RNA–Protein interactions for RNA: ENST00000620149.1

SPTSSB-205, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 BASIC

Gene SPTSSB, Length 231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-205ENST00000620149 ADAM9Q13443 819 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 TAF7LQ5H9L4 462 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 TMEM201Q5SNT2 666 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 RNF187Q5TA31 235 aaPredicted RBP2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 ALG1LQ6GMV1 187 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 TTBK2Q6IQ55 1244 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 TMC7Q7Z402 723 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 FBXO33Q7Z6M2 555 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 FUKQ8N0W3 1084 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 TTLL6Q8N841 843 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 ZCCHC14Q8WYQ9 949 aaKnown RBP2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 MRFAP1L1Q96HT8 127 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 CCDC136Q96JN2 1154 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 FAM161BQ96MY7 647 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 CITED4Q96RK1 184 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 KIF2CQ99661 725 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 DUSP9Q99956 384 aaKnown RBP2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 TGIF2Q9GZN2 237 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 PDGFDQ9GZP0 370 aaPredicted RBP2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 SLKQ9H2G2 1235 aaPredicted RBP2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 ZSWIM4Q9H7M6 989 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 PARP2Q9UGN5 583 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 SPG7Q9UQ90 795 aa2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.1□□□□□ -2.07
SPTSSB-205ENST00000620149 PNMA6FA0A0J9YX94 578 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 PPP1R12AO14974 1030 aaPredicted RBP2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 UBOX5O94941 541 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 SSBP05455 408 aaKnown RBP eCLIP2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 VAV1P15498 845 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 HOXB6P17509 224 aaKnown RBP2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 ENDOUP21128 410 aaKnown RBP2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 EIF4BP23588 611 aaKnown RBP2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 ACRV1P26436 265 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 ARHGAP4P98171 946 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 SCRN1Q12765 414 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 PRAMEF18Q5VWM3 479 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 DIEXFQ68CQ4 756 aaKnown RBP2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 HS2ST1Q7LGA3 356 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 CKAP2LQ8IYA6 745 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 ZNF654Q8IZM8 581 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 ZCRB1Q8TBF4 217 aaKnown RBP2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 CCDC74BQ96LY2 380 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 LRRC37BQ96QE4 947 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 PSMD1Q99460 953 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 RBCK1Q9BYM8 510 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 METTL5Q9NRN9 209 aaKnown RBP2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 CHST7Q9NS84 486 aa2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.09□□□□□ -2.07
SPTSSB-205ENST00000620149 KRTAP9-6A8MVA2 160 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 KRT10P13645 584 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 MLLT6P55198 1093 aaPredicted RBP2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 CORO7P57737 925 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 BMS1Q14692 1282 aaKnown RBP2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 NFE2L2Q16236 605 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 CCDC144BQ3MJ40 725 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 NBPF12Q5TAG4 269 aaPredicted RBP2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 HLA-DQA1Q5Y7H0 255 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 LAIR1Q6GTX8 287 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 TMC4Q7Z404 712 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 USP48Q86UV5 1035 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 ADGRG3Q86Y34 549 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 JAMLQ86YT9 394 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 CPLX3Q8WVH0 158 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 ZSWIM3Q96MP5 696 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 FRMD6Q96NE9 622 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 TRIM55Q9BYV6 548 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 OSBPL7Q9BZF2 842 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 TMEM168Q9H0V1 697 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 ACBD3Q9H3P7 528 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 PRDM13Q9H4Q3 707 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 KLHL3Q9UH77 587 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 GGT7Q9UJ14 662 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 SIT1Q9Y3P8 196 aa2.08□□□□□ -2.08
SPTSSB-205ENST00000620149 TLDC2A0PJX2 215 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 SERINC4A6NH21 518 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 TREHO43280 583 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 MARCH6O60337 910 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 LMNB1P20700 586 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 GNA15P30679 374 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 CHMP4BP1P59074 171 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 KRTAP10-5P60370 271 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 RNF4P78317 190 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 RPL6Q02878 288 aaKnown RBP2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 FMR1Q06787 632 aaKnown RBP eCLIP2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 MRPL58Q14197 206 aaKnown RBP2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 SLC9A5Q14940 896 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 SDE2Q6IQ49 451 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 GIMAP6Q6P9H5 292 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 KLHL36Q8N4N3 616 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 NAT16Q8N8M0 369 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 SLC43A3Q8NBI5 491 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 SCARB1Q8WTV0 552 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 ALKBH8Q96BT7 664 aaKnown RBP2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 ARMC5Q96C12 935 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 LMF1Q96S06 567 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 OSBPL2Q9H1P3 480 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 SEC61A2Q9H9S3 476 aa2.07□□□□□ -2.08
SPTSSB-205ENST00000620149 GFOD1Q9NXC2 390 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms