RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 TMTC3Q6ZXV5 915 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 FBXL16Q8N461 479 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 LRRC2Q9BYS8 371 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 PCDH10Q9P2E7 1040 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 FRMPD4Q14CM0 1322 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 CCDC196A0A1B0GTZ2 297 aa17.41■□□□□ 0.38
LMBR1-220ENST00000609081 FPGSQ05932 587 aa17.41■□□□□ 0.38
LMBR1-220ENST00000609081 LAMC2Q13753 1193 aa17.41■□□□□ 0.38
LMBR1-220ENST00000609081 COL9A3Q14050 684 aaPredicted RBP17.41■□□□□ 0.38
LMBR1-220ENST00000609081 GNPTABQ3T906 1256 aa17.41■□□□□ 0.38
LMBR1-220ENST00000609081 BLOC1S2Q6QNY1 142 aa17.41■□□□□ 0.38
LMBR1-220ENST00000609081 SMARCC2Q8TAQ2 1214 aa17.41■□□□□ 0.38
LMBR1-220ENST00000609081 DDX41Q9UJV9 622 aaKnown RBP17.41■□□□□ 0.38
LMBR1-220ENST00000609081 MRVI1Q9Y6F6 885 aa17.41■□□□□ 0.38
LMBR1-220ENST00000609081 hCG_1984214I3L0E3 225 aa17.4■□□□□ 0.38
LMBR1-220ENST00000609081 ARIH2O95376 493 aa17.4■□□□□ 0.38
LMBR1-220ENST00000609081 MYL3P08590 195 aa17.4■□□□□ 0.38
LMBR1-220ENST00000609081 MYCLP12524 364 aaPredicted RBP17.4■□□□□ 0.38
LMBR1-220ENST00000609081 RXRAP19793 462 aa17.4■□□□□ 0.38
LMBR1-220ENST00000609081 CASTP20810 708 aaKnown RBP17.4■□□□□ 0.38
LMBR1-220ENST00000609081 PTPN11Q06124 597 aaPredicted RBP17.4■□□□□ 0.38
LMBR1-220ENST00000609081 ARHGAP1Q07960 439 aa17.4■□□□□ 0.38
LMBR1-220ENST00000609081 RTN1Q16799 776 aa17.4■□□□□ 0.38
LMBR1-220ENST00000609081 MFSD5Q6N075 450 aa17.4■□□□□ 0.38
LMBR1-220ENST00000609081 NFRKBQ6P4R8 1299 aa17.4■□□□□ 0.38
LMBR1-220ENST00000609081 FCHSD1Q86WN1 690 aa17.4■□□□□ 0.38
LMBR1-220ENST00000609081 TMEM199Q8N511 208 aa17.4■□□□□ 0.38
LMBR1-220ENST00000609081 ZNF713Q8N859 430 aaPredicted RBP17.4■□□□□ 0.38
LMBR1-220ENST00000609081 PIBF1Q8WXW3 757 aa17.4■□□□□ 0.38
LMBR1-220ENST00000609081 SNX14Q9Y5W7 946 aa17.4■□□□□ 0.38
LMBR1-220ENST00000609081 MYH7BA7E2Y1 1941 aa17.39■□□□□ 0.37
LMBR1-220ENST00000609081 EIF5BO60841 1220 aaKnown RBP17.39■□□□□ 0.37
LMBR1-220ENST00000609081 PTGS1P23219 599 aa17.39■□□□□ 0.37
LMBR1-220ENST00000609081 PPIGQ13427 754 aaKnown RBP eCLIP17.39■□□□□ 0.37
LMBR1-220ENST00000609081 DGKDQ16760 1214 aa17.39■□□□□ 0.37
LMBR1-220ENST00000609081 LY6KQ17RY6 165 aa17.39■□□□□ 0.37
LMBR1-220ENST00000609081 DHX37Q8IY37 1157 aaKnown RBP17.39■□□□□ 0.37
LMBR1-220ENST00000609081 PPTC7Q8NI37 304 aa17.39■□□□□ 0.37
LMBR1-220ENST00000609081 COPS5Q92905 334 aa17.39■□□□□ 0.37
LMBR1-220ENST00000609081 JAKMIP1Q96N16 626 aaKnown RBP17.39■□□□□ 0.37
LMBR1-220ENST00000609081 PSTPIP2Q9H939 334 aa17.39■□□□□ 0.37
LMBR1-220ENST00000609081 SZT2Q5T011 3432 aa17.39■□□□□ 0.37
LMBR1-220ENST00000609081 GRIN2DO15399 1336 aa17.39■□□□□ 0.37
LMBR1-220ENST00000609081 KLF18A0A0U1RQI7 1052 aa17.38■□□□□ 0.37
LMBR1-220ENST00000609081 MMP3P08254 477 aa17.38■□□□□ 0.37
LMBR1-220ENST00000609081 ITGB8P26012 769 aa17.38■□□□□ 0.37
LMBR1-220ENST00000609081 PSMC6P62333 389 aa17.38■□□□□ 0.37
LMBR1-220ENST00000609081 PPP1R18Q6NYC8 613 aa17.38■□□□□ 0.37
LMBR1-220ENST00000609081 AFG1LQ8WV93 481 aa17.38■□□□□ 0.37
LMBR1-220ENST00000609081 KATNAL1Q9BW62 490 aa17.38■□□□□ 0.37
LMBR1-220ENST00000609081 GLT8D2Q9H1C3 349 aa17.38■□□□□ 0.37
LMBR1-220ENST00000609081 ALDH8A1Q9H2A2 487 aaPredicted RBP17.38■□□□□ 0.37
LMBR1-220ENST00000609081 BRPF3Q9ULD4 1205 aa17.38■□□□□ 0.37
LMBR1-220ENST00000609081 GOLGA8AA7E2F4 631 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 GOLGA8BA8MQT2 603 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 SOX1O00570 391 aaPredicted RBP17.37■□□□□ 0.37
LMBR1-220ENST00000609081 MEIS2O14770 477 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 PPFIA4O75335 1185 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 RGS20O76081 388 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 RPS6KB1P23443 525 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 ICAM3P32942 547 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 SHHQ15465 462 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 PCNX4Q63HM2 1172 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 CMTR1Q8N1G2 835 aaKnown RBP17.37■□□□□ 0.37
LMBR1-220ENST00000609081 TCEANC2Q96MN5 208 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 INPP4AQ96PE3 977 aaPredicted RBP17.37■□□□□ 0.37
LMBR1-220ENST00000609081 AGXT2Q9BYV1 514 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 HIPK3Q9H422 1215 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 EHMT1Q9H9B1 1298 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 CNTNAP5Q8WYK1 1306 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 NID2Q14112 1375 aa17.37■□□□□ 0.37
LMBR1-220ENST00000609081 SPDYE3A6NKU9 549 aa17.36■□□□□ 0.37
LMBR1-220ENST00000609081 FIBPO43427 364 aa17.36■□□□□ 0.37
LMBR1-220ENST00000609081 B4GALT4O60513 344 aa17.36■□□□□ 0.37
LMBR1-220ENST00000609081 HOXD8P13378 290 aaPredicted RBP17.36■□□□□ 0.37
LMBR1-220ENST00000609081 NBPF20Q3BBV1 942 aa17.36■□□□□ 0.37
LMBR1-220ENST00000609081 CELF3Q5SZQ8 465 aaKnown RBP17.36■□□□□ 0.37
LMBR1-220ENST00000609081 MYSM1Q5VVJ2 828 aa17.36■□□□□ 0.37
LMBR1-220ENST00000609081 USP17L6PQ6QN14 398 aa17.36■□□□□ 0.37
LMBR1-220ENST00000609081 Q6ZUG5 572 aa17.36■□□□□ 0.37
LMBR1-220ENST00000609081 HEATR3Q7Z4Q2 680 aa17.36■□□□□ 0.37
LMBR1-220ENST00000609081 SESTD1Q86VW0 696 aa17.36■□□□□ 0.37
LMBR1-220ENST00000609081 RAB11FIP4Q86YS3 637 aa17.36■□□□□ 0.37
LMBR1-220ENST00000609081 CCDC82Q8N4S0 544 aa17.36■□□□□ 0.37
LMBR1-220ENST00000609081 IL31RAQ8NI17 732 aa17.36■□□□□ 0.37
LMBR1-220ENST00000609081 LRCH3Q96II8 777 aa17.36■□□□□ 0.37
LMBR1-220ENST00000609081 CDHR1Q96JP9 859 aa17.36■□□□□ 0.37
LMBR1-220ENST00000609081 METAP2P50579 478 aaKnown RBP eCLIP17.35■□□□□ 0.37
LMBR1-220ENST00000609081 FUT2Q10981 343 aa17.35■□□□□ 0.37
LMBR1-220ENST00000609081 NEDD9Q14511 834 aa17.35■□□□□ 0.37
LMBR1-220ENST00000609081 FAM109BQ6ICB4 259 aaPredicted RBP17.35■□□□□ 0.37
LMBR1-220ENST00000609081 PSRC1Q6PGN9 363 aaPredicted RBP17.35■□□□□ 0.37
LMBR1-220ENST00000609081 NLRX1Q86UT6 975 aa17.35■□□□□ 0.37
LMBR1-220ENST00000609081 GIMAP8Q8ND71 665 aaPredicted RBP17.35■□□□□ 0.37
LMBR1-220ENST00000609081 BRF1Q92994 677 aa17.35■□□□□ 0.37
LMBR1-220ENST00000609081 SENP7Q9BQF6 1050 aa17.35■□□□□ 0.37
LMBR1-220ENST00000609081 TM6SF1Q9BZW5 370 aa17.35■□□□□ 0.37
LMBR1-220ENST00000609081 GGPS1O95749 300 aa17.34■□□□□ 0.37
LMBR1-220ENST00000609081 FOSP01100 380 aaPredicted RBP17.34■□□□□ 0.37
LMBR1-220ENST00000609081 UBA1P22314 1058 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms