RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 COPB1P53618 953 aaKnown RBP9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 TXNRD1Q16881 649 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 INTS5Q6P9B9 1019 aaKnown RBP9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 FBXO11Q86XK2 927 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 FAM53CQ9NYF3 392 aa9.13□□□□□ -0.95
PTPDC1-204ENST00000620992 CTAGE15A4D2H0 777 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 TRIM49BA6NDI0 452 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 CETN3O15182 167 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 CTAGE8P0CG41 777 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 RCAN1P53805 252 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 OSTNP61366 133 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 AOC3Q16853 763 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 WDR44Q5JSH3 913 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 CTAGE6Q86UF2 777 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 CTAGE4Q8IX94 777 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 SPATA20Q8TB22 786 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 RIOK1Q9BRS2 568 aaKnown RBP9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 RNF181Q9P0P0 153 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 MEIS1O00470 390 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 SPOPO43791 374 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 CAMTA2O94983 1202 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 RPL13P26373 211 aaKnown RBP9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 UAP1Q16222 522 aaPredicted RBP9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 DCAF15Q66K64 600 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 PPP1R21Q6ZMI0 780 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 CABP7Q86V35 215 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 TMTC1Q8IUR5 882 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 CCDC63Q8NA47 563 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 CCDC114Q96M63 670 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 NAPGQ99747 312 aaPredicted RBP9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 MTA3Q9BTC8 594 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 SPC25Q9HBM1 224 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 ZBTB12Q9Y330 459 aaPredicted RBP9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 NTSR2O95665 410 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 RPN1P04843 607 aaKnown RBP9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 ATP2C1P98194 919 aaPredicted RBP9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 PABPC4Q13310 644 aaKnown RBP eCLIP9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 CCDC122Q5T0U0 273 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 TBC1D9BQ66K14 1250 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 CC2D2BQ6DHV5 1058 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 CYP26C1Q6V0L0 522 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 RSRC2Q7L4I2 434 aaKnown RBP9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 MIER3Q7Z3K6 550 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 ZNF653Q96CK0 615 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 RABEP2Q9H5N1 569 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 ANKFY1Q9P2R3 1169 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 MYO1AQ9UBC5 1043 aa9.12□□□□□ -0.95
PTPDC1-204ENST00000620992 PP2D1A8MPX8 630 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 ENC1O14682 589 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 ZBTB22O15209 634 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 EIF2AK2P19525 551 aaKnown RBP9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 ABCB4P21439 1286 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 KLRK1P26718 216 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 MARK3P27448 753 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 CDKAL1Q5VV42 579 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 HAUS3Q68CZ6 603 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 C3orf67Q6ZVT6 689 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 ANKRD13CQ8N6S4 541 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 GDAP1L1Q96MZ0 367 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 MMS19Q96T76 1030 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 ABHD10Q9NUJ1 306 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 VPS18Q9P253 973 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 A0A1W2PRG0 241 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 VGLL3A8MV65 326 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 GTPBP6O43824 516 aaPredicted RBP9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 DDAH1O94760 285 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 CCDC172P0C7W6 258 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 CYP2C19P33261 490 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 MECOMQ03112 1051 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 APTXQ7Z2E3 356 aaKnown RBP9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 TAOK3Q9H2K8 898 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 SLC39A2Q9NP94 309 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 MYH2Q9UKX2 1941 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 CNTNAP5Q8WYK1 1306 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 GH2P01242 217 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 EPB41P11171 864 aaKnown RBP9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 PRCPP42785 496 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 HNRNPH2P55795 449 aaKnown RBP9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 FUT2Q10981 343 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 NFX1Q12986 1120 aaKnown RBP9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 ITPK1Q13572 414 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 KCTD2Q14681 263 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 FAM84BQ96KN1 310 aaPredicted RBP9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 CHP1Q99653 195 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 PDE11AQ9HCR9 933 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 CCDC151A5D8V7 595 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 BBOX1O75936 387 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 ERVK-24P63145 666 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 TCP11X2Q5H9J9 407 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 CIAPIN1Q6FI81 312 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 RASGRP2Q7LDG7 609 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 SH3RF1Q7Z6J0 888 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 BBXQ8WY36 941 aaPredicted RBP9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 BRIP1Q9BX63 1249 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 ARPP21Q9UBL0 812 aaPredicted RBP9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 TRIM10Q9UDY6 481 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 ANAPC4Q9UJX5 808 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 MINPP1Q9UNW1 487 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 TFR2Q9UP52 801 aa9.11□□□□□ -0.95
PTPDC1-204ENST00000620992 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms