RNA–Protein interactions for RNA: ENST00000618449.4

CPEB1-216, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-216ENST00000618449 ABCB11O95342 1321 aa12.66□□□□□ -0.38
CPEB1-216ENST00000618449 PLCG1P19174 1290 aa12.65□□□□□ -0.38
CPEB1-216ENST00000618449 FMR1Q06787 632 aaKnown RBP eCLIP12.65□□□□□ -0.38
CPEB1-216ENST00000618449 PDIA5Q14554 519 aa12.65□□□□□ -0.38
CPEB1-216ENST00000618449 CPXCR1Q8N123 301 aa12.65□□□□□ -0.38
CPEB1-216ENST00000618449 GSDMAQ96QA5 445 aa12.65□□□□□ -0.38
CPEB1-216ENST00000618449 KCNMB3Q9NPA1 279 aa12.65□□□□□ -0.38
CPEB1-216ENST00000618449 FAM86B1E9PN63 330 aa12.65□□□□□ -0.38
CPEB1-216ENST00000618449 GTPBP6O43824 516 aaPredicted RBP12.65□□□□□ -0.38
CPEB1-216ENST00000618449 MARCH6O60337 910 aa12.65□□□□□ -0.38
CPEB1-216ENST00000618449 FAM86B2P0C5J1 330 aa12.65□□□□□ -0.38
CPEB1-216ENST00000618449 PRR16Q569H4 304 aa12.65□□□□□ -0.38
CPEB1-216ENST00000618449 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.65□□□□□ -0.38
CPEB1-216ENST00000618449 KRT26Q7Z3Y9 468 aa12.65□□□□□ -0.38
CPEB1-216ENST00000618449 TEX2Q8IWB9 1127 aa12.65□□□□□ -0.38
CPEB1-216ENST00000618449 CCAR2Q8N163 923 aaKnown RBP12.65□□□□□ -0.38
CPEB1-216ENST00000618449 RAB34Q9BZG1 259 aa12.65□□□□□ -0.38
CPEB1-216ENST00000618449 KCND1Q9NSA2 647 aa12.65□□□□□ -0.38
CPEB1-216ENST00000618449 PCDHA12Q9UN75 941 aa12.65□□□□□ -0.38
CPEB1-216ENST00000618449 PHIPQ8WWQ0 1821 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 NRDCO43847 1150 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 EPHX2P34913 555 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 VSTM4Q8IW00 320 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 TRMT44Q8IYL2 757 aaKnown RBP12.64□□□□□ -0.39
CPEB1-216ENST00000618449 ENOX1Q8TC92 643 aaKnown RBP12.64□□□□□ -0.39
CPEB1-216ENST00000618449 LENG9Q96B70 501 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 C12orf42Q96LP6 360 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 RAVER2Q9HCJ3 691 aaKnown RBP12.64□□□□□ -0.39
CPEB1-216ENST00000618449 KBTBD4Q9NVX7 518 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 NFE2L3Q9Y4A8 694 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 AFG3L2Q9Y4W6 797 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 C19orf81C9J6K1 198 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 CIITAP33076 1130 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 VGLL4Q14135 290 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 Q4G0T1 1027 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 USP50Q70EL3 339 aaPredicted RBP12.64□□□□□ -0.39
CPEB1-216ENST00000618449 TSC1Q92574 1164 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 CALML4Q96GE6 196 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 NUDT12Q9BQG2 462 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 SNCAIPQ9Y6H5 919 aa12.64□□□□□ -0.39
CPEB1-216ENST00000618449 NFIBO00712 420 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 CYP3A4P08684 503 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 ZNF18P17022 549 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 KCNJ6P48051 423 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 MAP3K9P80192 1104 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 GRB10Q13322 594 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 CEP135Q66GS9 1140 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 NYAP1Q6ZVC0 841 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 CYP2W1Q8TAV3 490 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 ETNPPLQ8TBG4 499 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 CLEC4DQ8WXI8 215 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 WNK4Q96J92 1243 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 PNMA5Q96PV4 448 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 CUEDC2Q9H467 287 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 INTS13Q9NVM9 706 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 GLTPD2A6NH11 291 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 VWA5AO00534 786 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 PPP1R12BO60237 982 aaPredicted RBP12.63□□□□□ -0.39
CPEB1-216ENST00000618449 ALAS1P13196 640 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 ERCC5P28715 1186 aaPredicted RBP12.63□□□□□ -0.39
CPEB1-216ENST00000618449 PTPN14Q15678 1187 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 KRT79Q5XKE5 535 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 SNX29Q8TEQ0 813 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 ATG4CQ96DT6 458 aa12.63□□□□□ -0.39
CPEB1-216ENST00000618449 TRMT1Q9NXH9 659 aaKnown RBP12.63□□□□□ -0.39
CPEB1-216ENST00000618449 ZNF76P36508 570 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 HSD17B4P51659 736 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 UBXN2AP68543 259 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 HSP90AA4PQ58FG1 418 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 UTP14CQ5TAP6 766 aaKnown RBP12.62□□□□□ -0.39
CPEB1-216ENST00000618449 SLFN12Q8IYM2 578 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 SMYD4Q8IYR2 804 aaPredicted RBP12.62□□□□□ -0.39
CPEB1-216ENST00000618449 HOMER2Q9NSB8 354 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 PAXBP1Q9Y5B6 917 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 TBX3O15119 743 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 ZBED4O75132 1171 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 RPN1P04843 607 aaKnown RBP12.62□□□□□ -0.39
CPEB1-216ENST00000618449 CD44P16070 742 aaKnown RBP12.62□□□□□ -0.39
CPEB1-216ENST00000618449 MUM1L1Q5H9M0 696 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 CT47A1Q5JQC4 288 aaPredicted RBP12.62□□□□□ -0.39
CPEB1-216ENST00000618449 ZC3H15Q8WU90 426 aaKnown RBP12.62□□□□□ -0.39
CPEB1-216ENST00000618449 CNKSR2Q8WXI2 1034 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 MED15Q96RN5 788 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 MAGEF1Q9HAY2 307 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 TMOD4Q9NZQ9 345 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 CTDP1Q9Y5B0 961 aaPredicted RBP12.62□□□□□ -0.39
CPEB1-216ENST00000618449 SYNRGQ9UMZ2 1314 aa12.62□□□□□ -0.39
CPEB1-216ENST00000618449 PARP14Q460N5 1801 aa12.61□□□□□ -0.39
CPEB1-216ENST00000618449 IGLV3-22A0A075B6J6 115 aa12.61□□□□□ -0.39
CPEB1-216ENST00000618449 MSH4O15457 936 aa12.61□□□□□ -0.39
CPEB1-216ENST00000618449 MYL1P05976 194 aa12.61□□□□□ -0.39
CPEB1-216ENST00000618449 CDK11BP21127 795 aaKnown RBP12.61□□□□□ -0.39
CPEB1-216ENST00000618449 ECM1Q16610 540 aa12.61□□□□□ -0.39
CPEB1-216ENST00000618449 E4F1Q66K89 784 aaPredicted RBP12.61□□□□□ -0.39
CPEB1-216ENST00000618449 CCDC112Q8NEF3 446 aa12.61□□□□□ -0.39
CPEB1-216ENST00000618449 CDCA5Q96FF9 252 aa12.61□□□□□ -0.39
CPEB1-216ENST00000618449 CDK5RAP3Q96JB5 506 aa12.61□□□□□ -0.39
CPEB1-216ENST00000618449 BLOC1S4Q9NUP1 217 aa12.61□□□□□ -0.39
CPEB1-216ENST00000618449 COL20A1Q9P218 1284 aa12.61□□□□□ -0.39
CPEB1-216ENST00000618449 ZC3H4Q9UPT8 1303 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms