RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 SYMPKQ92797 1274 aaKnown RBP28.29■■■□□ 2.12
SNX5-219ENST00000606602 MTMR8Q96EF0 704 aa28.29■■■□□ 2.12
SNX5-219ENST00000606602 FTOQ9C0B1 505 aaKnown RBP eCLIP28.29■■■□□ 2.12
SNX5-219ENST00000606602 PRDM6Q9NQX0 595 aa28.29■■■□□ 2.12
SNX5-219ENST00000606602 DDX41Q9UJV9 622 aaKnown RBP28.29■■■□□ 2.12
SNX5-219ENST00000606602 PCDHA1Q9Y5I3 950 aa28.29■■■□□ 2.12
SNX5-219ENST00000606602 MRVI1Q9Y6F6 885 aa28.29■■■□□ 2.12
SNX5-219ENST00000606602 U3KPZ7 1027 aaPredicted RBP28.29■■■□□ 2.12
SNX5-219ENST00000606602 PALM3A6NDB9 673 aaPredicted RBP28.28■■■□□ 2.12
SNX5-219ENST00000606602 PPP1R11O60927 126 aaPredicted RBP28.28■■■□□ 2.12
SNX5-219ENST00000606602 DGKDQ16760 1214 aa28.28■■■□□ 2.12
SNX5-219ENST00000606602 IFIT3O14879 490 aaKnown RBP28.27■■■□□ 2.12
SNX5-219ENST00000606602 CYP21A2P08686 494 aa28.27■■■□□ 2.12
SNX5-219ENST00000606602 PTH1RQ03431 593 aa28.27■■■□□ 2.12
SNX5-219ENST00000606602 CCDC85BQ15834 202 aaPredicted RBP28.27■■■□□ 2.12
SNX5-219ENST00000606602 HOMER1Q86YM7 354 aa28.27■■■□□ 2.12
SNX5-219ENST00000606602 CCDC155Q8N6L0 562 aa28.27■■■□□ 2.12
SNX5-219ENST00000606602 KAT2BQ92831 832 aa28.27■■■□□ 2.12
SNX5-219ENST00000606602 MYCLP12524 364 aaPredicted RBP28.26■■■□□ 2.11
SNX5-219ENST00000606602 CHMLP26374 656 aa28.26■■■□□ 2.11
SNX5-219ENST00000606602 GHRHRQ02643 423 aa28.26■■■□□ 2.11
SNX5-219ENST00000606602 GDF6Q6KF10 455 aaPredicted RBP28.26■■■□□ 2.11
SNX5-219ENST00000606602 SESTD1Q86VW0 696 aa28.26■■■□□ 2.11
SNX5-219ENST00000606602 MAP3K20Q9NYL2 800 aaKnown RBP28.26■■■□□ 2.11
SNX5-219ENST00000606602 ERICH2A1L162 156 aa28.25■■■□□ 2.11
SNX5-219ENST00000606602 HOXA13P31271 388 aaPredicted RBP28.25■■■□□ 2.11
SNX5-219ENST00000606602 LAMC2Q13753 1193 aa28.25■■■□□ 2.11
SNX5-219ENST00000606602 GRM4Q14833 912 aa28.25■■■□□ 2.11
SNX5-219ENST00000606602 TMEM67Q5HYA8 995 aa28.25■■■□□ 2.11
SNX5-219ENST00000606602 TJAP1Q5JTD0 557 aa28.25■■■□□ 2.11
SNX5-219ENST00000606602 RALYLQ86SE5 291 aaKnown RBP28.25■■■□□ 2.11
SNX5-219ENST00000606602 DHX37Q8IY37 1157 aaKnown RBP28.25■■■□□ 2.11
SNX5-219ENST00000606602 EMID1Q96A84 441 aaPredicted RBP28.25■■■□□ 2.11
SNX5-219ENST00000606602 PDCD2LQ9BRP1 358 aa28.25■■■□□ 2.11
SNX5-219ENST00000606602 SPTBN5Q9NRC6 3674 aaKnown RBP28.25■■■□□ 2.11
SNX5-219ENST00000606602 TRAF1Q13077 416 aa28.24■■■□□ 2.11
SNX5-219ENST00000606602 STOX1Q6ZVD7 989 aa28.24■■■□□ 2.11
SNX5-219ENST00000606602 C7orf31Q8N865 590 aa28.24■■■□□ 2.11
SNX5-219ENST00000606602 CAGE1Q8TC20 777 aa28.24■■■□□ 2.11
SNX5-219ENST00000606602 CTAGE1Q96RT6 745 aa28.24■■■□□ 2.11
SNX5-219ENST00000606602 PIGSQ96S52 555 aa28.24■■■□□ 2.11
SNX5-219ENST00000606602 SLC9A7Q96T83 725 aa28.24■■■□□ 2.11
SNX5-219ENST00000606602 PSEN2P49810 448 aa28.23■■■□□ 2.11
SNX5-219ENST00000606602 WTAPQ15007 396 aa28.23■■■□□ 2.11
SNX5-219ENST00000606602 SLC35G1Q2M3R5 365 aa28.23■■■□□ 2.11
SNX5-219ENST00000606602 SAMD3Q8N6K7 520 aa28.23■■■□□ 2.11
SNX5-219ENST00000606602 PPTC7Q8NI37 304 aa28.23■■■□□ 2.11
SNX5-219ENST00000606602 AFAP1L1Q8TED9 768 aa28.23■■■□□ 2.11
SNX5-219ENST00000606602 ALG1Q9BT22 464 aa28.23■■■□□ 2.11
SNX5-219ENST00000606602 SENP2Q9HC62 589 aa28.23■■■□□ 2.11
SNX5-219ENST00000606602 CHD7Q9P2D1 2997 aa28.23■■■□□ 2.11
SNX5-219ENST00000606602 HDAC6Q9UBN7 1215 aa28.23■■■□□ 2.11
SNX5-219ENST00000606602 GTF2IRD1Q9UHL9 959 aa28.23■■■□□ 2.11
SNX5-219ENST00000606602 TAF6LQ9Y6J9 622 aa28.23■■■□□ 2.11
SNX5-219ENST00000606602 E7EWF7 191 aa28.22■■■□□ 2.11
SNX5-219ENST00000606602 CA3P07451 260 aa28.22■■■□□ 2.11
SNX5-219ENST00000606602 SART3Q15020 963 aaKnown RBP28.22■■■□□ 2.11
SNX5-219ENST00000606602 NCOA7Q8NI08 942 aa28.22■■■□□ 2.11
SNX5-219ENST00000606602 PHOSPHO2Q8TCD6 241 aa28.22■■■□□ 2.11
SNX5-219ENST00000606602 KATNAL1Q9BW62 490 aa28.22■■■□□ 2.11
SNX5-219ENST00000606602 RIOX1Q9H6W3 641 aa28.22■■■□□ 2.11
SNX5-219ENST00000606602 GCOM1H8Y6P7 765 aaPredicted RBP28.21■■■□□ 2.11
SNX5-219ENST00000606602 RGS20O76081 388 aa28.21■■■□□ 2.11
SNX5-219ENST00000606602 POLR2MP0CAP2 368 aa28.21■■■□□ 2.11
SNX5-219ENST00000606602 ZNF286BP0CG31 522 aa28.21■■■□□ 2.11
SNX5-219ENST00000606602 MFSD10Q14728 455 aa28.21■■■□□ 2.11
SNX5-219ENST00000606602 PGM5Q15124 567 aa28.21■■■□□ 2.11
SNX5-219ENST00000606602 KCNV1Q6PIU1 500 aa28.21■■■□□ 2.11
SNX5-219ENST00000606602 VSIG10LQ86VR7 867 aa28.21■■■□□ 2.11
SNX5-219ENST00000606602 ATXN2LQ8WWM7 1075 aaKnown RBP28.21■■■□□ 2.11
SNX5-219ENST00000606602 DHX38Q92620 1227 aaKnown RBP28.21■■■□□ 2.11
SNX5-219ENST00000606602 THEGQ9P2T0 379 aa28.21■■■□□ 2.11
SNX5-219ENST00000606602 SCN5AQ14524 2016 aa28.2■■■□□ 2.11
SNX5-219ENST00000606602 SORBS3O60504 671 aa28.2■■■□□ 2.1
SNX5-219ENST00000606602 F2P00734 622 aa28.2■■■□□ 2.1
SNX5-219ENST00000606602 SELPP16109 830 aa28.2■■■□□ 2.1
SNX5-219ENST00000606602 IRX6P78412 446 aaPredicted RBP28.2■■■□□ 2.1
SNX5-219ENST00000606602 KIAA0753Q2KHM9 967 aa28.2■■■□□ 2.1
SNX5-219ENST00000606602 LRRC8DQ7L1W4 858 aa28.2■■■□□ 2.1
SNX5-219ENST00000606602 FCHSD1Q86WN1 690 aa28.2■■■□□ 2.1
SNX5-219ENST00000606602 HERC6Q8IVU3 1022 aa28.2■■■□□ 2.1
SNX5-219ENST00000606602 IL31RAQ8NI17 732 aa28.2■■■□□ 2.1
SNX5-219ENST00000606602 GBF1Q92538 1859 aa28.2■■■□□ 2.1
SNX5-219ENST00000606602 PNMA6FA0A0J9YX94 578 aa28.19■■■□□ 2.1
SNX5-219ENST00000606602 SGSM2O43147 1006 aa28.19■■■□□ 2.1
SNX5-219ENST00000606602 CYTH3O43739 400 aa28.19■■■□□ 2.1
SNX5-219ENST00000606602 BAIAP3O94812 1187 aa28.19■■■□□ 2.1
SNX5-219ENST00000606602 TROAPQ12815 778 aa28.19■■■□□ 2.1
SNX5-219ENST00000606602 MYSM1Q5VVJ2 828 aa28.19■■■□□ 2.1
SNX5-219ENST00000606602 CATIPQ7Z7H3 387 aa28.19■■■□□ 2.1
SNX5-219ENST00000606602 ZFP91Q96JP5 570 aaPredicted RBP28.19■■■□□ 2.1
SNX5-219ENST00000606602 SPATA33Q96N06 139 aa28.19■■■□□ 2.1
SNX5-219ENST00000606602 MYH6P13533 1939 aa28.18■■■□□ 2.1
SNX5-219ENST00000606602 KIF28PB7ZC32 967 aa28.18■■■□□ 2.1
SNX5-219ENST00000606602 HAS3O00219 553 aa28.18■■■□□ 2.1
SNX5-219ENST00000606602 PPFIA4O75335 1185 aa28.18■■■□□ 2.1
SNX5-219ENST00000606602 GGPS1O95749 300 aa28.18■■■□□ 2.1
SNX5-219ENST00000606602 CCND2P30279 289 aa28.18■■■□□ 2.1
SNX5-219ENST00000606602 KCNJ6P48051 423 aa28.18■■■□□ 2.1
SNX5-219ENST00000606602 CELF3Q5SZQ8 465 aaKnown RBP28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms