RNA–Protein interactions for RNA: ENST00000610723.4

TPGS2-220, Transcript of tubulin polyglutamylase complex subunit 2, humanhuman

TSL 3 BASIC

Gene TPGS2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS2-220ENST00000610723 ZBTB43O43298 467 aa19■□□□□ 0.63
TPGS2-220ENST00000610723 GH1P01241 217 aa19■□□□□ 0.63
TPGS2-220ENST00000610723 PURAQ00577 322 aaKnown RBP19■□□□□ 0.63
TPGS2-220ENST00000610723 SLC43A3Q8NBI5 491 aa19■□□□□ 0.63
TPGS2-220ENST00000610723 IL31RAQ8NI17 732 aa19■□□□□ 0.63
TPGS2-220ENST00000610723 CUL5Q93034 780 aa19■□□□□ 0.63
TPGS2-220ENST00000610723 A6NJR5 290 aa18.99■□□□□ 0.63
TPGS2-220ENST00000610723 CCND2P30279 289 aa18.99■□□□□ 0.63
TPGS2-220ENST00000610723 BLOC1S2Q6QNY1 142 aa18.99■□□□□ 0.63
TPGS2-220ENST00000610723 VSIG10LQ86VR7 867 aa18.99■□□□□ 0.63
TPGS2-220ENST00000610723 SMARCC2Q8TAQ2 1214 aa18.99■□□□□ 0.63
TPGS2-220ENST00000610723 MTG1Q9BT17 334 aaPredicted RBP18.99■□□□□ 0.63
TPGS2-220ENST00000610723 RBM28Q9NW13 759 aaKnown RBP18.99■□□□□ 0.63
TPGS2-220ENST00000610723 DDX41Q9UJV9 622 aaKnown RBP18.99■□□□□ 0.63
TPGS2-220ENST00000610723 TBX21Q9UL17 535 aa18.99■□□□□ 0.63
TPGS2-220ENST00000610723 GOLGA8AA7E2F4 631 aa18.98■□□□□ 0.63
TPGS2-220ENST00000610723 GOLGA8BA8MQT2 603 aa18.98■□□□□ 0.63
TPGS2-220ENST00000610723 TIMP1P01033 207 aa18.98■□□□□ 0.63
TPGS2-220ENST00000610723 CHMP4BP1P59074 171 aa18.98■□□□□ 0.63
TPGS2-220ENST00000610723 SHHQ15465 462 aa18.98■□□□□ 0.63
TPGS2-220ENST00000610723 RTN1Q16799 776 aa18.98■□□□□ 0.63
TPGS2-220ENST00000610723 LRIT3Q3SXY7 679 aa18.98■□□□□ 0.63
TPGS2-220ENST00000610723 USP17L6PQ6QN14 398 aa18.98■□□□□ 0.63
TPGS2-220ENST00000610723 Q6ZUG5 572 aa18.98■□□□□ 0.63
TPGS2-220ENST00000610723 AFG1LQ8WV93 481 aa18.98■□□□□ 0.63
TPGS2-220ENST00000610723 PPP1R12CQ9BZL4 782 aa18.98■□□□□ 0.63
TPGS2-220ENST00000610723 SORBS3O60504 671 aa18.97■□□□□ 0.63
TPGS2-220ENST00000610723 KPNA6O60684 536 aa18.97■□□□□ 0.63
TPGS2-220ENST00000610723 RGS20O76081 388 aa18.97■□□□□ 0.63
TPGS2-220ENST00000610723 CD4P01730 458 aa18.97■□□□□ 0.63
TPGS2-220ENST00000610723 FPGSQ05932 587 aa18.97■□□□□ 0.63
TPGS2-220ENST00000610723 ARHGAP1Q07960 439 aa18.97■□□□□ 0.63
TPGS2-220ENST00000610723 APOBRQ0VD83 1088 aa18.97■□□□□ 0.63
TPGS2-220ENST00000610723 C9orf50Q5SZB4 431 aa18.97■□□□□ 0.63
TPGS2-220ENST00000610723 HEATR3Q7Z4Q2 680 aa18.97■□□□□ 0.63
TPGS2-220ENST00000610723 PPP1R13LQ8WUF5 828 aa18.97■□□□□ 0.63
TPGS2-220ENST00000610723 SEZ6LQ9BYH1 1024 aa18.97■□□□□ 0.63
TPGS2-220ENST00000610723 TRPV6Q9H1D0 765 aa18.97■□□□□ 0.63
TPGS2-220ENST00000610723 B4GALT4O60513 344 aa18.96■□□□□ 0.63
TPGS2-220ENST00000610723 NBPF20Q3BBV1 942 aa18.96■□□□□ 0.63
TPGS2-220ENST00000610723 FAM47CQ5HY64 1035 aa18.96■□□□□ 0.63
TPGS2-220ENST00000610723 DHX37Q8IY37 1157 aaKnown RBP18.96■□□□□ 0.63
TPGS2-220ENST00000610723 GPKOWQ92917 476 aaPredicted RBP eCLIP18.96■□□□□ 0.63
TPGS2-220ENST00000610723 BRF1Q92994 677 aa18.96■□□□□ 0.63
TPGS2-220ENST00000610723 PSTPIP2Q9H939 334 aa18.96■□□□□ 0.63
TPGS2-220ENST00000610723 CNTNAP5Q8WYK1 1306 aa18.96■□□□□ 0.63
TPGS2-220ENST00000610723 MEIS2O14770 477 aa18.95■□□□□ 0.62
TPGS2-220ENST00000610723 MMP3P08254 477 aa18.95■□□□□ 0.62
TPGS2-220ENST00000610723 CASTP20810 708 aaKnown RBP18.95■□□□□ 0.62
TPGS2-220ENST00000610723 PSMA5P28066 241 aa18.95■□□□□ 0.62
TPGS2-220ENST00000610723 EPHB4P54760 987 aa18.95■□□□□ 0.62
TPGS2-220ENST00000610723 ALDH8A1Q9H2A2 487 aaPredicted RBP18.95■□□□□ 0.62
TPGS2-220ENST00000610723 RTEL1Q9NZ71 1219 aa18.95■□□□□ 0.62
TPGS2-220ENST00000610723 RPS6KB1P23443 525 aa18.94■□□□□ 0.62
TPGS2-220ENST00000610723 CDC27P30260 824 aa18.94■□□□□ 0.62
TPGS2-220ENST00000610723 CYP2C18P33260 490 aa18.94■□□□□ 0.62
TPGS2-220ENST00000610723 METAP2P50579 478 aaKnown RBP eCLIP18.94■□□□□ 0.623e-6■■■□□ 14.9
TPGS2-220ENST00000610723 LAMC2Q13753 1193 aa18.94■□□□□ 0.62
TPGS2-220ENST00000610723 MFSD5Q6N075 450 aa18.94■□□□□ 0.62
TPGS2-220ENST00000610723 KCNV1Q6PIU1 500 aa18.94■□□□□ 0.62
TPGS2-220ENST00000610723 V9GY48 417 aaPredicted RBP18.94■□□□□ 0.62
TPGS2-220ENST00000610723 FRMPD4Q14CM0 1322 aa18.93■□□□□ 0.62
TPGS2-220ENST00000610723 PIK3CDO00329 1044 aa18.93■□□□□ 0.62
TPGS2-220ENST00000610723 GGPS1O95749 300 aa18.93■□□□□ 0.62
TPGS2-220ENST00000610723 MRPS9P82933 396 aaKnown RBP18.93■□□□□ 0.62
TPGS2-220ENST00000610723 UBE2SQ16763 222 aa18.93■□□□□ 0.62
TPGS2-220ENST00000610723 WWC2Q6AWC2 1192 aa18.93■□□□□ 0.62
TPGS2-220ENST00000610723 TMEM199Q8N511 208 aa18.93■□□□□ 0.62
TPGS2-220ENST00000610723 USP26Q9BXU7 913 aa18.93■□□□□ 0.62
TPGS2-220ENST00000610723 HIPK3Q9H422 1215 aa18.93■□□□□ 0.62
TPGS2-220ENST00000610723 FAM217BQ9NTX9 383 aaPredicted RBP18.93■□□□□ 0.62
TPGS2-220ENST00000610723 TRMT13Q9NUP7 481 aaKnown RBP18.93■□□□□ 0.62
TPGS2-220ENST00000610723 ADD1P35611 737 aaKnown RBP18.92■□□□□ 0.62
TPGS2-220ENST00000610723 SP2Q02086 613 aa18.92■□□□□ 0.62
TPGS2-220ENST00000610723 FUT2Q10981 343 aa18.92■□□□□ 0.62
TPGS2-220ENST00000610723 DGKDQ16760 1214 aa18.92■□□□□ 0.62
TPGS2-220ENST00000610723 GNPTABQ3T906 1256 aa18.92■□□□□ 0.62
TPGS2-220ENST00000610723 CELF3Q5SZQ8 465 aaKnown RBP18.92■□□□□ 0.62
TPGS2-220ENST00000610723 EMID1Q96A84 441 aaPredicted RBP18.92■□□□□ 0.62
TPGS2-220ENST00000610723 KIAA1217Q5T5P2 1943 aa18.92■□□□□ 0.62
TPGS2-220ENST00000610723 UMODL1Q5DID0 1318 aa18.92■□□□□ 0.62
TPGS2-220ENST00000610723 EPB41L2O43491 1005 aaKnown RBP18.91■□□□□ 0.62
TPGS2-220ENST00000610723 STAM2O75886 525 aa18.91■□□□□ 0.62
TPGS2-220ENST00000610723 SUPT20HL2P0C7V6 817 aa18.91■□□□□ 0.62
TPGS2-220ENST00000610723 TGFB3P10600 412 aa18.91■□□□□ 0.62
TPGS2-220ENST00000610723 CSF2RAP15509 400 aa18.91■□□□□ 0.62
TPGS2-220ENST00000610723 UBA1P22314 1058 aaKnown RBP18.91■□□□□ 0.62
TPGS2-220ENST00000610723 RCAN1P53805 252 aa18.91■□□□□ 0.62
TPGS2-220ENST00000610723 NAPAP54920 295 aa18.91■□□□□ 0.62
TPGS2-220ENST00000610723 PPIGQ13427 754 aaKnown RBP eCLIP18.91■□□□□ 0.621e-6■■□□□ 13.1
TPGS2-220ENST00000610723 MYSM1Q5VVJ2 828 aa18.91■□□□□ 0.62
TPGS2-220ENST00000610723 NFRKBQ6P4R8 1299 aa18.91■□□□□ 0.62
TPGS2-220ENST00000610723 PPTC7Q8NI37 304 aa18.91■□□□□ 0.62
TPGS2-220ENST00000610723 RNPC3Q96LT9 517 aaKnown RBP18.91■□□□□ 0.62
TPGS2-220ENST00000610723 SPATA33Q96N06 139 aa18.91■□□□□ 0.62
TPGS2-220ENST00000610723 MLXIPQ9HAP2 919 aa18.91■□□□□ 0.62
TPGS2-220ENST00000610723 CYP2C9P11712 490 aa18.91■□□□□ 0.62
TPGS2-220ENST00000610723 CCL23P55773 120 aa18.91■□□□□ 0.62
TPGS2-220ENST00000610723 PCNX4Q63HM2 1172 aa18.91■□□□□ 0.62
TPGS2-220ENST00000610723 RUFY3Q7L099 469 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms