□ 0.96
SEMA6C-210ENST00000621728 POTEMA6NI47 508 aa21.02■□□□□ 0.95
SEMA6C-210ENST00000621728 TTC12Q9H892 705 aaPredicted RBP21.02■□□□□ 0.95
SEMA6C-210ENST00000621728 MAP3K20Q9NYL2 800 aaKnown RBP21.02■□□□□ 0.95
SEMA6C-210ENST00000621728 SERTAD1Q9UHV2 236 aa21.02■□□□□ 0.95
SEMA6C-210ENST00000621728 FRMPD4Q14CM0 1322 aa21.01■□□□□ 0.95
SEMA6C-210ENST00000621728 FOXN1O15353 648 aa21.01■□□□□ 0.95
SEMA6C-210ENST00000621728 MSH4O15457 936 aa21.01■□□□□ 0.95
SEMA6C-210ENST00000621728 MARCH6O60337 910 aa21.01■□□□□ 0.95
SEMA6C-210ENST00000621728 ERVK-9P63128 1117 aa21.01■□□□□ 0.95
SEMA6C-210ENST00000621728 ERVK-24P63145 666 aa21.01■□□□□ 0.95
SEMA6C-210ENST00000621728 MRPS9P82933 396 aaKnown RBP21.01■□□□□ 0.95
SEMA6C-210ENST00000621728 CNTN2Q02246 1040 aa21.01■□□□□ 0.95
SEMA6C-210ENST00000621728 KARSQ15046 597 aaKnown RBP21.01■□□□□ 0.95
SEMA6C-210ENST00000621728 PGM5Q15124 567 aa21.01■□□□□ 0.95
SEMA6C-210ENST00000621728 DHX58Q96C10 678 aa21.01■□□□□ 0.95
SEMA6C-210ENST00000621728 IGF2BP3O00425 579 aaKnown RBP eCLIP21■□□□□ 0.95
SEMA6C-210ENST00000621728 TOMM70O94826 608 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 SLC10A3P09131 477 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 MYCLP12524 364 aaPredicted RBP21■□□□□ 0.95
SEMA6C-210ENST00000621728 CCDC173Q0VFZ6 552 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 ARHGEF16Q5VV41 709 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 ANKRD35Q8N283 1001 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 SAMD3Q8N6K7 520 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 ANKRD13CQ8N6S4 541 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 IGSF22Q8N9C0 903 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 PLIN2Q99541 437 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 PDCD2LQ9BRP1 358 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 SLC45A1Q9Y2W3 748 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 ASTN1O14525 1302 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 FAM155AB1AL88 458 aaPredicted RBP21■□□□□ 0.95
SEMA6C-210ENST00000621728 ARP10275 920 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 ITGB5P18084 799 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 FXR2P51116 673 aaKnown RBP eCLIP21■□□□□ 0.95
SEMA6C-210ENST00000621728 ZRSR1Q15695 479 aaKnown RBP21■□□□□ 0.95
SEMA6C-210ENST00000621728 CEP55Q53EZ4 464 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 KRBA2Q6ZNG9 492 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 PLA2G4DQ86XP0 818 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 GRAMD1CQ8IYS0 662 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 SDF4Q9BRK5 362 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 PORCNQ9H237 461 aa21■□□□□ 0.95
SEMA6C-210ENST00000621728 A0A087WWV3 80 aa20.99■□□□□ 0.95
SEMA6C-210ENST00000621728 TESPA1A2RU30 521 aaPredicted RBP20.99■□□□□ 0.95
SEMA6C-210ENST00000621728 ACTN4O43707 911 aaKnown RBP20.99■□□□□ 0.95
SEMA6C-210ENST00000621728 GRM1Q13255 1194 aa20.99■□□□□ 0.95
SEMA6C-210ENST00000621728 ZIC5Q96T25 663 aa20.99■□□□□ 0.95
SEMA6C-210ENST00000621728 MMTAG2Q9BU76 263 aaKnown RBP20.99■□□□□ 0.95
SEMA6C-210ENST00000621728 TMEM88BA6NKF7 163 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 TMEM266Q2M3C6 531 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 WDR78Q5VTH9 848 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 PCNX4Q63HM2 1172 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 LRSAM1Q6UWE0 723 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 RBM43Q6ZSC3 357 aaKnown RBP20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 CNNM3Q8NE01 707 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 LRRC15Q8TF66 581 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 NUDT12Q9BQG2 462 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 MXRA8Q9BRK3 442 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 WDR11Q9BZH6 1224 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 EFCC1Q9HA90 598 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 LRWD1Q9UFC0 647 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 PCDHA12Q9UN75 941 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 MEIS1O00470 390 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 FSTL1Q12841 308 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 CABP7Q86V35 215 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 PPP1R9BQ96SB3 815 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 PKD2L1Q9P0L9 805 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 FBXO40Q9UH90 709 aa20.98■□□□□ 0.95
SEMA6C-210ENST00000621728 SLC25A27O95847 323 aa20.97■□□□□ 0.95
SEMA6C-210ENST00000621728 UBA7P41226 1012 aa20.97■□□□□ 0.95
SEMA6C-210ENST00000621728 E2F4Q16254 413 aa20.97■□□□□ 0.95
SEMA6C-210ENST00000621728 ZNF784Q8NCA9 323 aaPredicted RBP20.97■□□□□ 0.95
SEMA6C-210ENST00000621728 TIGD1Q96MW7 591 aa20.97■□□□□ 0.95
SEMA6C-210ENST00000621728 UBIAD1Q9Y5Z9 338 aa20.97■□□□□ 0.95
SEMA6C-210ENST00000621728 MANSC4A6NHS7 340 aaPredicted RBP20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 PGK2P07205 417 aa20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 PRR29P0C7W0 189 aa20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 YY1P25490 414 aa20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 PNOCQ13519 176 aa20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 GPRC5AQ8NFJ5 357 aa20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 AK8Q96MA6 479 aa20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 FUCA2Q9BTY2 467 aa20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 CCSER1Q9C0I3 900 aa20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 ZNFX1Q9P2E3 1918 aaKnown RBP20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 LETM1O95202 739 aaPredicted RBP20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 NR3C2P08235 984 aa20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 SPIRE1Q08AE8 756 aa20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 PAXIP1Q6ZW49 1069 aaPredicted RBP20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 SLFN12Q8IYM2 578 aa20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 NSUN6Q8TEA1 469 aaKnown RBP20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 STAMQ92783 540 aa20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 PARK7Q99497 189 aaKnown RBP20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 PFASO15067 1338 aa20.96■□□□□ 0.95
SEMA6C-210ENST00000621728 SOWAHBA6NEL2 793 aa20.95■□□□□ 0.94
SEMA6C-210ENST00000621728 TBX3O15119 743 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms