RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 GMCL1Q96IK5 515 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 C8orf76Q96K31 380 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 PBX4Q9BYU1 374 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 UPF3AQ9H1J1 476 aaKnown RBP12.36□□□□□ -0.43
COL4A1-205ENST00000615732 ABHD16BQ9H3Z7 469 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 ZSCAN16Q9H4T2 348 aaPredicted RBP12.36□□□□□ -0.43
COL4A1-205ENST00000615732 SPC25Q9HBM1 224 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 IL17RBQ9NRM6 502 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 SYNPO2Q9UMS6 1093 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 ELP1O95163 1332 aa12.36□□□□□ -0.43
COL4A1-205ENST00000615732 CHD7Q9P2D1 2997 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 A0A0U1RQG5 324 aaPredicted RBP12.35□□□□□ -0.43
COL4A1-205ENST00000615732 CCDC196A0A1B0GTZ2 297 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 CTAGE5O15320 804 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 FGRP09769 529 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 CSF2RAP15509 400 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 RXRAP19793 462 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 RCAN1P53805 252 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 GJA9P57773 515 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 DNM1Q05193 864 aaKnown RBP12.35□□□□□ -0.43
COL4A1-205ENST00000615732 PPIGQ13427 754 aaKnown RBP eCLIP12.35□□□□□ -0.43
COL4A1-205ENST00000615732 IFIT1BQ5T764 474 aaKnown RBP12.35□□□□□ -0.43
COL4A1-205ENST00000615732 EEPD1Q7L9B9 569 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 CATIPQ7Z7H3 387 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 TLK2Q86UE8 772 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 FAM160B2Q86V87 743 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 TRERF1Q96PN7 1200 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 PURBQ96QR8 312 aaKnown RBP12.35□□□□□ -0.43
COL4A1-205ENST00000615732 ZSCAN10Q96SZ4 725 aaPredicted RBP12.35□□□□□ -0.43
COL4A1-205ENST00000615732 SENP2Q9HC62 589 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 GDPD2Q9HCC8 539 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 MROH7Q68CQ1 1323 aa12.35□□□□□ -0.43
COL4A1-205ENST00000615732 NID2Q14112 1375 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 ARVCFO00192 962 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 ACRP10323 421 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 SLC16A2P36021 539 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 TNFAIP2Q03169 654 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 SSRP1Q08945 709 aaKnown RBP12.34□□□□□ -0.43
COL4A1-205ENST00000615732 RESTQ13127 1097 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 TRIM29Q14134 588 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 CCDC178Q5BJE1 867 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 TMEM63BQ5T3F8 832 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 CAVIN1Q6NZI2 390 aaKnown RBP12.34□□□□□ -0.43
COL4A1-205ENST00000615732 CXCL17Q6UXB2 119 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 NSMFQ6X4W1 530 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 FAM126BQ8IXS8 530 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 TRIM22Q8IYM9 498 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 ZNF654Q8IZM8 581 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 PCSK9Q8NBP7 692 aaKnown RBP12.34□□□□□ -0.43
COL4A1-205ENST00000615732 CHURC1Q8WUH1 139 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 WASF1Q92558 559 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 SYAP1Q96A49 352 aaPredicted RBP12.34□□□□□ -0.43
COL4A1-205ENST00000615732 MYL10Q9BUA6 226 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 PRDM12Q9H4Q4 367 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 PDGFCQ9NRA1 345 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 CCPG1Q9ULG6 757 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 PRR12Q9ULL5 1215 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 FRMPD2Q68DX3 1309 aaPredicted RBP12.34□□□□□ -0.43
COL4A1-205ENST00000615732 GBF1Q92538 1859 aa12.34□□□□□ -0.43
COL4A1-205ENST00000615732 XIRP2A4UGR9 3374 aa12.33□□□□□ -0.43
COL4A1-205ENST00000615732 REV3LO60673 3130 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 TCHHQ07283 1943 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 PPFIA3O75145 1194 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 CALM1P0DP23 149 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 CALM2P0DP24 149 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 CALM3P0DP25 149 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 SMPD1P17405 629 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 CYP2C18P33260 490 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 GUCY1B3Q02153 619 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 SEC23AQ15436 765 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 L1TD1Q5T7N2 865 aaKnown RBP12.33□□□□□ -0.44
COL4A1-205ENST00000615732 TTBK2Q6IQ55 1244 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 ZNF365Q70YC5 407 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 TMEM199Q8N511 208 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 PPM1EQ8WY54 764 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 ZNF396Q96N95 335 aaPredicted RBP12.33□□□□□ -0.44
COL4A1-205ENST00000615732 ALG1Q9BT22 464 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 SLC26A6Q9BXS9 759 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 CYP39A1Q9NYL5 469 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 UMODL1Q5DID0 1318 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 STK36Q9NRP7 1315 aa12.33□□□□□ -0.44
COL4A1-205ENST00000615732 GOLGA6L3A6NEY3 463 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 ASB14A6NK59 587 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 TNFRSF10AO00220 468 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 NFIBO00712 420 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 DYNC1LI2O43237 492 aaPredicted RBP12.32□□□□□ -0.44
COL4A1-205ENST00000615732 DDAH1O94760 285 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 CD4P01730 458 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 FDX1P10109 184 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 CDC27P30260 824 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 ADD1P35611 737 aaKnown RBP12.32□□□□□ -0.44
COL4A1-205ENST00000615732 UBE2HP62256 183 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 PSMC6P62333 389 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 AKAP17AQ02040 695 aaKnown RBP12.32□□□□□ -0.44
COL4A1-205ENST00000615732 ADGRE1Q14246 886 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 PPP2R5BQ15173 497 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 FSCN1Q16658 493 aaKnown RBP12.32□□□□□ -0.44
COL4A1-205ENST00000615732 TKFCQ3LXA3 575 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 RCSD1Q6JBY9 416 aa12.32□□□□□ -0.44
COL4A1-205ENST00000615732 PSRC1Q6PGN9 363 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms