RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 EMILIN3Q9NT22 766 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 ANKFY1Q9P2R3 1169 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 CNOT7Q9UIV1 285 aaKnown RBP8.02□□□□□ -1.13
CSDE1-218ENST00000610726 PPP2R2CQ9Y2T4 447 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 CAMTA1Q9Y6Y1 1673 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 PSMD14O00487 310 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 NFIAQ12857 509 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 ELF2Q15723 593 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 GRIPAP1Q4V328 841 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 HHIPL2Q6UWX4 724 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 U2AF1L4Q8WU68 220 aaKnown RBP8.02□□□□□ -1.13
CSDE1-218ENST00000610726 SLC10A4Q96EP9 437 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 ERO1AQ96HE7 468 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 RIOK1Q9BRS2 568 aaKnown RBP8.02□□□□□ -1.13
CSDE1-218ENST00000610726 FAM107BQ9H098 131 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 PCIF1Q9H4Z3 704 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 MYO1AQ9UBC5 1043 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 HERC5Q9UII4 1024 aaKnown RBP8.02□□□□□ -1.13
CSDE1-218ENST00000610726 HPS5Q9UPZ3 1129 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 E9PMD0 336 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 PRR29P0C7W0 189 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 SRGNP10124 158 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 CCNE1P24864 410 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 VAV2P52735 878 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 ARID5BQ14865 1188 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 EXOC3L4Q17RC7 722 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 ARMC9Q7Z3E5 817 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 SLC7A3Q8WY07 619 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 CCDC51Q96ER9 411 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 EPN1Q9Y6I3 576 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-218ENST00000610726 CEP104O60308 925 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 HSF2BPO75031 334 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 NDUFB10O96000 172 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 U2AF2P26368 475 aaKnown RBP eCLIP8.01□□□□□ -1.132e-12■■■■□ 24.2
CSDE1-218ENST00000610726 ETF1P62495 437 aaKnown RBP8.01□□□□□ -1.13
CSDE1-218ENST00000610726 ZNF543Q08ER8 600 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 AP3B2Q13367 1082 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 USP49Q70CQ1 688 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 CCDC25Q86WR0 208 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 DDX12PQ92771 950 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 PLEKHA4Q9H4M7 779 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 METTL14Q9HCE5 456 aaKnown RBP8.01□□□□□ -1.13
CSDE1-218ENST00000610726 NRBP2Q9NSY0 501 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 ADD3Q9UEY8 706 aaKnown RBP8.01□□□□□ -1.13
CSDE1-218ENST00000610726 POTEB3A0JP26 581 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 POTECB2RU33 542 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 PRPF6O94906 941 aaKnown RBP8.01□□□□□ -1.13
CSDE1-218ENST00000610726 LMAN1P49257 510 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 RBL2Q08999 1139 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 MTERF2Q49AM1 385 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 SNRNP48Q6IEG0 339 aaKnown RBP8.01□□□□□ -1.13
CSDE1-218ENST00000610726 POTEBQ6S5H4 581 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 C16orf86Q6ZW13 317 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 ZBTB8OSQ8IWT0 167 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 KRT222Q8N1A0 295 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 ZNF579Q8NAF0 562 aaKnown RBP8.01□□□□□ -1.13
CSDE1-218ENST00000610726 PRPF38AQ8NAV1 312 aaKnown RBP8.01□□□□□ -1.13
CSDE1-218ENST00000610726 MSANTD4Q8NCY6 345 aa8.01□□□□□ -1.13
CSDE1-218ENST00000610726 TRIM49BA6NDI0 452 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 EEF1GP26641 437 aaKnown RBP8□□□□□ -1.13
CSDE1-218ENST00000610726 GTF2F1P35269 517 aaKnown RBP eCLIP8□□□□□ -1.131e-7■■■■■ 29.4
CSDE1-218ENST00000610726 TNNC1P63316 161 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 CCNA1P78396 465 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 TROAPQ12815 778 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 GOLGA5Q8TBA6 731 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 TMEM39BQ9GZU3 492 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 NUCKS1Q9H1E3 243 aaKnown RBP8□□□□□ -1.13
CSDE1-218ENST00000610726 SLC5A4Q9NY91 659 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 KCNG1Q9UIX4 513 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 USTQ9Y2C2 406 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 TLDC2A0PJX2 215 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 BUB1O43683 1085 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 STAT3P40763 770 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 HMGCS2P54868 508 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 RSBN1LQ6PCB5 846 aaPredicted RBP8□□□□□ -1.13
CSDE1-218ENST00000610726 SAMD7Q7Z3H4 446 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 RNF169Q8NCN4 708 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 SPZ1Q9BXG8 430 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 TRIM31Q9BZY9 425 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 SPON1Q9HCB6 807 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 RNF146Q9NTX7 359 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 RASAL2Q9UJF2 1139 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 SMIM23A6NLE4 172 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 INO80B-WBP1J3KQ70 363 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 ZNF500O60304 480 aaPredicted RBP8□□□□□ -1.13
CSDE1-218ENST00000610726 MYL1P05976 194 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 MYZAPP0CAP1 466 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 DDIT3P35638 169 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 PPP4CP60510 307 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 MAP3K9P80192 1104 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 PDXDC2PQ6P474 469 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 DCUN1D2Q6PH85 259 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 APBB1IPQ7Z5R6 666 aaPredicted RBP8□□□□□ -1.13
CSDE1-218ENST00000610726 ZNF354CQ86Y25 554 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 FAM186BQ8IYM0 893 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 OTUD5Q96G74 571 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 INO80BQ9C086 356 aaPredicted RBP8□□□□□ -1.13
CSDE1-218ENST00000610726 PARVGQ9HBI0 331 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 RIC8AQ9NPQ8 531 aa8□□□□□ -1.13
CSDE1-218ENST00000610726 ZNF70Q9UC06 446 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms