RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 FAM47CQ5HY64 1035 aa16.69■□□□□ 0.26
HDDC2-204ENST00000608295 IWS1Q96ST2 819 aa16.69■□□□□ 0.26
HDDC2-204ENST00000608295 USP26Q9BXU7 913 aa16.69■□□□□ 0.26
HDDC2-204ENST00000608295 NCOA5Q9HCD5 579 aaKnown RBP16.69■□□□□ 0.26
HDDC2-204ENST00000608295 RTEL1Q9NZ71 1219 aa16.69■□□□□ 0.26
HDDC2-204ENST00000608295 ELP1O95163 1332 aa16.69■□□□□ 0.26
HDDC2-204ENST00000608295 RANBP2P49792 3224 aaKnown RBP16.68■□□□□ 0.26
HDDC2-204ENST00000608295 RBAK-RBAKDNI3L0D1 243 aa16.68■□□□□ 0.26
HDDC2-204ENST00000608295 ARVCFO00192 962 aa16.68■□□□□ 0.26
HDDC2-204ENST00000608295 SOX1O00570 391 aaPredicted RBP16.68■□□□□ 0.26
HDDC2-204ENST00000608295 RGS20O76081 388 aa16.68■□□□□ 0.26
HDDC2-204ENST00000608295 GH1P01241 217 aa16.68■□□□□ 0.26
HDDC2-204ENST00000608295 RAG1P15918 1043 aa16.68■□□□□ 0.26
HDDC2-204ENST00000608295 PSMA5P28066 241 aa16.68■□□□□ 0.26
HDDC2-204ENST00000608295 CPT1AP50416 773 aa16.68■□□□□ 0.26
HDDC2-204ENST00000608295 GHRHRQ02643 423 aa16.68■□□□□ 0.26
HDDC2-204ENST00000608295 FAAP100Q0VG06 881 aa16.68■□□□□ 0.26
HDDC2-204ENST00000608295 ITGA7Q13683 1181 aa16.68■□□□□ 0.26
HDDC2-204ENST00000608295 C1orf53Q5VUE5 145 aa16.68■□□□□ 0.26
HDDC2-204ENST00000608295 TYW1BQ6NUM6 668 aa16.68■□□□□ 0.26
HDDC2-204ENST00000608295 LRCH3Q96II8 777 aa16.68■□□□□ 0.26
HDDC2-204ENST00000608295 FAM217BQ9NTX9 383 aaPredicted RBP16.68■□□□□ 0.26
HDDC2-204ENST00000608295 V9GY48 417 aaPredicted RBP16.68■□□□□ 0.26
HDDC2-204ENST00000608295 GRIN2DO15399 1336 aa16.68■□□□□ 0.26
HDDC2-204ENST00000608295 MEIS2O14770 477 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 NKRFO15226 690 aaKnown RBP eCLIP16.67■□□□□ 0.26
HDDC2-204ENST00000608295 DTNBO60941 627 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 EIF3JO75822 258 aaKnown RBP16.67■□□□□ 0.26
HDDC2-204ENST00000608295 MMP3P08254 477 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 ZNF286BP0CG31 522 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 SMARCA1P28370 1054 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 PURAQ00577 322 aaKnown RBP16.67■□□□□ 0.26
HDDC2-204ENST00000608295 SP4Q02446 784 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 ARHGAP1Q07960 439 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 STK3Q13188 491 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 CCDC62Q6P9F0 684 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 FAM126BQ8IXS8 530 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 PHKBQ93100 1093 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 TRPV6Q9H1D0 765 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 PSTPIP2Q9H939 334 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 PKD2L1Q9P0L9 805 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 Q9Y3F1 56 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 SCN10AQ9Y5Y9 1956 aa16.67■□□□□ 0.26
HDDC2-204ENST00000608295 TLR3O15455 904 aaKnown RBP16.66■□□□□ 0.26
HDDC2-204ENST00000608295 B4GALT4O60513 344 aa16.66■□□□□ 0.26
HDDC2-204ENST00000608295 GGPS1O95749 300 aa16.66■□□□□ 0.26
HDDC2-204ENST00000608295 UBA1P22314 1058 aaKnown RBP16.66■□□□□ 0.26
HDDC2-204ENST00000608295 NKX3-2P78367 333 aa16.66■□□□□ 0.26
HDDC2-204ENST00000608295 FUT2Q10981 343 aa16.66■□□□□ 0.26
HDDC2-204ENST00000608295 TOB2Q14106 344 aaPredicted RBP16.66■□□□□ 0.26
HDDC2-204ENST00000608295 BRDTQ58F21 947 aaPredicted RBP16.66■□□□□ 0.26
HDDC2-204ENST00000608295 RUFY3Q7L099 469 aa16.66■□□□□ 0.26
HDDC2-204ENST00000608295 ANKRD33Q7Z3H0 272 aa16.66■□□□□ 0.26
HDDC2-204ENST00000608295 TDHQ8IZJ6 230 aa16.66■□□□□ 0.26
HDDC2-204ENST00000608295 MTG1Q9BT17 334 aaPredicted RBP16.66■□□□□ 0.26
HDDC2-204ENST00000608295 BCAS3Q9H6U6 928 aa16.66■□□□□ 0.26
HDDC2-204ENST00000608295 TRMT13Q9NUP7 481 aaKnown RBP16.66■□□□□ 0.26
HDDC2-204ENST00000608295 POLR3EQ9NVU0 708 aa16.66■□□□□ 0.26
HDDC2-204ENST00000608295 DDX41Q9UJV9 622 aaKnown RBP16.66■□□□□ 0.26
HDDC2-204ENST00000608295 CYP46A1Q9Y6A2 500 aa16.66■□□□□ 0.26
HDDC2-204ENST00000608295 UMODL1Q5DID0 1318 aa16.66■□□□□ 0.26
HDDC2-204ENST00000608295 MROH7Q68CQ1 1323 aa16.66■□□□□ 0.26
HDDC2-204ENST00000608295 STXBP3O00186 592 aa16.65■□□□□ 0.26
HDDC2-204ENST00000608295 CABYRO75952 493 aa16.65■□□□□ 0.26
HDDC2-204ENST00000608295 CYP2C18P33260 490 aa16.65■□□□□ 0.26
HDDC2-204ENST00000608295 CDK7P50613 346 aa16.65■□□□□ 0.26
HDDC2-204ENST00000608295 MRPS9P82933 396 aaKnown RBP16.65■□□□□ 0.26
HDDC2-204ENST00000608295 C9orf50Q5SZB4 431 aa16.65■□□□□ 0.26
HDDC2-204ENST00000608295 VSIG10LQ86VR7 867 aa16.65■□□□□ 0.26
HDDC2-204ENST00000608295 DHX37Q8IY37 1157 aaKnown RBP16.65■□□□□ 0.26
HDDC2-204ENST00000608295 MAF1Q9H063 256 aa16.65■□□□□ 0.26
HDDC2-204ENST00000608295 TMEM260Q9NX78 707 aa16.65■□□□□ 0.26
HDDC2-204ENST00000608295 MAP3K20Q9NYL2 800 aaKnown RBP16.65■□□□□ 0.26
HDDC2-204ENST00000608295 TBX21Q9UL17 535 aa16.65■□□□□ 0.26
HDDC2-204ENST00000608295 FRMPD4Q14CM0 1322 aa16.65■□□□□ 0.26
HDDC2-204ENST00000608295 SPDYE3A6NKU9 549 aa16.64■□□□□ 0.25
HDDC2-204ENST00000608295 CYP2C9P11712 490 aa16.64■□□□□ 0.25
HDDC2-204ENST00000608295 ADCY7P51828 1080 aa16.64■□□□□ 0.25
HDDC2-204ENST00000608295 EPHB4P54760 987 aa16.64■□□□□ 0.25
HDDC2-204ENST00000608295 SP2Q02086 613 aa16.64■□□□□ 0.25
HDDC2-204ENST00000608295 NBPF20Q3BBV1 942 aa16.64■□□□□ 0.25
HDDC2-204ENST00000608295 ALG1Q9BT22 464 aa16.64■□□□□ 0.25
HDDC2-204ENST00000608295 SLC26A6Q9BXS9 759 aa16.64■□□□□ 0.25
HDDC2-204ENST00000608295 ZSWIM6Q9HCJ5 1215 aa16.64■□□□□ 0.25
HDDC2-204ENST00000608295 PDRG1Q9NUG6 133 aa16.64■□□□□ 0.25
HDDC2-204ENST00000608295 SCN5AQ14524 2016 aa16.63■□□□□ 0.25
HDDC2-204ENST00000608295 A6NJR5 290 aa16.63■□□□□ 0.25
HDDC2-204ENST00000608295 KIAA0355O15063 1070 aa16.63■□□□□ 0.25
HDDC2-204ENST00000608295 SEC24BO95487 1268 aa16.63■□□□□ 0.25
HDDC2-204ENST00000608295 BMP8BP34820 402 aa16.63■□□□□ 0.25
HDDC2-204ENST00000608295 CCL23P55773 120 aa16.63■□□□□ 0.25
HDDC2-204ENST00000608295 SEMA3FQ13275 785 aa16.63■□□□□ 0.25
HDDC2-204ENST00000608295 SHHQ15465 462 aa16.63■□□□□ 0.25
HDDC2-204ENST00000608295 SAMD3Q8N6K7 520 aa16.63■□□□□ 0.25
HDDC2-204ENST00000608295 SPATA33Q96N06 139 aa16.63■□□□□ 0.25
HDDC2-204ENST00000608295 TOX2Q96NM4 488 aa16.63■□□□□ 0.25
HDDC2-204ENST00000608295 ALDH8A1Q9H2A2 487 aaPredicted RBP16.63■□□□□ 0.25
HDDC2-204ENST00000608295 PCDHA6Q9UN73 950 aa16.63■□□□□ 0.25
HDDC2-204ENST00000608295 TELO2Q9Y4R8 837 aa16.63■□□□□ 0.25
HDDC2-204ENST00000608295 PCDHA8Q9Y5H6 950 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms