RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 FKBP15Q5T1M5 1219 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 CCDC174Q6PII3 467 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 CYP26C1Q6V0L0 522 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 CACNA2D4Q7Z3S7 1137 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 FAM20CQ8IXL6 584 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 RASEFQ8IZ41 740 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 RBM46Q8TBY0 533 aaKnown RBP9.7□□□□□ -0.86
COMMD3-215ENST00000602574 HAUS1Q96CS2 278 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 MAELQ96JY0 434 aaKnown RBP9.7□□□□□ -0.86
COMMD3-215ENST00000602574 UROC1Q96N76 676 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 GPR108Q9NPR9 543 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 CTTNBP2NLQ9P2B4 639 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 DSEQ9UL01 958 aa9.7□□□□□ -0.86
COMMD3-215ENST00000602574 ARHGAP5Q13017 1502 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 AKAP12Q02952 1782 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 CDC42BPGQ6DT37 1551 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 GOLGA8TH3BQL2 631 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 KMOO15229 486 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 ASAP2O43150 1006 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 GOLGA8HP0CJ92 632 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 SCG2P13521 617 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 PDCLQ13371 301 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 MTMR3Q13615 1198 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 CRY1Q16526 586 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 IMMTQ16891 758 aaKnown RBP9.69□□□□□ -0.86
COMMD3-215ENST00000602574 GLE1Q53GS7 698 aaKnown RBP9.69□□□□□ -0.86
COMMD3-215ENST00000602574 FAM117BQ6P1L5 589 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 ARHGEF18Q6ZSZ5 1173 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 CDKL2Q92772 493 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 GPATCH3Q96I76 525 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 CEP295NLQ96MC4 621 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 LARSQ9P2J5 1176 aaKnown RBP9.69□□□□□ -0.86
COMMD3-215ENST00000602574 SNX9Q9Y5X1 595 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 QRICH2Q9H0J4 1663 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 GAKO14976 1311 aa9.69□□□□□ -0.86
COMMD3-215ENST00000602574 ZNF254O75437 659 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 CYP2C9P11712 490 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 CD9P21926 228 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 RXRBP28702 533 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 PIK3CAP42336 1068 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 USP14P54578 494 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 ARL13BQ3SXY8 428 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 FOXB2Q5VYV0 432 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 DHX40Q8IX18 779 aaKnown RBP9.68□□□□□ -0.86
COMMD3-215ENST00000602574 ALDH16A1Q8IZ83 802 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 TCP11L2Q8N4U5 519 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 DNAJC5Q9H3Z4 198 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 QTRT2Q9H974 415 aaKnown RBP9.68□□□□□ -0.86
COMMD3-215ENST00000602574 STAP2Q9UGK3 403 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 CHMP2BQ9UQN3 213 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 LZTS1Q9Y250 596 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 GIT1Q9Y2X7 761 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 POGZQ7Z3K3 1410 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 NEK4P51957 841 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 B2MP61769 119 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 MCL1Q07820 350 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 PPP1R7Q15435 360 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 SYCP2LQ5T4T6 812 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 RNF220Q5VTB9 566 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 CACNA2D3Q8IZS8 1091 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 SPARTQ8N0X7 666 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 ARL6IP6Q8N6S5 226 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 RETREG2Q8NC44 543 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 CCDC12Q8WUD4 166 aaPredicted RBP9.68□□□□□ -0.86
COMMD3-215ENST00000602574 ERP27Q96DN0 273 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 IQCDQ96DY2 449 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 MED30Q96HR3 178 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 PSKH2Q96QS6 385 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 RPS6KC1Q96S38 1066 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 SPATA16Q9BXB7 569 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 FTOQ9C0B1 505 aaKnown RBP eCLIP9.68□□□□□ -0.86
COMMD3-215ENST00000602574 ALDH8A1Q9H2A2 487 aaPredicted RBP9.68□□□□□ -0.86
COMMD3-215ENST00000602574 CRNNQ9UBG3 495 aaPredicted RBP9.68□□□□□ -0.86
COMMD3-215ENST00000602574 MKL2Q9ULH7 1088 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 PPP1R9AQ9ULJ8 1098 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 ABCC3O15438 1527 aa9.68□□□□□ -0.86
COMMD3-215ENST00000602574 KIF28PB7ZC32 967 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 KCNJ13O60928 360 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 CBFA2T3O75081 653 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 KRT4P19013 534 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 ATP5DP30049 168 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 MXI1P50539 228 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 KRT85P78386 507 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 NONOQ15233 471 aaKnown RBP eCLIP9.67□□□□□ -0.86
COMMD3-215ENST00000602574 C15orf59Q2T9L4 293 aaPredicted RBP9.67□□□□□ -0.86
COMMD3-215ENST00000602574 CNPY1Q3B7I2 92 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 WDR45BQ5MNZ6 344 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 TTC22Q5TAA0 569 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 TCERG1LQ5VWI1 586 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 ATL3Q6DD88 541 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 MAP7D3Q8IWC1 876 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 ARFGAP2Q8N6H7 521 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 KIAA1958Q8N8K9 716 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 MLKLQ8NB16 471 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 TNIP2Q8NFZ5 429 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 FAM136AQ96C01 138 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 GBP5Q96PP8 586 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 PDGFDQ9GZP0 370 aaPredicted RBP9.67□□□□□ -0.86
COMMD3-215ENST00000602574 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.67□□□□□ -0.86
COMMD3-215ENST00000602574 IL1RAPL1Q9NZN1 696 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms