RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 ANKLE1Q8NAG6 615 aa13.03□□□□□ -0.32
CCL3L3-201ENST00000612839 IWS1Q96ST2 819 aa13.03□□□□□ -0.32
CCL3L3-201ENST00000612839 MPHOSPH6Q99547 160 aaKnown RBP13.03□□□□□ -0.32
CCL3L3-201ENST00000612839 PDCD2LQ9BRP1 358 aa13.03□□□□□ -0.32
CCL3L3-201ENST00000612839 VTA1Q9NP79 307 aa13.03□□□□□ -0.32
CCL3L3-201ENST00000612839 B4DLN1 442 aa13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 CTDNEP1O95476 244 aa13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 NR3C2P08235 984 aa13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 RARBP10826 455 aa13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 MRPL12P52815 198 aaKnown RBP13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 AKAP17AQ02040 695 aaKnown RBP13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 SSRP1Q08945 709 aaKnown RBP13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 PGM5Q15124 567 aa13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 RABEP1Q15276 862 aa13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 UBE2SQ16763 222 aa13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 TMEM63BQ5T3F8 832 aa13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 IL31RAQ8NI17 732 aa13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 SMARCC2Q8TAQ2 1214 aa13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 DIS3LQ8TF46 1054 aaKnown RBP13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 CUL5Q93034 780 aa13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 GTF3C6Q969F1 213 aa13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 FRMPD4Q14CM0 1322 aa13.02□□□□□ -0.33
CCL3L3-201ENST00000612839 RBM47A0AV96 593 aaKnown RBP13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 SMCO2A6NFE2 343 aa13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 DTNBO60941 627 aa13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 ADAMTS4O75173 837 aa13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 DUSP11O75319 330 aaKnown RBP13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 FARP2O94887 1054 aaPredicted RBP13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 TNFAIP2Q03169 654 aa13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 ST3GAL1Q11201 340 aa13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 STXBP2Q15833 593 aa13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 CPLX2Q6PUV4 134 aaKnown RBP13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 TRIM22Q8IYM9 498 aa13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 RIC8AQ9NPQ8 531 aa13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 XPNPEP3Q9NQH7 507 aa13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 LIMCH1Q9UPQ0 1083 aa13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 GNEQ9Y223 722 aaKnown RBP13.01□□□□□ -0.33
CCL3L3-201ENST00000612839 SYNRGQ9UMZ2 1314 aa13□□□□□ -0.33
CCL3L3-201ENST00000612839 ESYT2A0FGR8 921 aa13□□□□□ -0.33
CCL3L3-201ENST00000612839 CDKL5O76039 1030 aa13□□□□□ -0.33
CCL3L3-201ENST00000612839 DEXIO95424 95 aa13□□□□□ -0.33
CCL3L3-201ENST00000612839 PGK1P00558 417 aa13□□□□□ -0.33
CCL3L3-201ENST00000612839 SMPD1P17405 629 aa13□□□□□ -0.33
CCL3L3-201ENST00000612839 PTGS1P23219 599 aa13□□□□□ -0.33
CCL3L3-201ENST00000612839 IQSEC1Q6DN90 963 aa13□□□□□ -0.33
CCL3L3-201ENST00000612839 VSIG10LQ86VR7 867 aa13□□□□□ -0.33
CCL3L3-201ENST00000612839 PAWRQ96IZ0 340 aaKnown RBP13□□□□□ -0.33
CCL3L3-201ENST00000612839 ZMYND12Q9H0C1 365 aa13□□□□□ -0.33
CCL3L3-201ENST00000612839 STK36Q9NRP7 1315 aa12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 DNM1LO00429 736 aa12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 ADAMTS3O15072 1205 aa12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 EIF3JO75822 258 aaKnown RBP12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 RGS20O76081 388 aa12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 COL6A1P12109 1028 aa12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 MYCLP12524 364 aaPredicted RBP12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 CLK2P49760 499 aaKnown RBP12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 ADCY7P51828 1080 aa12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 MRPS9P82933 396 aaKnown RBP12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 LRRC41Q15345 812 aa12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 GJC2Q5T442 439 aaPredicted RBP12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 TEX2Q8IWB9 1127 aa12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 ARRDC4Q8NCT1 418 aa12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 AIFM3Q96NN9 605 aa12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 WDR11Q9BZH6 1224 aa12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 VPS54Q9P1Q0 977 aa12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 PCDHA6Q9UN73 950 aa12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 PCDHA8Q9Y5H6 950 aa12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 TNRC18O15417 2968 aaPredicted RBP12.99□□□□□ -0.33
CCL3L3-201ENST00000612839 MYADML2A6NDP7 307 aa12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 CTAGE5O15320 804 aa12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 ARIH2O95376 493 aa12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 CD2BP2O95400 341 aaKnown RBP12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 FDPSP14324 419 aaKnown RBP12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 CCND2P30279 289 aa12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 GJA9P57773 515 aa12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 NKX3-2P78367 333 aa12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 MLLT1Q03111 559 aaPredicted RBP12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 DUSP28Q4G0W2 176 aa12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 SEPT14Q6ZU15 432 aa12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 NECAB2Q7Z6G3 386 aa12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 TLK2Q86UE8 772 aa12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 NSUN7Q8NE18 718 aaKnown RBP12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 KLHDC9Q8NEP7 349 aa12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 SCFD2Q8WU76 684 aa12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 CCDC12Q8WUD4 166 aaPredicted RBP12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 GLT8D2Q9H1C3 349 aa12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 UPF3AQ9H1J1 476 aaKnown RBP12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 SH3GLB2Q9NR46 395 aa12.98□□□□□ -0.33
CCL3L3-201ENST00000612839 SPDYE3A6NKU9 549 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 TXNP10599 105 aaKnown RBP12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 PCNX4Q63HM2 1172 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 CCSAPQ6IQ19 270 aaPredicted RBP12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 CCDC62Q6P9F0 684 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 RNF180Q86T96 592 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 IL27Q8NEV9 243 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 CCDC148Q8NFR7 591 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 PGBD1Q96JS3 809 aa12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 ZSCAN31Q96LW9 406 aaPredicted RBP12.97□□□□□ -0.33
CCL3L3-201ENST00000612839 C11orf49Q9H6J7 331 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms