RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 E7EWF7 191 aa18.61■□□□□ 0.57
CD40-207ENST00000620709 FGBP02675 491 aa18.61■□□□□ 0.57
CD40-207ENST00000620709 SART3Q15020 963 aaKnown RBP18.61■□□□□ 0.57
CD40-207ENST00000620709 LY6KQ17RY6 165 aa18.61■□□□□ 0.57
CD40-207ENST00000620709 NCOA7Q8NI08 942 aa18.61■□□□□ 0.57
CD40-207ENST00000620709 PIBF1Q8WXW3 757 aa18.61■□□□□ 0.57
CD40-207ENST00000620709 SCLYQ96I15 445 aa18.61■□□□□ 0.57
CD40-207ENST00000620709 SENP2Q9HC62 589 aa18.61■□□□□ 0.57
CD40-207ENST00000620709 UNC80Q8N2C7 3258 aa18.61■□□□□ 0.57
CD40-207ENST00000620709 EYSQ5T1H1 3165 aa18.6■□□□□ 0.57
CD40-207ENST00000620709 FOSL2P15408 326 aa18.6■□□□□ 0.57
CD40-207ENST00000620709 BLOC1S2Q6QNY1 142 aa18.6■□□□□ 0.57
CD40-207ENST00000620709 RUFY3Q7L099 469 aa18.6■□□□□ 0.57
CD40-207ENST00000620709 OTOP2Q7RTS6 562 aa18.6■□□□□ 0.57
CD40-207ENST00000620709 TIFAQ96CG3 184 aa18.6■□□□□ 0.57
CD40-207ENST00000620709 IWS1Q96ST2 819 aa18.6■□□□□ 0.57
CD40-207ENST00000620709 WNT8AQ9H1J5 351 aa18.6■□□□□ 0.57
CD40-207ENST00000620709 PCDHA1Q9Y5I3 950 aa18.6■□□□□ 0.57
CD40-207ENST00000620709 CDH23Q9H251 3354 aa18.6■□□□□ 0.57
CD40-207ENST00000620709 ZBTB5O15062 677 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 KPNA6O60684 536 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 GH1P01241 217 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 SUPT20HL2P0C7V6 817 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 MYCLP12524 364 aaPredicted RBP18.59■□□□□ 0.57
CD40-207ENST00000620709 PBX2P40425 430 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 GRM4Q14833 912 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 TMEM67Q5HYA8 995 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 MAFAQ8NHW3 353 aaPredicted RBP18.59■□□□□ 0.57
CD40-207ENST00000620709 AFG1LQ8WV93 481 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 PIGSQ96S52 555 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 MTIF3Q9H2K0 278 aaKnown RBP18.59■□□□□ 0.57
CD40-207ENST00000620709 PXMP2Q9NR77 195 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 NOD1Q9Y239 953 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 PALM3A6NDB9 673 aaPredicted RBP18.59■□□□□ 0.57
CD40-207ENST00000620709 A6NJR5 290 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 ZBBXA8MT70 800 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 PPP1R11O60927 126 aaPredicted RBP18.59■□□□□ 0.57
CD40-207ENST00000620709 HMGB1P09429 215 aaKnown RBP18.59■□□□□ 0.57
CD40-207ENST00000620709 HOXA13P31271 388 aaPredicted RBP18.59■□□□□ 0.57
CD40-207ENST00000620709 STOX1Q6ZVD7 989 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 RPUSD2Q8IZ73 545 aaKnown RBP18.59■□□□□ 0.57
CD40-207ENST00000620709 NEK1Q96PY6 1258 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 MAF1Q9H063 256 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 PDRG1Q9NUG6 133 aa18.59■□□□□ 0.57
CD40-207ENST00000620709 SORBS3O60504 671 aa18.58■□□□□ 0.56
CD40-207ENST00000620709 HSP90AA1P07900 732 aaKnown RBP18.58■□□□□ 0.56
CD40-207ENST00000620709 NR3C2P08235 984 aa18.58■□□□□ 0.56
CD40-207ENST00000620709 GRIN2CQ14957 1233 aa18.58■□□□□ 0.56
CD40-207ENST00000620709 CCDC62Q6P9F0 684 aa18.58■□□□□ 0.56
CD40-207ENST00000620709 DEFB128Q7Z7B8 93 aa18.58■□□□□ 0.56
CD40-207ENST00000620709 CATIPQ7Z7H3 387 aa18.58■□□□□ 0.56
CD40-207ENST00000620709 HERVK_113Q902F9 699 aa18.58■□□□□ 0.56
CD40-207ENST00000620709 PBX4Q9BYU1 374 aa18.58■□□□□ 0.56
CD40-207ENST00000620709 ZNF576Q9H609 170 aa18.58■□□□□ 0.56
CD40-207ENST00000620709 CXXC1Q9P0U4 656 aaPredicted RBP18.58■□□□□ 0.56
CD40-207ENST00000620709 MRVI1Q9Y6F6 885 aa18.58■□□□□ 0.56
CD40-207ENST00000620709 BAZ2BQ9UIF8 2168 aaKnown RBP18.58■□□□□ 0.56
CD40-207ENST00000620709 TMEM265A0A087WTH1 108 aa18.57■□□□□ 0.56
CD40-207ENST00000620709 EIF3JO75822 258 aaKnown RBP18.57■□□□□ 0.56
CD40-207ENST00000620709 CPA1P15085 419 aa18.57■□□□□ 0.56
CD40-207ENST00000620709 RPS6KB1P23443 525 aa18.57■□□□□ 0.56
CD40-207ENST00000620709 FCHSD1Q86WN1 690 aa18.57■□□□□ 0.56
CD40-207ENST00000620709 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.57■□□□□ 0.56
CD40-207ENST00000620709 MSRAQ9UJ68 235 aa18.57■□□□□ 0.56
CD40-207ENST00000620709 KIAA1217Q5T5P2 1943 aa18.57■□□□□ 0.56
CD40-207ENST00000620709 OPLAHO14841 1288 aa18.56■□□□□ 0.56
CD40-207ENST00000620709 MMP3P08254 477 aa18.56■□□□□ 0.56
CD40-207ENST00000620709 HSD17B4P51659 736 aa18.56■□□□□ 0.56
CD40-207ENST00000620709 AK2P54819 239 aa18.56■□□□□ 0.56
CD40-207ENST00000620709 ARHGAP1Q07960 439 aa18.56■□□□□ 0.56
CD40-207ENST00000620709 RASIP1Q5U651 963 aa18.56■□□□□ 0.56
CD40-207ENST00000620709 NFRKBQ6P4R8 1299 aa18.56■□□□□ 0.56
CD40-207ENST00000620709 RETREG2Q8NC44 543 aa18.56■□□□□ 0.56
CD40-207ENST00000620709 MTMR8Q96EF0 704 aa18.56■□□□□ 0.56
CD40-207ENST00000620709 ZFP91Q96JP5 570 aaPredicted RBP18.56■□□□□ 0.56
CD40-207ENST00000620709 GCOM1H8Y6P7 765 aaPredicted RBP18.55■□□□□ 0.56
CD40-207ENST00000620709 POLR2MP0CAP2 368 aa18.55■□□□□ 0.56
CD40-207ENST00000620709 SLC35G1Q2M3R5 365 aa18.55■□□□□ 0.56
CD40-207ENST00000620709 NFXL1Q6ZNB6 911 aa18.55■□□□□ 0.56
CD40-207ENST00000620709 DHX37Q8IY37 1157 aaKnown RBP18.55■□□□□ 0.56
CD40-207ENST00000620709 SLC4A7Q9Y6M7 1214 aa18.55■□□□□ 0.56
CD40-207ENST00000620709 SCN10AQ9Y5Y9 1956 aa18.55■□□□□ 0.56
CD40-207ENST00000620709 ANTXR2P58335 489 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 TRAF1Q13077 416 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 ANKRD1Q15327 319 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 PTGISQ16647 500 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 MB21D2Q8IYB1 491 aaPredicted RBP18.54■□□□□ 0.56
CD40-207ENST00000620709 SPRYD3Q8NCJ5 442 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 TMX3Q96JJ7 454 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 PDCD2LQ9BRP1 358 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 ALG1Q9BT22 464 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 MYL10Q9BUA6 226 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 FTOQ9C0B1 505 aaKnown RBP eCLIP18.54■□□□□ 0.56
CD40-207ENST00000620709 SLKQ9H2G2 1235 aaPredicted RBP18.54■□□□□ 0.56
CD40-207ENST00000620709 NKX2-4Q9H2Z4 354 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 RIOX1Q9H6W3 641 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 DDX41Q9UJV9 622 aaKnown RBP18.54■□□□□ 0.56
CD40-207ENST00000620709 PRUNE2Q8WUY3 3088 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 PNMA6FA0A0J9YX94 578 aa18.54■□□□□ 0.56
CD40-207ENST00000620709 PRC1O43663 620 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms