RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 GNAQP50148 359 aa23.74■■□□□ 1.39
SMC6-210ENST00000621152 RNF20Q5VTR2 975 aa23.74■■□□□ 1.39
SMC6-210ENST00000621152 VSIG10LQ86VR7 867 aa23.74■■□□□ 1.39
SMC6-210ENST00000621152 RRP36Q96EU6 259 aaKnown RBP23.74■■□□□ 1.39
SMC6-210ENST00000621152 CCDC136Q96JN2 1154 aa23.74■■□□□ 1.39
SMC6-210ENST00000621152 LZTS2Q9BRK4 669 aa23.74■■□□□ 1.39
SMC6-210ENST00000621152 LRRC2Q9BYS8 371 aa23.74■■□□□ 1.39
SMC6-210ENST00000621152 SEMA6BQ9H3T3 888 aa23.74■■□□□ 1.39
SMC6-210ENST00000621152 IL23AQ9NPF7 189 aa23.74■■□□□ 1.39
SMC6-210ENST00000621152 CYP2C9P11712 490 aa23.73■■□□□ 1.39
SMC6-210ENST00000621152 LIFRP42702 1097 aa23.73■■□□□ 1.39
SMC6-210ENST00000621152 PGM5Q15124 567 aa23.73■■□□□ 1.39
SMC6-210ENST00000621152 ZFP91Q96JP5 570 aaPredicted RBP23.73■■□□□ 1.39
SMC6-210ENST00000621152 SPZ1Q9BXG8 430 aa23.73■■□□□ 1.39
SMC6-210ENST00000621152 MYH6P13533 1939 aa23.72■■□□□ 1.39
SMC6-210ENST00000621152 FGBP02675 491 aa23.72■■□□□ 1.39
SMC6-210ENST00000621152 MMP3P08254 477 aa23.72■■□□□ 1.39
SMC6-210ENST00000621152 RXRAP19793 462 aa23.72■■□□□ 1.39
SMC6-210ENST00000621152 CASTP20810 708 aaKnown RBP23.72■■□□□ 1.39
SMC6-210ENST00000621152 LAMC2Q13753 1193 aa23.72■■□□□ 1.39
SMC6-210ENST00000621152 NFRKBQ6P4R8 1299 aa23.72■■□□□ 1.39
SMC6-210ENST00000621152 DHX37Q8IY37 1157 aaKnown RBP23.72■■□□□ 1.39
SMC6-210ENST00000621152 CMTR1Q8N1G2 835 aaKnown RBP23.72■■□□□ 1.39
SMC6-210ENST00000621152 SRBD1Q8N5C6 995 aaKnown RBP23.72■■□□□ 1.39
SMC6-210ENST00000621152 SLC12A7Q9Y666 1083 aa23.72■■□□□ 1.39
SMC6-210ENST00000621152 CDC45O75419 566 aa23.71■■□□□ 1.39
SMC6-210ENST00000621152 CALM1P0DP23 149 aa23.71■■□□□ 1.39
SMC6-210ENST00000621152 CALM2P0DP24 149 aa23.71■■□□□ 1.39
SMC6-210ENST00000621152 CALM3P0DP25 149 aa23.71■■□□□ 1.39
SMC6-210ENST00000621152 CCND2P30279 289 aa23.71■■□□□ 1.39
SMC6-210ENST00000621152 PSRC1Q6PGN9 363 aaPredicted RBP23.71■■□□□ 1.39
SMC6-210ENST00000621152 RAB11FIP4Q86YS3 637 aa23.71■■□□□ 1.39
SMC6-210ENST00000621152 SLC17A8Q8NDX2 589 aa23.71■■□□□ 1.39
SMC6-210ENST00000621152 IL31RAQ8NI17 732 aa23.71■■□□□ 1.39
SMC6-210ENST00000621152 GUCD1Q96NT3 240 aa23.71■■□□□ 1.39
SMC6-210ENST00000621152 NEK1Q96PY6 1258 aa23.71■■□□□ 1.39
SMC6-210ENST00000621152 RGS20O76081 388 aa23.7■■□□□ 1.38
SMC6-210ENST00000621152 PLEKHA8P1O95397 391 aa23.7■■□□□ 1.38
SMC6-210ENST00000621152 PTPN11Q06124 597 aaPredicted RBP23.7■■□□□ 1.38
SMC6-210ENST00000621152 DGKDQ16760 1214 aa23.7■■□□□ 1.38
SMC6-210ENST00000621152 KCNV1Q6PIU1 500 aa23.7■■□□□ 1.38
SMC6-210ENST00000621152 RPUSD2Q8IZ73 545 aaKnown RBP23.7■■□□□ 1.38
SMC6-210ENST00000621152 SCLYQ96I15 445 aa23.7■■□□□ 1.38
SMC6-210ENST00000621152 WNT8AQ9H1J5 351 aa23.7■■□□□ 1.38
SMC6-210ENST00000621152 SEC63Q9UGP8 760 aaKnown RBP23.7■■□□□ 1.38
SMC6-210ENST00000621152 BAZ2BQ9UIF8 2168 aaKnown RBP23.69■■□□□ 1.38
SMC6-210ENST00000621152 SYNE3Q6ZMZ3 975 aa23.69■■□□□ 1.38
SMC6-210ENST00000621152 CCDC82Q8N4S0 544 aa23.69■■□□□ 1.38
SMC6-210ENST00000621152 FANCBQ8NB91 859 aa23.69■■□□□ 1.38
SMC6-210ENST00000621152 EMID1Q96A84 441 aaPredicted RBP23.69■■□□□ 1.38
SMC6-210ENST00000621152 GRXCR1A8MXD5 290 aa23.68■■□□□ 1.38
SMC6-210ENST00000621152 SORBS3O60504 671 aa23.68■■□□□ 1.38
SMC6-210ENST00000621152 RASIP1Q5U651 963 aa23.68■■□□□ 1.38
SMC6-210ENST00000621152 RASEFQ8IZ41 740 aa23.68■■□□□ 1.38
SMC6-210ENST00000621152 SMARCC2Q8TAQ2 1214 aa23.68■■□□□ 1.38
SMC6-210ENST00000621152 HERVK_113Q902F9 699 aa23.68■■□□□ 1.38
SMC6-210ENST00000621152 KAT2BQ92831 832 aa23.68■■□□□ 1.38
SMC6-210ENST00000621152 CUL5Q93034 780 aa23.68■■□□□ 1.38
SMC6-210ENST00000621152 CDX2Q99626 313 aaPredicted RBP23.68■■□□□ 1.38
SMC6-210ENST00000621152 TTYH1Q9H313 450 aaPredicted RBP23.68■■□□□ 1.38
SMC6-210ENST00000621152 TGFB3P10600 412 aa23.67■■□□□ 1.38
SMC6-210ENST00000621152 EXOSC10Q01780 885 aaKnown RBP23.67■■□□□ 1.38
SMC6-210ENST00000621152 SP2Q02086 613 aa23.67■■□□□ 1.38
SMC6-210ENST00000621152 CELF3Q5SZQ8 465 aaKnown RBP23.67■■□□□ 1.38
SMC6-210ENST00000621152 MYSM1Q5VVJ2 828 aa23.67■■□□□ 1.38
SMC6-210ENST00000621152 USP17L6PQ6QN14 398 aa23.67■■□□□ 1.38
SMC6-210ENST00000621152 OTOP2Q7RTS6 562 aa23.67■■□□□ 1.38
SMC6-210ENST00000621152 SGMS1Q86VZ5 419 aa23.67■■□□□ 1.38
SMC6-210ENST00000621152 RETREG2Q8NC44 543 aa23.67■■□□□ 1.38
SMC6-210ENST00000621152 RTEL1Q9NZ71 1219 aa23.67■■□□□ 1.38
SMC6-210ENST00000621152 NOD1Q9Y239 953 aa23.67■■□□□ 1.38
SMC6-210ENST00000621152 PPFIA4O75335 1185 aa23.66■■□□□ 1.38
SMC6-210ENST00000621152 PTGISQ16647 500 aa23.66■■□□□ 1.38
SMC6-210ENST00000621152 TSGA10IPQ3SY00 556 aa23.66■■□□□ 1.38
SMC6-210ENST00000621152 DHX32Q7L7V1 743 aaKnown RBP23.66■■□□□ 1.38
SMC6-210ENST00000621152 PPTC7Q8NI37 304 aa23.66■■□□□ 1.38
SMC6-210ENST00000621152 GPKOWQ92917 476 aaPredicted RBP eCLIP23.66■■□□□ 1.38
SMC6-210ENST00000621152 SPATA33Q96N06 139 aa23.66■■□□□ 1.38
SMC6-210ENST00000621152 ALG1Q9BT22 464 aa23.66■■□□□ 1.38
SMC6-210ENST00000621152 MTIF3Q9H2K0 278 aaKnown RBP23.66■■□□□ 1.38
SMC6-210ENST00000621152 MLXIPQ9HAP2 919 aa23.66■■□□□ 1.38
SMC6-210ENST00000621152 CXXC1Q9P0U4 656 aaPredicted RBP23.66■■□□□ 1.38
SMC6-210ENST00000621152 hCG_1642624A0A1W2PR95 340 aa23.65■■□□□ 1.38
SMC6-210ENST00000621152 GGPS1O95749 300 aa23.65■■□□□ 1.38
SMC6-210ENST00000621152 DNAJB2P25686 324 aa23.65■■□□□ 1.38
SMC6-210ENST00000621152 PSEN2P49810 448 aa23.65■■□□□ 1.38
SMC6-210ENST00000621152 MRPS9P82933 396 aaKnown RBP23.65■■□□□ 1.38
SMC6-210ENST00000621152 ADCK5Q3MIX3 580 aa23.65■■□□□ 1.38
SMC6-210ENST00000621152 MICU3Q86XE3 530 aa23.65■■□□□ 1.38
SMC6-210ENST00000621152 TCEANC2Q96MN5 208 aa23.65■■□□□ 1.38
SMC6-210ENST00000621152 MEIS2O14770 477 aa23.64■■□□□ 1.37
SMC6-210ENST00000621152 BFSP2Q13515 415 aa23.64■■□□□ 1.37
SMC6-210ENST00000621152 HSDL1Q3SXM5 330 aa23.64■■□□□ 1.37
SMC6-210ENST00000621152 GDF6Q6KF10 455 aaPredicted RBP23.64■■□□□ 1.37
SMC6-210ENST00000621152 DEFB128Q7Z7B8 93 aa23.64■■□□□ 1.37
SMC6-210ENST00000621152 C7orf31Q8N865 590 aa23.64■■□□□ 1.37
SMC6-210ENST00000621152 VWCEQ96DN2 955 aa23.64■■□□□ 1.37
SMC6-210ENST00000621152 PSTPIP2Q9H939 334 aa23.64■■□□□ 1.37
SMC6-210ENST00000621152 HDAC6Q9UBN7 1215 aa23.64■■□□□ 1.37
SMC6-210ENST00000621152 PIK3CDO00329 1044 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms