RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 PRR31Q5SQ13 230 aa5.17□□□□□ -1.58
TARDBP-220ENST00000618606 C9orf131Q5VYM1 1079 aa5.17□□□□□ -1.58
TARDBP-220ENST00000618606 TXNDC5Q8NBS9 432 aaKnown RBP5.17□□□□□ -1.58
TARDBP-220ENST00000618606 DNERQ8NFT8 737 aa5.17□□□□□ -1.58
TARDBP-220ENST00000618606 LCORQ96JN0 433 aaPredicted RBP5.17□□□□□ -1.58
TARDBP-220ENST00000618606 GULP1Q9UBP9 304 aa5.17□□□□□ -1.58
TARDBP-220ENST00000618606 NPHP3-ACAD11A0A0J9YXS1 232 aa5.16□□□□□ -1.58
TARDBP-220ENST00000618606 C9orf118A6NHY6 69 aa5.16□□□□□ -1.58
TARDBP-220ENST00000618606 RBM10P98175 930 aaKnown RBP5.16□□□□□ -1.58
TARDBP-220ENST00000618606 TTLL6Q8N841 843 aa5.16□□□□□ -1.58
TARDBP-220ENST00000618606 PLEKHO2Q8TD55 490 aa5.16□□□□□ -1.58
TARDBP-220ENST00000618606 COPS5Q92905 334 aa5.16□□□□□ -1.58
TARDBP-220ENST00000618606 SHDQ96IW2 340 aa5.16□□□□□ -1.58
TARDBP-220ENST00000618606 NPHS1O60500 1241 aa5.15□□□□□ -1.59
TARDBP-220ENST00000618606 B4GALT3O60512 393 aa5.15□□□□□ -1.59
TARDBP-220ENST00000618606 RECKO95980 971 aa5.15□□□□□ -1.59
TARDBP-220ENST00000618606 KLF10Q13118 480 aa5.15□□□□□ -1.59
TARDBP-220ENST00000618606 TMCO4Q5TGY1 634 aa5.15□□□□□ -1.59
TARDBP-220ENST00000618606 WWC2Q6AWC2 1192 aa5.15□□□□□ -1.59
TARDBP-220ENST00000618606 PLEKHH3Q7Z736 793 aa5.15□□□□□ -1.59
TARDBP-220ENST00000618606 GPRASP2Q96D09 838 aa5.15□□□□□ -1.59
TARDBP-220ENST00000618606 MMP19Q99542 508 aa5.15□□□□□ -1.59
TARDBP-220ENST00000618606 HS3ST3A1Q9Y663 406 aa5.15□□□□□ -1.59
TARDBP-220ENST00000618606 ANKRD34BA5PLL1 514 aa5.14□□□□□ -1.59
TARDBP-220ENST00000618606 DDX3XO00571 662 aaKnown RBP eCLIP5.14□□□□□ -1.59
TARDBP-220ENST00000618606 GPR42O15529 346 aa5.14□□□□□ -1.59
TARDBP-220ENST00000618606 NTRK1P04629 796 aa5.14□□□□□ -1.59
TARDBP-220ENST00000618606 GJA8P48165 433 aa5.14□□□□□ -1.59
TARDBP-220ENST00000618606 R3HDM1Q15032 1099 aaKnown RBP5.14□□□□□ -1.59
TARDBP-220ENST00000618606 KIAA1211LQ6NV74 962 aa5.14□□□□□ -1.59
TARDBP-220ENST00000618606 ETV3LQ6ZN32 361 aa5.14□□□□□ -1.59
TARDBP-220ENST00000618606 USP33Q8TEY7 942 aa5.14□□□□□ -1.59
TARDBP-220ENST00000618606 DPF3Q92784 378 aa5.14□□□□□ -1.59
TARDBP-220ENST00000618606 SYT3Q9BQG1 590 aa5.14□□□□□ -1.59
TARDBP-220ENST00000618606 AKT3Q9Y243 479 aa5.14□□□□□ -1.59
TARDBP-220ENST00000618606 EMC9Q9Y3B6 208 aa5.14□□□□□ -1.59
TARDBP-220ENST00000618606 NPEPPSL1A6NEC2 478 aa5.13□□□□□ -1.59
TARDBP-220ENST00000618606 FUCA1P04066 466 aa5.13□□□□□ -1.59
TARDBP-220ENST00000618606 PPP2R5EQ16537 467 aa5.13□□□□□ -1.59
TARDBP-220ENST00000618606 MBLAC2Q68D91 279 aa5.13□□□□□ -1.59
TARDBP-220ENST00000618606 CIR1Q86X95 450 aaPredicted RBP5.13□□□□□ -1.59
TARDBP-220ENST00000618606 MIB1Q86YT6 1006 aa5.13□□□□□ -1.59
TARDBP-220ENST00000618606 APBA2Q99767 749 aa5.13□□□□□ -1.59
TARDBP-220ENST00000618606 SEMA4AQ9H3S1 761 aa5.13□□□□□ -1.59
TARDBP-220ENST00000618606 DEF6Q9H4E7 631 aa5.13□□□□□ -1.59
TARDBP-220ENST00000618606 ING1Q9UK53 422 aaPredicted RBP5.13□□□□□ -1.59
TARDBP-220ENST00000618606 SUGT1Q9Y2Z0 365 aa5.13□□□□□ -1.59
TARDBP-220ENST00000618606 SIT1Q9Y3P8 196 aa5.13□□□□□ -1.59
TARDBP-220ENST00000618606 PLS3P13797 630 aa5.12□□□□□ -1.59
TARDBP-220ENST00000618606 SELENOPP49908 381 aa5.12□□□□□ -1.59
TARDBP-220ENST00000618606 ZNF143P52747 638 aaPredicted RBP5.12□□□□□ -1.59
TARDBP-220ENST00000618606 ITGA1P56199 1179 aa5.12□□□□□ -1.59
TARDBP-220ENST00000618606 ZNF585AQ6P3V2 769 aa5.12□□□□□ -1.59
TARDBP-220ENST00000618606 BVESQ8NE79 360 aa5.12□□□□□ -1.59
TARDBP-220ENST00000618606 SEC16BQ96JE7 1060 aa5.12□□□□□ -1.59
TARDBP-220ENST00000618606 GPRC5CQ9NQ84 441 aa5.12□□□□□ -1.59
TARDBP-220ENST00000618606 CYP26B1Q9NR63 512 aa5.12□□□□□ -1.59
TARDBP-220ENST00000618606 CLEC1BQ9P126 229 aa5.12□□□□□ -1.59
TARDBP-220ENST00000618606 APEX2Q9UBZ4 518 aa5.12□□□□□ -1.59
TARDBP-220ENST00000618606 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.12□□□□□ -1.59
TARDBP-220ENST00000618606 TESMINQ9Y4I5 508 aa5.12□□□□□ -1.59
TARDBP-220ENST00000618606 SGSM2O43147 1006 aa5.11□□□□□ -1.59
TARDBP-220ENST00000618606 KCNH1O95259 989 aa5.11□□□□□ -1.59
TARDBP-220ENST00000618606 NASPP49321 788 aaPredicted RBP5.11□□□□□ -1.59
TARDBP-220ENST00000618606 EPHB4P54760 987 aa5.11□□□□□ -1.59
TARDBP-220ENST00000618606 CYP4F3Q08477 520 aa5.11□□□□□ -1.59
TARDBP-220ENST00000618606 SCRN1Q12765 414 aa5.11□□□□□ -1.59
TARDBP-220ENST00000618606 POMZP3Q6PJE2 187 aa5.11□□□□□ -1.59
TARDBP-220ENST00000618606 VHLLQ6RSH7 139 aa5.11□□□□□ -1.59
TARDBP-220ENST00000618606 CD300LDQ6UXZ3 194 aa5.11□□□□□ -1.59
TARDBP-220ENST00000618606 ZC3H18Q86VM9 953 aaKnown RBP5.11□□□□□ -1.59
TARDBP-220ENST00000618606 DCP2Q8IU60 420 aaKnown RBP5.11□□□□□ -1.59
TARDBP-220ENST00000618606 PALM2Q8IXS6 379 aa5.11□□□□□ -1.59
TARDBP-220ENST00000618606 FAM26EQ8N5C1 309 aa5.11□□□□□ -1.59
TARDBP-220ENST00000618606 FAM169BQ8N8A8 192 aa5.11□□□□□ -1.59
TARDBP-220ENST00000618606 MRGPRX3Q96LB0 322 aa5.11□□□□□ -1.59
TARDBP-220ENST00000618606 WWC2-AS2Q96NR7 200 aa5.11□□□□□ -1.59
TARDBP-220ENST00000618606 TCAF1Q9Y4C2 921 aa5.11□□□□□ -1.59
TARDBP-220ENST00000618606 PATE3B3GLJ2 98 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 MUSKO15146 869 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 THBDP07204 575 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 ZNF28P17035 718 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 MFAP1P55081 439 aaKnown RBP5.1□□□□□ -1.59
TARDBP-220ENST00000618606 TGFB2P61812 414 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 PPP2CBP62714 309 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 PPP2CAP67775 309 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 PURAQ00577 322 aaKnown RBP5.1□□□□□ -1.59
TARDBP-220ENST00000618606 INF2Q27J81 1249 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 SPDYAQ5MJ70 313 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 PKN3Q6P5Z2 889 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 STK32CQ86UX6 486 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 NT5DC4Q86YG4 428 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 TRIM59Q8IWR1 403 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 CRACR2BQ8N4Y2 399 aaPredicted RBP5.1□□□□□ -1.59
TARDBP-220ENST00000618606 IGDCC4Q8TDY8 1250 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 FRS2Q8WU20 508 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 MBD6Q96DN6 1003 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 MARCH2Q9P0N8 246 aa5.1□□□□□ -1.59
TARDBP-220ENST00000618606 C22orf46C9J442 243 aa5.09□□□□□ -1.59
TARDBP-220ENST00000618606 ARNTLO00327 626 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms