RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 ZNF185O15231 689 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 INPP5BP32019 993 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 GMPSP49915 693 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 ATP1A2P50993 1020 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 GABPAQ06546 454 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 SEPT2Q15019 361 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 SPATA1Q5VX52 437 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 KCNV1Q6PIU1 500 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 GBP6Q6ZN66 633 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 CRACR2AQ9BSW2 395 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 TIAM2Q8IVF5 1701 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 WNT10BO00744 389 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 DDAH1O94760 285 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 CALM1P0DP23 149 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 CALM2P0DP24 149 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 CALM3P0DP25 149 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 KRT2P35908 639 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 PMS1P54277 932 aaKnown RBP13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 NLRP5P59047 1200 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 ACTN3Q08043 901 aaPredicted RBP13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 IL17AQ16552 155 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 CCDC96Q2M329 555 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 RNF187Q5TA31 235 aaPredicted RBP13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 KCTD1Q719H9 257 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 HEATR3Q7Z4Q2 680 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 CEP57Q86XR8 500 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 MICALL2Q8IY33 904 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 CEP112Q8N8E3 955 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 WASF1Q92558 559 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 PCMTD1Q96MG8 357 aaPredicted RBP13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 GMLQ99445 158 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 FOXP1Q9H334 677 aaPredicted RBP13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 DACH1Q9UI36 760 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 RAB21Q9UL25 225 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 FZD1Q9UP38 647 aa13.08□□□□□ -0.31
PPP4R3B-204ENST00000612688 ATP2C2O75185 946 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 RPS6KA5O75582 802 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 KIF5BP33176 963 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 MMP14P50281 582 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 CYP27A1Q02318 531 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 MAP9Q49MG5 647 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 FILIP1LQ4L180 1135 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 TTC38Q5R3I4 469 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 SPICE1Q8N0Z3 855 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 NELFBQ8WX92 580 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 ACBD3Q9H3P7 528 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 MTMR4Q9NYA4 1195 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 SMARCAL1Q9NZC9 954 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 NAV1Q8NEY1 1877 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 GH2P01242 217 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 SETQ01105 290 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 KCTD16Q68DU8 428 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 CAGE1Q8TC20 777 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 SMCR8Q8TEV9 937 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 MYOZ2Q9NPC6 264 aa13.08□□□□□ -0.32
PPP4R3B-204ENST00000612688 KIAA1551Q9HCM1 1747 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 FAM237AA0A1B0GTK4 181 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 CYTH3O43739 400 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 PARP1P09874 1014 aaKnown RBP13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 GNGT1P63211 74 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 JAG1P78504 1218 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 HDLBPQ00341 1268 aaKnown RBP13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 TTBK2Q6IQ55 1244 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 MSANTD4Q8NCY6 345 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 ZNF526Q8TF50 670 aaPredicted RBP13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 MTA3Q9BTC8 594 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 RBM28Q9NW13 759 aaKnown RBP13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 MAD2L2Q9UI95 211 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 ROBO3Q96MS0 1386 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 MACROD2A1Z1Q3 448 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 GOLGA6CA6NDK9 693 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 MYO1BO43795 1136 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 SYF2O95926 243 aaKnown RBP13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 GOLGA6DP0CG33 693 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 SNAP25P60880 206 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 FUT2Q10981 343 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 IKQ13123 557 aaPredicted RBP13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 RRP1BQ14684 758 aaKnown RBP13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 SLC35G1Q2M3R5 365 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 GRIPAP1Q4V328 841 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 IDI2Q9BXS1 227 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 RNF26Q9BY78 433 aaPredicted RBP13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 GOLGA6AQ9NYA3 693 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 CNOT7Q9UIV1 285 aaKnown RBP13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 QSER1Q2KHR3 1735 aa13.07□□□□□ -0.32
PPP4R3B-204ENST00000612688 CNTNAP5Q8WYK1 1306 aa13.06□□□□□ -0.32
PPP4R3B-204ENST00000612688 ZNF541Q9H0D2 1346 aa13.06□□□□□ -0.32
PPP4R3B-204ENST00000612688 FKBP1AP62942 108 aaKnown RBP13.06□□□□□ -0.32
PPP4R3B-204ENST00000612688 STIM1Q13586 685 aa13.06□□□□□ -0.32
PPP4R3B-204ENST00000612688 RPAINQ86UA6 219 aa13.06□□□□□ -0.32
PPP4R3B-204ENST00000612688 ABHD10Q9NUJ1 306 aa13.06□□□□□ -0.32
PPP4R3B-204ENST00000612688 CDK5RAP2Q96SN8 1893 aa13.06□□□□□ -0.32
PPP4R3B-204ENST00000612688 KCNJ18B7U540 433 aa13.06□□□□□ -0.32
PPP4R3B-204ENST00000612688 SKAP2O75563 359 aaPredicted RBP13.06□□□□□ -0.32
PPP4R3B-204ENST00000612688 NEBLO76041 1014 aa13.06□□□□□ -0.32
PPP4R3B-204ENST00000612688 EEF2P13639 858 aaKnown RBP13.06□□□□□ -0.32
PPP4R3B-204ENST00000612688 PRCPP42785 496 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms