RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 NDST4Q9H3R1 872 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 PARP3Q9Y6F1 533 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 MLH3Q9UHC1 1453 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 HGSO14964 777 aaPredicted RBP11.16□□□□□ -0.62
CUL4A-212ENST00000617546 CCND1P24385 295 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 SUGP1Q8IWZ8 645 aaKnown RBP11.16□□□□□ -0.62
CUL4A-212ENST00000617546 SCYL3Q8IZE3 742 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 HPCAL4Q9UM19 191 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 NIP7Q9Y221 180 aaKnown RBP eCLIP11.16□□□□□ -0.62
CUL4A-212ENST00000617546 SYNGAP1Q96PV0 1343 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 C6orf229H3BNL8 230 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 GGPS1O95749 300 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 GARSP41250 739 aaKnown RBP11.16□□□□□ -0.62
CUL4A-212ENST00000617546 VSNL1P62760 191 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 GSDMBQ8TAX9 411 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 CCT6BQ92526 530 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 SERPINI1Q99574 410 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 EFHD1Q9BUP0 239 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.16□□□□□ -0.62
CUL4A-212ENST00000617546 TACC3Q9Y6A5 838 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 UGGT1Q9NYU2 1555 aa11.16□□□□□ -0.62
CUL4A-212ENST00000617546 A0A1B0GTH6 734 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 PLTPP55058 493 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 SPARCL1Q14515 664 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 WDR93Q6P2C0 686 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 RBM43Q6ZSC3 357 aaKnown RBP11.15□□□□□ -0.62
CUL4A-212ENST00000617546 ZNF473Q8WTR7 871 aaKnown RBP11.15□□□□□ -0.62
CUL4A-212ENST00000617546 LRRC59Q96AG4 307 aaKnown RBP11.15□□□□□ -0.62
CUL4A-212ENST00000617546 SPDL1Q96EA4 605 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 ABCA8O94911 1581 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 HIBADHP31937 336 aaKnown RBP11.15□□□□□ -0.62
CUL4A-212ENST00000617546 CCDC93Q567U6 631 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 CADPS2Q86UW7 1296 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 EDC3Q96F86 508 aaKnown RBP11.15□□□□□ -0.62
CUL4A-212ENST00000617546 MXD3Q9BW11 206 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 LGR6Q9HBX8 967 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 LIMA1Q9UHB6 759 aaKnown RBP11.15□□□□□ -0.62
CUL4A-212ENST00000617546 ANAPC5Q9UJX4 755 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 PACSIN2Q9UNF0 486 aaPredicted RBP11.15□□□□□ -0.62
CUL4A-212ENST00000617546 PXDNLA1KZ92 1463 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 TCIRG1Q13488 830 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 CCNI2Q6ZMN8 369 aaPredicted RBP11.15□□□□□ -0.62
CUL4A-212ENST00000617546 HOOK2Q96ED9 719 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 FTOQ9C0B1 505 aaKnown RBP eCLIP11.15□□□□□ -0.62
CUL4A-212ENST00000617546 FHOD1Q9Y613 1164 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 ZWINTO95229 277 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 PCCAP05165 728 aaPredicted RBP11.15□□□□□ -0.62
CUL4A-212ENST00000617546 SERPINB6P35237 376 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 RWDD2BP57060 319 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 SETDB2Q96T68 719 aa11.15□□□□□ -0.62
CUL4A-212ENST00000617546 ELAC2Q9BQ52 826 aaKnown RBP11.15□□□□□ -0.62
CUL4A-212ENST00000617546 PSMD14O00487 310 aa11.15□□□□□ -0.63
CUL4A-212ENST00000617546 PLA2G4AP47712 749 aa11.15□□□□□ -0.63
CUL4A-212ENST00000617546 ATG16L1Q676U5 607 aa11.15□□□□□ -0.63
CUL4A-212ENST00000617546 TTC25Q96NG3 672 aa11.15□□□□□ -0.63
CUL4A-212ENST00000617546 SLC39A2Q9NP94 309 aa11.15□□□□□ -0.63
CUL4A-212ENST00000617546 USP40Q9NVE5 1235 aa11.15□□□□□ -0.63
CUL4A-212ENST00000617546 TUBE1Q9UJT0 475 aa11.15□□□□□ -0.63
CUL4A-212ENST00000617546 CAPN11Q9UMQ6 739 aa11.15□□□□□ -0.63
CUL4A-212ENST00000617546 ARHGAP10A1A4S6 786 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 ABCB4P21439 1286 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 ABCD1P33897 745 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 CDAN1Q8IWY9 1227 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 ZC3H15Q8WU90 426 aaKnown RBP11.14□□□□□ -0.63
CUL4A-212ENST00000617546 NCAPD2Q15021 1401 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 SETBP1Q9Y6X0 1596 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 MFAP3P55082 362 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 ASPHQ12797 758 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 KIFC2Q96AC6 838 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 TMEM232C9JQI7 657 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 ESRRAP11474 423 aaPredicted RBP11.14□□□□□ -0.63
CUL4A-212ENST00000617546 TECP42680 631 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 SLC4A8Q2Y0W8 1093 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 MMGT1Q8N4V1 131 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 WDR24Q96S15 920 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 EIF2AQ9BY44 585 aaKnown RBP11.14□□□□□ -0.63
CUL4A-212ENST00000617546 PITPNM3Q9BZ71 974 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 SCINQ9Y6U3 715 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 ADD2P35612 726 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 PSMC2P35998 433 aaKnown RBP11.14□□□□□ -0.63
CUL4A-212ENST00000617546 BYSLQ13895 437 aaKnown RBP11.14□□□□□ -0.63
CUL4A-212ENST00000617546 CDKL2Q92772 493 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 ZNF594Q96JF6 807 aaPredicted RBP11.14□□□□□ -0.63
CUL4A-212ENST00000617546 ZMAT2Q96NC0 199 aaKnown RBP11.14□□□□□ -0.63
CUL4A-212ENST00000617546 PCDHA12Q9UN75 941 aa11.14□□□□□ -0.63
CUL4A-212ENST00000617546 TRIM66O15016 1216 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 SPAG7O75391 227 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 HNRNPH1P31943 449 aaKnown RBP11.13□□□□□ -0.63
CUL4A-212ENST00000617546 MRPS35P82673 323 aaKnown RBP11.13□□□□□ -0.63
CUL4A-212ENST00000617546 ARHGAP44Q17R89 818 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.13□□□□□ -0.63
CUL4A-212ENST00000617546 SLC30A9Q6PML9 568 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 AGGF1Q8N302 714 aaeCLIP11.13□□□□□ -0.636e-10■■■■■ 30.6
CUL4A-212ENST00000617546 MSL3Q8N5Y2 521 aaKnown RBP11.13□□□□□ -0.63
CUL4A-212ENST00000617546 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.13□□□□□ -0.63
CUL4A-212ENST00000617546 PNPLA6Q8IY17 1366 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 CDC42BPBQ9Y5S2 1711 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 AGTP01019 485 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 INHBAP08476 426 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 DHX34Q14147 1143 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms