RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 ZMYND8Q9ULU4 1186 aaPredicted RBP19.24■□□□□ 0.67
CBWD3-211ENST00000615061 NR2E3Q9Y5X4 410 aa19.24■□□□□ 0.67
CBWD3-211ENST00000615061 DTNBO60941 627 aa19.24■□□□□ 0.67
CBWD3-211ENST00000615061 NKX3-2P78367 333 aa19.24■□□□□ 0.67
CBWD3-211ENST00000615061 TTLL4Q14679 1199 aa19.24■□□□□ 0.67
CBWD3-211ENST00000615061 SLC26A6Q9BXS9 759 aa19.24■□□□□ 0.67
CBWD3-211ENST00000615061 ATP11BQ9Y2G3 1177 aa19.24■□□□□ 0.67
CBWD3-211ENST00000615061 Q9Y3F1 56 aa19.24■□□□□ 0.67
CBWD3-211ENST00000615061 FRMPD4Q14CM0 1322 aa19.24■□□□□ 0.67
CBWD3-211ENST00000615061 DOCK5Q9H7D0 1870 aa19.23■□□□□ 0.67
CBWD3-211ENST00000615061 MOXD2PA6NHM9 499 aa19.23■□□□□ 0.67
CBWD3-211ENST00000615061 PRPF3O43395 683 aaKnown RBP19.23■□□□□ 0.67
CBWD3-211ENST00000615061 SCG2P13521 617 aa19.23■□□□□ 0.67
CBWD3-211ENST00000615061 IFNAR1P17181 557 aa19.23■□□□□ 0.67
CBWD3-211ENST00000615061 SYN1P17600 705 aa19.23■□□□□ 0.67
CBWD3-211ENST00000615061 RTP1P59025 263 aa19.23■□□□□ 0.67
CBWD3-211ENST00000615061 MRPS9P82933 396 aaKnown RBP19.23■□□□□ 0.67
CBWD3-211ENST00000615061 TRIM60Q495X7 471 aa19.23■□□□□ 0.67
CBWD3-211ENST00000615061 CXCL17Q6UXB2 119 aa19.23■□□□□ 0.67
CBWD3-211ENST00000615061 PCSK9Q8NBP7 692 aaKnown RBP19.23■□□□□ 0.67
CBWD3-211ENST00000615061 OR6J1Q8NGC5 347 aa19.23■□□□□ 0.67
CBWD3-211ENST00000615061 STARD7Q9NQZ5 370 aa19.23■□□□□ 0.67
CBWD3-211ENST00000615061 CCND2P30279 289 aa19.22■□□□□ 0.67
CBWD3-211ENST00000615061 NEK4P51957 841 aa19.22■□□□□ 0.67
CBWD3-211ENST00000615061 SNX17Q15036 470 aa19.22■□□□□ 0.67
CBWD3-211ENST00000615061 ALDH8A1Q9H2A2 487 aaPredicted RBP19.22■□□□□ 0.67
CBWD3-211ENST00000615061 RTEL1Q9NZ71 1219 aa19.22■□□□□ 0.67
CBWD3-211ENST00000615061 SMCO2A6NFE2 343 aa19.21■□□□□ 0.67
CBWD3-211ENST00000615061 ADAMTS3O15072 1205 aa19.21■□□□□ 0.67
CBWD3-211ENST00000615061 SCRN1Q12765 414 aa19.21■□□□□ 0.67
CBWD3-211ENST00000615061 PPP1R18Q6NYC8 613 aa19.21■□□□□ 0.67
CBWD3-211ENST00000615061 PGBD1Q96JS3 809 aa19.21■□□□□ 0.67
CBWD3-211ENST00000615061 RNF26Q9BY78 433 aaPredicted RBP19.21■□□□□ 0.67
CBWD3-211ENST00000615061 RIC8AQ9NPQ8 531 aa19.21■□□□□ 0.67
CBWD3-211ENST00000615061 DDX41Q9UJV9 622 aaKnown RBP19.21■□□□□ 0.67
CBWD3-211ENST00000615061 MRVI1Q9Y6F6 885 aa19.21■□□□□ 0.67
CBWD3-211ENST00000615061 hCG_1984214I3L0E3 225 aa19.21■□□□□ 0.67
CBWD3-211ENST00000615061 NKRFO15226 690 aaKnown RBP eCLIP19.21■□□□□ 0.67
CBWD3-211ENST00000615061 SORBS3O60504 671 aa19.21■□□□□ 0.67
CBWD3-211ENST00000615061 ZNF713Q8N859 430 aaPredicted RBP19.21■□□□□ 0.67
CBWD3-211ENST00000615061 GLT1D1Q96MS3 346 aa19.21■□□□□ 0.67
CBWD3-211ENST00000615061 PCDHA6Q9UN73 950 aa19.21■□□□□ 0.67
CBWD3-211ENST00000615061 PCDHA8Q9Y5H6 950 aa19.21■□□□□ 0.67
CBWD3-211ENST00000615061 LARGE1O95461 756 aa19.2■□□□□ 0.66
CBWD3-211ENST00000615061 ADCY7P51828 1080 aa19.2■□□□□ 0.66
CBWD3-211ENST00000615061 VTI1AQ96AJ9 217 aa19.2■□□□□ 0.66
CBWD3-211ENST00000615061 KIF2CQ99661 725 aa19.2■□□□□ 0.66
CBWD3-211ENST00000615061 TMEM260Q9NX78 707 aa19.2■□□□□ 0.66
CBWD3-211ENST00000615061 SZT2Q5T011 3432 aa19.2■□□□□ 0.66
CBWD3-211ENST00000615061 CPLX1O14810 134 aa19.19■□□□□ 0.66
CBWD3-211ENST00000615061 AKAP17AQ02040 695 aaKnown RBP19.19■□□□□ 0.66
CBWD3-211ENST00000615061 SP2Q02086 613 aa19.19■□□□□ 0.66
CBWD3-211ENST00000615061 ARHGAP1Q07960 439 aa19.19■□□□□ 0.66
CBWD3-211ENST00000615061 C22orf23Q9BZE7 217 aa19.19■□□□□ 0.66
CBWD3-211ENST00000615061 SLKQ9H2G2 1235 aaPredicted RBP19.19■□□□□ 0.66
CBWD3-211ENST00000615061 ELP1O95163 1332 aa19.19■□□□□ 0.66
CBWD3-211ENST00000615061 SPDYE3A6NKU9 549 aa19.19■□□□□ 0.66
CBWD3-211ENST00000615061 PQBP1O60828 265 aaKnown RBP19.19■□□□□ 0.66
CBWD3-211ENST00000615061 PSMC6P62333 389 aa19.19■□□□□ 0.66
CBWD3-211ENST00000615061 TLE2Q04725 743 aa19.19■□□□□ 0.66
CBWD3-211ENST00000615061 ME3Q16798 604 aa19.19■□□□□ 0.66
CBWD3-211ENST00000615061 C1orf53Q5VUE5 145 aa19.19■□□□□ 0.66
CBWD3-211ENST00000615061 PCNX4Q63HM2 1172 aa19.19■□□□□ 0.66
CBWD3-211ENST00000615061 AFG1LQ8WV93 481 aa19.19■□□□□ 0.66
CBWD3-211ENST00000615061 INPP4AQ96PE3 977 aaPredicted RBP19.19■□□□□ 0.66
CBWD3-211ENST00000615061 BCAS3Q9H6U6 928 aa19.19■□□□□ 0.66
CBWD3-211ENST00000615061 VPS54Q9P1Q0 977 aa19.19■□□□□ 0.66
CBWD3-211ENST00000615061 SCN10AQ9Y5Y9 1956 aa19.18■□□□□ 0.66
CBWD3-211ENST00000615061 A6NJR5 290 aa19.18■□□□□ 0.66
CBWD3-211ENST00000615061 PFKFB2O60825 505 aa19.18■□□□□ 0.66
CBWD3-211ENST00000615061 GH1P01241 217 aa19.18■□□□□ 0.66
CBWD3-211ENST00000615061 MYL3P08590 195 aa19.18■□□□□ 0.66
CBWD3-211ENST00000615061 CPT1AP50416 773 aa19.18■□□□□ 0.66
CBWD3-211ENST00000615061 SEMA3FQ13275 785 aa19.18■□□□□ 0.66
CBWD3-211ENST00000615061 ANKRD1Q15327 319 aa19.18■□□□□ 0.66
CBWD3-211ENST00000615061 NECAB1Q8N987 351 aa19.18■□□□□ 0.66
CBWD3-211ENST00000615061 AIFM3Q96NN9 605 aa19.18■□□□□ 0.66
CBWD3-211ENST00000615061 RBM27Q9P2N5 1060 aaKnown RBP19.18■□□□□ 0.66
CBWD3-211ENST00000615061 GRIN2DO15399 1336 aa19.17■□□□□ 0.66
CBWD3-211ENST00000615061 ZEB2O60315 1214 aa19.17■□□□□ 0.66
CBWD3-211ENST00000615061 UBA1P22314 1058 aaKnown RBP19.17■□□□□ 0.66
CBWD3-211ENST00000615061 CLK2P49760 499 aaKnown RBP19.17■□□□□ 0.66
CBWD3-211ENST00000615061 PURAQ00577 322 aaKnown RBP19.17■□□□□ 0.66
CBWD3-211ENST00000615061 SSRP1Q08945 709 aaKnown RBP19.17■□□□□ 0.66
CBWD3-211ENST00000615061 CHRDL2Q6WN34 429 aa19.17■□□□□ 0.66
CBWD3-211ENST00000615061 SH3RF1Q7Z6J0 888 aa19.17■□□□□ 0.66
CBWD3-211ENST00000615061 PPP1R13LQ8WUF5 828 aa19.17■□□□□ 0.66
CBWD3-211ENST00000615061 ZMYND12Q9H0C1 365 aa19.17■□□□□ 0.66
CBWD3-211ENST00000615061 CTDNEP1O95476 244 aa19.16■□□□□ 0.66
CBWD3-211ENST00000615061 JAKMIP3Q5VZ66 844 aa19.16■□□□□ 0.66
CBWD3-211ENST00000615061 TRIM22Q8IYM9 498 aa19.16■□□□□ 0.66
CBWD3-211ENST00000615061 ANO3Q9BYT9 981 aa19.16■□□□□ 0.66
CBWD3-211ENST00000615061 PRDM5Q9NQX1 630 aaPredicted RBP19.16■□□□□ 0.66
CBWD3-211ENST00000615061 A0A0U1RQG5 324 aaPredicted RBP19.16■□□□□ 0.66
CBWD3-211ENST00000615061 GGPS1O95749 300 aa19.16■□□□□ 0.66
CBWD3-211ENST00000615061 MMP3P08254 477 aa19.16■□□□□ 0.66
CBWD3-211ENST00000615061 CDK7P50613 346 aa19.16■□□□□ 0.66
CBWD3-211ENST00000615061 GNPTABQ3T906 1256 aa19.16■□□□□ 0.66
CBWD3-211ENST00000615061 DHX37Q8IY37 1157 aaKnown RBP19.16■□□□□ 0.66
CBWD3-211ENST00000615061 RASGRP4Q8TDF6 673 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms