RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 COL19A1Q14993 1142 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 LONRF2Q1L5Z9 754 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 CMPK2Q5EBM0 449 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 ARMC3Q5W041 872 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 FAAH2Q6GMR7 532 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 ALKBH2Q6NS38 261 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 CCDC70Q6NSX1 233 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 ATF7IPQ6VMQ6 1270 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 BZW1Q7L1Q6 419 aaKnown RBP3.92□□□□□ -1.78
SMC5-204ENST00000618375 RSRC2Q7L4I2 434 aaKnown RBP3.92□□□□□ -1.78
SMC5-204ENST00000618375 TEX9Q8N6V9 391 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 C1orf127Q8N9H9 656 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 ZBTB8BQ8NAP8 495 aaPredicted RBP3.92□□□□□ -1.78
SMC5-204ENST00000618375 VPS37AQ8NEZ2 397 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 ASAP3Q8TDY4 903 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 USP33Q8TEY7 942 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 UBASH3BQ8TF42 649 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 GTF3C2Q8WUA4 911 aaPredicted RBP3.92□□□□□ -1.78
SMC5-204ENST00000618375 TEKT4Q8WW24 435 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 TAF4BQ92750 862 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 P3H4Q92791 437 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 GCC1Q96CN9 775 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 KLHDC7BQ96G42 594 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 INTS4Q96HW7 963 aaKnown RBP3.92□□□□□ -1.78
SMC5-204ENST00000618375 CDK5RAP3Q96JB5 506 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 SPATA32Q96LK8 384 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 SPAG5Q96R06 1193 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 UBL7Q96S82 380 aaPredicted RBP3.92□□□□□ -1.78
SMC5-204ENST00000618375 IWS1Q96ST2 819 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 LRRCC1Q9C099 1032 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 PCDH18Q9HCL0 1135 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 ZNHIT6Q9NWK9 470 aaKnown RBP3.92□□□□□ -1.78
SMC5-204ENST00000618375 KCNK4Q9NYG8 393 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 RTEL1Q9NZ71 1219 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 CNTN3Q9P232 1028 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 ATXN10Q9UBB4 475 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 HDAC6Q9UBN7 1215 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 HOOK1Q9UJC3 728 aaKnown RBP3.92□□□□□ -1.78
SMC5-204ENST00000618375 RAB21Q9UL25 225 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 PAIP2BQ9ULR5 123 aaKnown RBP3.92□□□□□ -1.78
SMC5-204ENST00000618375 G3BP2Q9UN86 482 aaKnown RBP3.92□□□□□ -1.78
SMC5-204ENST00000618375 MAPK8IP1Q9UQF2 711 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 ZNF148Q9UQR1 794 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 ZDHHC9Q9Y397 364 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 DAAM1Q9Y4D1 1078 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 MRFAP1Q9Y605 127 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 TTC21BQ7Z4L5 1316 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 IFT140Q96RY7 1462 aa3.92□□□□□ -1.78
SMC5-204ENST00000618375 COL17A1Q9UMD9 1497 aaPredicted RBP3.92□□□□□ -1.78
SMC5-204ENST00000618375 WDR62O43379 1518 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 TARSL2A2RTX5 802 aaKnown RBP3.91□□□□□ -1.78
SMC5-204ENST00000618375 B4DLN1 442 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 M0R2C6 588 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 WDR46O15213 610 aaKnown RBP3.91□□□□□ -1.78
SMC5-204ENST00000618375 MEFVO15553 781 aaPredicted RBP3.91□□□□□ -1.78
SMC5-204ENST00000618375 TTI1O43156 1089 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 AP5Z1O43299 807 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 ZSCAN12O43309 604 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 PRC1O43663 620 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 KDM1AO60341 852 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 COBLO75128 1261 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 PHACTR2O75167 634 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 TRPA1O75762 1119 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 SEC31AO94979 1220 aaKnown RBP3.91□□□□□ -1.78
SMC5-204ENST00000618375 MBD4O95243 580 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 ABL1P00519 1130 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 TGFB1P01137 390 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 PDGFAP04085 211 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 TROVE2P10155 538 aaKnown RBP eCLIP3.91□□□□□ -1.78
SMC5-204ENST00000618375 GNAT1P11488 350 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 ACPPP15309 386 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 SMARCA1P28370 1054 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 MZF1P28698 734 aaPredicted RBP3.91□□□□□ -1.78
SMC5-204ENST00000618375 RXRBP28702 533 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 ALDH3A1P30838 453 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 CCT6AP40227 531 aaKnown RBP3.91□□□□□ -1.78
SMC5-204ENST00000618375 MAGEA10P43363 369 aaPredicted RBP3.91□□□□□ -1.78
SMC5-204ENST00000618375 EIF1AXP47813 144 aaKnown RBP3.91□□□□□ -1.78
SMC5-204ENST00000618375 GNAQP50148 359 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 ZNF132P52740 706 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 OXCT1P55809 520 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 EVCP57679 992 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 ARPC4P59998 168 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 PIP4K2BP78356 416 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 CCZ1BP86790 482 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 CCZ1P86791 482 aaPredicted RBP3.91□□□□□ -1.78
SMC5-204ENST00000618375 SULT2A1Q06520 285 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 ACTN3Q08043 901 aaPredicted RBP3.91□□□□□ -1.78
SMC5-204ENST00000618375 LRMPQ12912 555 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 MTMR3Q13615 1198 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 CUL4AQ13619 759 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 TUBB2AQ13885 445 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 RCN1Q15293 331 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 E2F5Q15329 346 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 SGSM1Q2NKQ1 1148 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 CCDC40Q4G0X9 1142 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 PABPC1LQ4VXU2 614 aaKnown RBP3.91□□□□□ -1.78
SMC5-204ENST00000618375 SPDYCQ5MJ68 293 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 SH2D4BQ5SQS7 431 aa3.91□□□□□ -1.78
SMC5-204ENST00000618375 CEP170Q5SW79 1584 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms