RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 KCTD1Q719H9 257 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 ERMP1Q7Z2K6 904 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 SESTD1Q86VW0 696 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 CLASRPQ8N2M8 674 aaKnown RBP12.22□□□□□ -0.45
SSX3-204ENST00000612497 GMCL1Q96IK5 515 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 PUS7LQ9H0K6 701 aaKnown RBP12.22□□□□□ -0.45
SSX3-204ENST00000612497 BOLA2Q9H3K6 86 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 ZNF287Q9HBT7 754 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 PRR12Q9ULL5 1215 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 PLXNA3P51805 1871 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 DCHS1Q96JQ0 3298 aa12.22□□□□□ -0.45
SSX3-204ENST00000612497 RALGAPA2Q2PPJ7 1873 aa12.21□□□□□ -0.45
SSX3-204ENST00000612497 H0Y858 1186 aa12.21□□□□□ -0.45
SSX3-204ENST00000612497 CALML3P27482 149 aa12.21□□□□□ -0.45
SSX3-204ENST00000612497 VCPP55072 806 aaKnown RBP12.21□□□□□ -0.45
SSX3-204ENST00000612497 CTC1Q2NKJ3 1217 aa12.21□□□□□ -0.45
SSX3-204ENST00000612497 ZNF618Q5T7W0 954 aa12.21□□□□□ -0.45
SSX3-204ENST00000612497 FBXO11Q86XK2 927 aa12.21□□□□□ -0.45
SSX3-204ENST00000612497 C7orf31Q8N865 590 aa12.21□□□□□ -0.45
SSX3-204ENST00000612497 RHPN1Q8TCX5 695 aa12.21□□□□□ -0.45
SSX3-204ENST00000612497 AFG1LQ8WV93 481 aa12.21□□□□□ -0.45
SSX3-204ENST00000612497 MPHOSPH6Q99547 160 aaKnown RBP12.21□□□□□ -0.45
SSX3-204ENST00000612497 IGFLR1Q9H665 355 aa12.21□□□□□ -0.45
SSX3-204ENST00000612497 TLR9Q9NR96 1032 aa12.21□□□□□ -0.45
SSX3-204ENST00000612497 CD207Q9UJ71 328 aa12.21□□□□□ -0.45
SSX3-204ENST00000612497 ZNF316A6NFI3 1004 aaPredicted RBP12.2□□□□□ -0.46
SSX3-204ENST00000612497 NFIBO00712 420 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 PLA2G6O60733 806 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 UPP2O95045 317 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 ICAM1P05362 532 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 TSPY3P0CV98 308 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 TSPY8P0CW00 308 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 AVPR2P30518 371 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 HYAL1Q12794 435 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 MBTPS1Q14703 1052 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 HSP90AB4PQ58FF6 505 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 ZKSCAN2Q63HK3 967 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 RCSD1Q6JBY9 416 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 ZSCAN25Q6NSZ9 544 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 DBF4BQ8NFT6 615 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 STRBPQ96SI9 672 aaKnown RBP12.2□□□□□ -0.46
SSX3-204ENST00000612497 ALG13Q9NP73 1137 aaKnown RBP12.2□□□□□ -0.46
SSX3-204ENST00000612497 HDAC6Q9UBN7 1215 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 GTF2IRD1Q9UHL9 959 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 VPS13AQ96RL7 3174 aa12.2□□□□□ -0.46
SSX3-204ENST00000612497 EMSYQ7Z589 1322 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 CACNA1BQ00975 2339 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 GSG1L2A8MUP6 293 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 TBX10O75333 385 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 CSPG5O95196 566 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 MMP3P08254 477 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 CASTP20810 708 aaKnown RBP12.19□□□□□ -0.46
SSX3-204ENST00000612497 PTK7Q13308 1070 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
SSX3-204ENST00000612497 CEP85Q6P2H3 762 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 GIMAP6Q6P9H5 292 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 TRAF7Q6Q0C0 670 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 SLC30A10Q6XR72 485 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 ASCL5Q7RTU5 278 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 ITPRIPQ8IWB1 547 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 NEDD1Q8NHV4 660 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 KAT2BQ92831 832 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 ALG1Q9BT22 464 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 FSD1Q9BTV5 496 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 MTMR7Q9Y216 660 aa12.19□□□□□ -0.46
SSX3-204ENST00000612497 ARIH2O95376 493 aa12.18□□□□□ -0.46
SSX3-204ENST00000612497 CTNNB1P35222 781 aa12.18□□□□□ -0.46
SSX3-204ENST00000612497 GTF2F1P35269 517 aaKnown RBP eCLIP12.18□□□□□ -0.46
SSX3-204ENST00000612497 ID4P47928 161 aa12.18□□□□□ -0.46
SSX3-204ENST00000612497 TDO2P48775 406 aa12.18□□□□□ -0.46
SSX3-204ENST00000612497 TFAP4Q01664 338 aa12.18□□□□□ -0.46
SSX3-204ENST00000612497 SIGLEC14Q08ET2 396 aa12.18□□□□□ -0.46
SSX3-204ENST00000612497 TRIM71Q2Q1W2 868 aaKnown RBP12.18□□□□□ -0.46
SSX3-204ENST00000612497 RNF207Q6ZRF8 634 aa12.18□□□□□ -0.46
SSX3-204ENST00000612497 CHST3Q7LGC8 479 aa12.18□□□□□ -0.46
SSX3-204ENST00000612497 WNT8BQ93098 351 aa12.18□□□□□ -0.46
SSX3-204ENST00000612497 KIF1BPQ96EK5 621 aa12.18□□□□□ -0.46
SSX3-204ENST00000612497 HAUS7Q99871 368 aa12.18□□□□□ -0.46
SSX3-204ENST00000612497 TRPC6Q9Y210 931 aa12.18□□□□□ -0.46
SSX3-204ENST00000612497 MYO15AQ9UKN7 3530 aa12.18□□□□□ -0.46
SSX3-204ENST00000612497 COL4A6Q14031 1691 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 B4DLN1 442 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 PROB1E7EW31 1015 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 GRM6O15303 877 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 LINC01565O15544 149 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 KDM4AO75164 1064 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 GH1P01241 217 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 APPP05067 770 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 ATP5JP18859 108 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 PSEN2P49810 448 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 NDUFV1P49821 464 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 MRPL12P52815 198 aaKnown RBP12.17□□□□□ -0.46
SSX3-204ENST00000612497 ZNF200P98182 395 aaPredicted RBP12.17□□□□□ -0.46
SSX3-204ENST00000612497 CCDC96Q2M329 555 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 FTSJ3Q8IY81 847 aaKnown RBP12.17□□□□□ -0.46
SSX3-204ENST00000612497 TOP1MTQ969P6 601 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 IFIH1Q9BYX4 1025 aaKnown RBP12.17□□□□□ -0.46
SSX3-204ENST00000612497 LMAN2LQ9H0V9 348 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 STX8Q9UNK0 236 aa12.17□□□□□ -0.46
SSX3-204ENST00000612497 MYH7BA7E2Y1 1941 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms