RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 CUL7Q14999 1698 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 BIRC5O15392 142 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 SARS2Q9NP81 518 aaKnown RBP11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PCDHB13Q9Y5F0 798 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 HMGB1P09429 215 aaKnown RBP11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 CYLC1P35663 651 aaPredicted RBP11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 Q6ZUG5 572 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 RFWD2Q8NHY2 731 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 POLE3Q9NRF9 147 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 TMOD3Q9NYL9 352 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 TRMT112Q9UI30 125 aaKnown RBP11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PNMA6EA0A0J9YXQ4 647 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 CCNB2O95067 398 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PRPSAP1Q14558 356 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 CFAP61Q8NHU2 1237 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ZNF507Q8TCN5 953 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 LZTS1Q9Y250 596 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 MYH10P35580 1976 aa11.73□□□□□ -0.53
CNTNAP3B-211ENST00000612828 LCA5LO95447 670 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 KRT4P19013 534 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 SLC9C1Q4G0N8 1177 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 GRAMD4Q6IC98 578 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PRR23CQ6ZRP0 262 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 RSRC2Q7L4I2 434 aaKnown RBP11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 EHBP1Q8NDI1 1231 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PALD1Q9ULE6 856 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 A0A1B0GUA9 196 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ADCY3O60266 1144 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 RASSF2P50749 326 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 SCNN1BP51168 640 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 SEMA3AQ14563 771 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 IFIT1BQ5T764 474 aaKnown RBP11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 FCHSD1Q86WN1 690 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 SLC26A7Q8TE54 656 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 LRRC59Q96AG4 307 aaKnown RBP11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 KRT37O76014 449 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ZFXP17010 805 aaPredicted RBP11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 NEK2P51955 445 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ALDH18A1P54886 795 aaKnown RBP11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 NR5A1Q13285 461 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 KLF18A0A0U1RQI7 1052 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PPP6R2O75170 966 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 LMNB1P20700 586 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 TAF8Q7Z7C8 310 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 NRBF2Q96F24 287 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PRR23AA6NEV1 266 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 GUCA1AP43080 201 aaPredicted RBP11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 THEMIS2Q5TEJ8 643 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ACSBG1Q96GR2 724 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 Q9H521 79 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 hCG_2014768A0A024R1R8 64 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PTPROQ16827 1216 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 CTNNAL1Q9UBT7 734 aa11.72□□□□□ -0.53
CNTNAP3B-211ENST00000612828 SMCO3A2RU48 225 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 RPSAP08865 295 aaKnown RBP11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 HS2ST1Q7LGA3 356 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 EYA1Q99502 592 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 NFIBO00712 420 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 UBXN1Q04323 297 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 IMPG1Q17R60 797 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 GADL1Q6ZQY3 521 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 SULF1Q8IWU6 871 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PBXIP1Q96AQ6 731 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 NDUFB9Q9Y6M9 179 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ZMYM4Q5VZL5 1548 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 DPYSL4O14531 572 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ZNF197O14709 1029 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 GPC4O75487 556 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 FYNP06241 537 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PMLP29590 882 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 LIN9Q5TKA1 542 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 COPS6Q7L5N1 327 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 XAGE3Q8WTP9 111 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 TUFT1Q9NNX1 390 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 BAIAP2L1Q9UHR4 511 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 EPB42P16452 691 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 DDX5P17844 614 aaKnown RBP11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ELF1P32519 619 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 NFIAQ12857 509 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 ITGADQ13349 1161 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PSMB7Q99436 277 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 RERGLQ9H628 205 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 SYCP2Q9BX26 1530 aa11.71□□□□□ -0.53
CNTNAP3B-211ENST00000612828 PDAP1Q13442 181 aaKnown RBP11.71□□□□□ -0.54
CNTNAP3B-211ENST00000612828 LGSNQ5TDP6 509 aa11.71□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TDRD7Q8NHU6 1098 aaKnown RBP11.71□□□□□ -0.54
CNTNAP3B-211ENST00000612828 GLMNQ92990 594 aa11.71□□□□□ -0.54
CNTNAP3B-211ENST00000612828 GAL3ST3Q96A11 431 aa11.71□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TMCC3Q9ULS5 477 aa11.71□□□□□ -0.54
CNTNAP3B-211ENST00000612828 STAG2Q8N3U4 1231 aa11.71□□□□□ -0.54
CNTNAP3B-211ENST00000612828 EPB41P11171 864 aaKnown RBP11.7□□□□□ -0.54
CNTNAP3B-211ENST00000612828 CCDC130P13994 396 aa11.7□□□□□ -0.54
CNTNAP3B-211ENST00000612828 CAMK1Q14012 370 aa11.7□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TAF5Q15542 800 aa11.7□□□□□ -0.54
CNTNAP3B-211ENST00000612828 KRT40Q6A162 431 aa11.7□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TMEM161AQ9NX61 479 aa11.7□□□□□ -0.54
CNTNAP3B-211ENST00000612828 PARP2Q9UGN5 583 aa11.7□□□□□ -0.54
CNTNAP3B-211ENST00000612828 TRIM3O75382 744 aaPredicted RBP11.7□□□□□ -0.54
CNTNAP3B-211ENST00000612828 IFNB1P01574 187 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms