RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 BAIAP3O94812 1187 aa16.21■□□□□ 0.19
MUC1-222ENST00000610468 CA3P07451 260 aa16.21■□□□□ 0.19
MUC1-222ENST00000610468 HOXD8P13378 290 aaPredicted RBP16.21■□□□□ 0.19
MUC1-222ENST00000610468 MRPS5P82675 430 aaKnown RBP16.21■□□□□ 0.19
MUC1-222ENST00000610468 GPNMBQ14956 572 aa16.21■□□□□ 0.19
MUC1-222ENST00000610468 SEC23AQ15436 765 aa16.21■□□□□ 0.19
MUC1-222ENST00000610468 CCDC85BQ15834 202 aaPredicted RBP16.21■□□□□ 0.19
MUC1-222ENST00000610468 PTGISQ16647 500 aa16.21■□□□□ 0.19
MUC1-222ENST00000610468 GDF6Q6KF10 455 aaPredicted RBP16.21■□□□□ 0.19
MUC1-222ENST00000610468 CCDC155Q8N6L0 562 aa16.21■□□□□ 0.19
MUC1-222ENST00000610468 AFAP1L1Q8TED9 768 aa16.21■□□□□ 0.19
MUC1-222ENST00000610468 PXMP2Q9NR77 195 aa16.21■□□□□ 0.19
MUC1-222ENST00000610468 DDX41Q9UJV9 622 aaKnown RBP16.21■□□□□ 0.19
MUC1-222ENST00000610468 NOD1Q9Y239 953 aa16.21■□□□□ 0.19
MUC1-222ENST00000610468 XIRP2A4UGR9 3374 aa16.2■□□□□ 0.18
MUC1-222ENST00000610468 PPP1R11O60927 126 aaPredicted RBP16.2■□□□□ 0.18
MUC1-222ENST00000610468 F2P00734 622 aa16.2■□□□□ 0.18
MUC1-222ENST00000610468 NR3C2P08235 984 aa16.2■□□□□ 0.18
MUC1-222ENST00000610468 EIF2AK2P19525 551 aaKnown RBP16.2■□□□□ 0.18
MUC1-222ENST00000610468 CASTP20810 708 aaKnown RBP16.2■□□□□ 0.18
MUC1-222ENST00000610468 DGKDQ16760 1214 aa16.2■□□□□ 0.18
MUC1-222ENST00000610468 ARHGEF16Q5VV41 709 aa16.2■□□□□ 0.18
MUC1-222ENST00000610468 HERC6Q8IVU3 1022 aa16.2■□□□□ 0.18
MUC1-222ENST00000610468 STAG2Q8N3U4 1231 aa16.2■□□□□ 0.18
MUC1-222ENST00000610468 PPTC7Q8NI37 304 aa16.2■□□□□ 0.18
MUC1-222ENST00000610468 DHX38Q92620 1227 aaKnown RBP16.2■□□□□ 0.18
MUC1-222ENST00000610468 AMNQ9BXJ7 453 aa16.2■□□□□ 0.18
MUC1-222ENST00000610468 TANC1Q9C0D5 1861 aa16.2■□□□□ 0.18
MUC1-222ENST00000610468 DHX16O60231 1041 aaKnown RBP16.19■□□□□ 0.18
MUC1-222ENST00000610468 SELPP16109 830 aa16.19■□□□□ 0.18
MUC1-222ENST00000610468 TAP1Q03518 808 aa16.19■□□□□ 0.18
MUC1-222ENST00000610468 IFIT1BQ5T764 474 aaKnown RBP16.19■□□□□ 0.18
MUC1-222ENST00000610468 STOX1Q6ZVD7 989 aa16.19■□□□□ 0.18
MUC1-222ENST00000610468 SAMD3Q8N6K7 520 aa16.19■□□□□ 0.18
MUC1-222ENST00000610468 ADAMTS19Q8TE59 1207 aa16.19■□□□□ 0.18
MUC1-222ENST00000610468 FTOQ9C0B1 505 aaKnown RBP eCLIP16.19■□□□□ 0.18
MUC1-222ENST00000610468 MAP3K20Q9NYL2 800 aaKnown RBP16.19■□□□□ 0.18
MUC1-222ENST00000610468 GTF2IRD1Q9UHL9 959 aa16.19■□□□□ 0.18
MUC1-222ENST00000610468 PALM3A6NDB9 673 aaPredicted RBP16.18■□□□□ 0.18
MUC1-222ENST00000610468 KLRF2D3W0D1 207 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 HAS3O00219 553 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 ZBTB5O15062 677 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 RGS20O76081 388 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 ARHGEF15O94989 841 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 PARNO95453 639 aaKnown RBP16.18■□□□□ 0.18
MUC1-222ENST00000610468 CFBP00751 764 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 CXCL10P02778 98 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 LAMC2Q13753 1193 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 SLC35G1Q2M3R5 365 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 LRRC8DQ7L1W4 858 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 CHST3Q7LGC8 479 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 PDCD2LQ9BRP1 358 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 KATNAL1Q9BW62 490 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 VAT1LQ9HCJ6 419 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 MAD2L2Q9UI95 211 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 MTCH2Q9Y6C9 303 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 MRVI1Q9Y6F6 885 aa16.18■□□□□ 0.18
MUC1-222ENST00000610468 GBF1Q92538 1859 aa16.17■□□□□ 0.18
MUC1-222ENST00000610468 EPOPA6NHQ4 379 aa16.17■□□□□ 0.18
MUC1-222ENST00000610468 GSPT1P15170 499 aaKnown RBP16.17■□□□□ 0.18
MUC1-222ENST00000610468 PSEN2P49810 448 aa16.17■□□□□ 0.18
MUC1-222ENST00000610468 CHMP4BP1P59074 171 aa16.17■□□□□ 0.18
MUC1-222ENST00000610468 WDR5P61964 334 aaKnown RBP16.17■□□□□ 0.18
MUC1-222ENST00000610468 TRAF7Q6Q0C0 670 aa16.17■□□□□ 0.18
MUC1-222ENST00000610468 CYB5R4Q7L1T6 521 aa16.17■□□□□ 0.18
MUC1-222ENST00000610468 C7orf31Q8N865 590 aa16.17■□□□□ 0.18
MUC1-222ENST00000610468 TSPYL2Q9H2G4 693 aaPredicted RBP16.17■□□□□ 0.18
MUC1-222ENST00000610468 HDAC6Q9UBN7 1215 aa16.17■□□□□ 0.18
MUC1-222ENST00000610468 PCDHA1Q9Y5I3 950 aa16.17■□□□□ 0.18
MUC1-222ENST00000610468 REV3LO60673 3130 aa16.17■□□□□ 0.18
MUC1-222ENST00000610468 KIF28PB7ZC32 967 aa16.16■□□□□ 0.18
MUC1-222ENST00000610468 NBNO60934 754 aa16.16■□□□□ 0.18
MUC1-222ENST00000610468 ZNF286BP0CG31 522 aa16.16■□□□□ 0.18
MUC1-222ENST00000610468 CKBP12277 381 aa16.16■□□□□ 0.18
MUC1-222ENST00000610468 PTK7Q13308 1070 aa16.16■□□□□ 0.18
MUC1-222ENST00000610468 MFSD10Q14728 455 aa16.16■□□□□ 0.18
MUC1-222ENST00000610468 TRIM71Q2Q1W2 868 aaKnown RBP16.16■□□□□ 0.18
MUC1-222ENST00000610468 MYSM1Q5VVJ2 828 aa16.16■□□□□ 0.18
MUC1-222ENST00000610468 CNKSR3Q6P9H4 555 aa16.16■□□□□ 0.18
MUC1-222ENST00000610468 KCNV1Q6PIU1 500 aa16.16■□□□□ 0.18
MUC1-222ENST00000610468 VSIG10LQ86VR7 867 aa16.16■□□□□ 0.18
MUC1-222ENST00000610468 UHRF1Q96T88 793 aaPredicted RBP16.16■□□□□ 0.18
MUC1-222ENST00000610468 BDP1A6H8Y1 2624 aa16.16■□□□□ 0.18
MUC1-222ENST00000610468 RFXAPO00287 272 aa16.15■□□□□ 0.18
MUC1-222ENST00000610468 GTPBP6O43824 516 aaPredicted RBP16.15■□□□□ 0.18
MUC1-222ENST00000610468 PPFIA4O75335 1185 aa16.15■□□□□ 0.18
MUC1-222ENST00000610468 BMP1P13497 986 aa16.15■□□□□ 0.18
MUC1-222ENST00000610468 PDE4AP27815 886 aa16.15■□□□□ 0.18
MUC1-222ENST00000610468 HOXA13P31271 388 aaPredicted RBP16.15■□□□□ 0.18
MUC1-222ENST00000610468 KCNJ6P48051 423 aa16.15■□□□□ 0.18
MUC1-222ENST00000610468 TRAF1Q13077 416 aa16.15■□□□□ 0.18
MUC1-222ENST00000610468 SCN5AQ14524 2016 aa16.15■□□□□ 0.18
MUC1-222ENST00000610468 GRM4Q14833 912 aa16.15■□□□□ 0.18
MUC1-222ENST00000610468 KIAA0753Q2KHM9 967 aa16.15■□□□□ 0.18
MUC1-222ENST00000610468 CELF3Q5SZQ8 465 aaKnown RBP16.15■□□□□ 0.18
MUC1-222ENST00000610468 TTC22Q5TAA0 569 aa16.15■□□□□ 0.18
MUC1-222ENST00000610468 DHX37Q8IY37 1157 aaKnown RBP16.15■□□□□ 0.18
MUC1-222ENST00000610468 IL31RAQ8NI17 732 aa16.15■□□□□ 0.18
MUC1-222ENST00000610468 RIOX1Q9H6W3 641 aa16.15■□□□□ 0.18
MUC1-222ENST00000610468 CERS4Q9HA82 394 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms